Cow genome map

Conread name: Ss1.1-rcol1026b_k12.5

Conread position: 1-194
Cow position:
Alignm length: 199
Alignm identity: 146
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 30, 118

Conread position: 13-203
Cow position:
Alignm length: 194
Alignm identity: 147
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 20, 40

Conread position: 18-162
Cow position:
Alignm length: 147
Alignm identity: 109
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 100, 25

Conread position: 23-203
Cow position:
Alignm length: 186
Alignm identity: 141
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 66, 0

Conread position: 26-194
Cow position:
Alignm length: 173
Alignm identity: 136
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 96, 5

Conread position: 30-208
Cow position:
Alignm length: 184
Alignm identity: 136
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 11, 135

Conread position: 30-209
Cow position:
Alignm length: 183
Alignm identity: 135
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 11, 0

Conread position: 33-197
Cow position:
Alignm length: 167
Alignm identity: 129
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 21, 17

Conread position: 35-190
Cow position:
Alignm length: 157
Alignm identity: 118
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 121, 78

Conread position: 37-193
Cow position:
Alignm length: 159
Alignm identity: 123
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 21, 80

Conread position: 37-194
Cow position:
Alignm length: 159
Alignm identity: 119
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 118, 83

Conread position: 37-203
Cow position:
Alignm length: 170
Alignm identity: 128
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 73, 0

Conread position: 37-203
Cow position:
Alignm length: 170
Alignm identity: 131
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 78, 127

Conread position: 37-203
Cow position:
Alignm length: 168
Alignm identity: 124
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 116, 73

Conread position: 37-203
Cow position:
Alignm length: 168
Alignm identity: 134
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 118, 0

Conread position: 37-204
Cow position:
Alignm length: 171
Alignm identity: 131
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 118, 46

Conread position: 38-203
Cow position:
Alignm length: 167
Alignm identity: 121
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 117, 60

Conread position: 40-203
Cow position:
Alignm length: 165
Alignm identity: 128
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 115, 11

Conread position: 43-194
Cow position:
Alignm length: 156
Alignm identity: 116
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 82, 0

Conread position: 45-203
Cow position:
Alignm length: 160
Alignm identity: 126
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 110, 78

Conread position: 47-202
Cow position:
Alignm length: 157
Alignm identity: 112
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 102, 73

Conread position: 49-197
Cow position:
Alignm length: 150
Alignm identity: 116
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 106, 67

Conread position: 50-197
Cow position:
Alignm length: 152
Alignm identity: 121
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 65, 0

Conread position: 51-179
Cow position:
Alignm length: 131
Alignm identity: 104
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 104, 65

Conread position: 51-200
Cow position:
Alignm length: 155
Alignm identity: 123
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 65, 0

Conread position: 51-201
Cow position:
Alignm length: 154
Alignm identity: 122
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 67, 24

Conread position: 51-203
Cow position:
Alignm length: 155
Alignm identity: 115
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 11, 66

Conread position: 51-203
Cow position:
Alignm length: 154
Alignm identity: 116
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 106, 71

Conread position: 51-203
Cow position:
Alignm length: 154
Alignm identity: 117
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 7, 66

Conread position: 51-205
Cow position:
Alignm length: 158
Alignm identity: 117
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 106, 59

Conread position: 52-193
Cow position:
Alignm length: 143
Alignm identity: 116
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 103, 59

Conread position: 52-194
Cow position:
Alignm length: 144
Alignm identity: 105
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 103, 64

Conread position: 52-202
Cow position:
Alignm length: 151
Alignm identity: 116
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 15, 0

Conread position: 52-203
Cow position:
Alignm length: 153
Alignm identity: 114
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 103, 64

Conread position: 52-203
Cow position:
Alignm length: 155
Alignm identity: 116
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 80, 56

Conread position: 52-203
Cow position:
Alignm length: 154
Alignm identity: 118
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 63, 78

Conread position: 52-203
Cow position:
Alignm length: 152
Alignm identity: 117
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 64, 0

Conread position: 52-203
Cow position:
Alignm length: 159
Alignm identity: 123
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 64, 0

Conread position: 52-203
Cow position:
Alignm length: 153
Alignm identity: 119
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 103, 98

Conread position: 52-203
Cow position:
Alignm length: 153
Alignm identity: 114
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 103, 65

Conread position: 52-205
Cow position:
Alignm length: 159
Alignm identity: 125
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 104, 62

Conread position: 52-206
Cow position:
Alignm length: 158
Alignm identity: 121
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 63, 0

Conread position: 52-206
Cow position:
Alignm length: 157
Alignm identity: 121
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 108, 70

Conread position: 52-208
Cow position:
Alignm length: 160
Alignm identity: 123
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 66, 88

Conread position: 53-203
Cow position:
Alignm length: 152
Alignm identity: 117
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 103, 63

Conread position: 54-172
Cow position:
Alignm length: 122
Alignm identity: 98
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 70, 0

Conread position: 54-173
Cow position:
Alignm length: 121
Alignm identity: 96
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 100, 62

Conread position: 54-181
Cow position:
Alignm length: 129
Alignm identity: 107
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 101, 0

Conread position: 54-193
Cow position:
Alignm length: 142
Alignm identity: 110
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 101, 62

Conread position: 54-193
Cow position:
Alignm length: 145
Alignm identity: 113
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 47, 56

Conread position: 54-197
Cow position:
Alignm length: 146
Alignm identity: 117
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 61, 67

Conread position: 54-198
Cow position:
Alignm length: 151
Alignm identity: 115
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 70, 0

Conread position: 54-202
Cow position:
Alignm length: 150
Alignm identity: 124
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 100, 61

Conread position: 54-203
Cow position:
Alignm length: 150
Alignm identity: 119
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 94, 0

Conread position: 54-203
Cow position:
Alignm length: 157
Alignm identity: 124
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 62, 122

Conread position: 54-203
Cow position:
Alignm length: 153
Alignm identity: 115
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 68, 0

Conread position: 54-203
Cow position:
Alignm length: 161
Alignm identity: 120
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 56, 0

Conread position: 54-203
Cow position:
Alignm length: 152
Alignm identity: 109
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 58, 0

Conread position: 54-203
Cow position:
Alignm length: 151
Alignm identity: 121
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 100, 0

Conread position: 54-207
Cow position:
Alignm length: 157
Alignm identity: 123
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 101, 66

Conread position: 54-226
Cow position:
Alignm length: 177
Alignm identity: 135
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 61, 98

Conread position: 55-203
Cow position:
Alignm length: 151
Alignm identity: 120
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 60, 0

Conread position: 55-203
Cow position:
Alignm length: 153
Alignm identity: 119
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 11, 15

Conread position: 55-203
Cow position:
Alignm length: 150
Alignm identity: 115
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 99, 5

Conread position: 57-159
Cow position:
Alignm length: 106
Alignm identity: 88
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 63, 0

Conread position: 57-161
Cow position:
Alignm length: 107
Alignm identity: 91
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 57, 0

Conread position: 57-172
Cow position:
Alignm length: 121
Alignm identity: 96
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 47, 0

Conread position: 57-176
Cow position:
Alignm length: 121
Alignm identity: 97
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 98, 66

Conread position: 57-191
Cow position:
Alignm length: 137
Alignm identity: 106
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 56, 125

Conread position: 57-194
Cow position:
Alignm length: 139
Alignm identity: 111
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 98, 0

Conread position: 57-197
Cow position:
Alignm length: 143
Alignm identity: 115
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 62, 0

Conread position: 57-197
Cow position:
Alignm length: 142
Alignm identity: 113
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 98, 108

Conread position: 57-197
Cow position:
Alignm length: 142
Alignm identity: 111
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 98, 0

Conread position: 57-197
Cow position:
Alignm length: 142
Alignm identity: 113
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 92, 59

Conread position: 57-202
Cow position:
Alignm length: 151
Alignm identity: 121
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 59, 48

Conread position: 57-203
Cow position:
Alignm length: 151
Alignm identity: 116
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 47, 0

Conread position: 57-203
Cow position:
Alignm length: 152
Alignm identity: 119
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 59, 0

Conread position: 57-203
Cow position:
Alignm length: 154
Alignm identity: 114
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 59, 45

Conread position: 57-203
Cow position:
Alignm length: 148
Alignm identity: 117
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 98, 60

Conread position: 57-203
Cow position:
Alignm length: 148
Alignm identity: 108
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 118, 0

Conread position: 57-203
Cow position:
Alignm length: 149
Alignm identity: 116
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 55, 42

Conread position: 57-203
Cow position:
Alignm length: 153
Alignm identity: 120
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 60, 119

Conread position: 57-203
Cow position:
Alignm length: 148
Alignm identity: 125
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 98, 59

Conread position: 57-203
Cow position:
Alignm length: 147
Alignm identity: 115
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 59, 0

Conread position: 57-203
Cow position:
Alignm length: 151
Alignm identity: 120
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 10, 117

Conread position: 57-203
Cow position:
Alignm length: 150
Alignm identity: 121
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 9, 0

Conread position: 57-203
Cow position:
Alignm length: 147
Alignm identity: 113
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 54, 0

Conread position: 57-203
Cow position:
Alignm length: 152
Alignm identity: 116
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 58, 0

Conread position: 57-205
Cow position:
Alignm length: 157
Alignm identity: 124
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 61, 0

Conread position: 57-205
Cow position:
Alignm length: 151
Alignm identity: 125
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 61, 0

Conread position: 57-205
Cow position:
Alignm length: 152
Alignm identity: 118
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 40, 44

Conread position: 57-207
Cow position:
Alignm length: 153
Alignm identity: 114
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 92, 0

Conread position: 57-209
Cow position:
Alignm length: 160
Alignm identity: 131
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 56, 44

Conread position: 57-209
Cow position:
Alignm length: 155
Alignm identity: 120
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 58, 121

Conread position: 57-211
Cow position:
Alignm length: 158
Alignm identity: 125
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 58, 98

Conread position: 58-193
Cow position:
Alignm length: 138
Alignm identity: 108
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 48, 22

Conread position: 58-194
Cow position:
Alignm length: 137
Alignm identity: 110
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 52, 0

Conread position: 58-195
Cow position:
Alignm length: 142
Alignm identity: 110
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 63, 0

Conread position: 58-203
Cow position:
Alignm length: 148
Alignm identity: 119
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 57, 75

Conread position: 58-205
Cow position:
Alignm length: 153
Alignm identity: 113
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 61, 0

Conread position: 59-210
Cow position:
Alignm length: 153
Alignm identity: 118
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 96, 28

Conread position: 59-211
Cow position:
Alignm length: 155
Alignm identity: 125
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 56, 0

Conread position: 60-151
Cow position:
Alignm length: 94
Alignm identity: 80
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 55, 0

Conread position: 60-174
Cow position:
Alignm length: 116
Alignm identity: 94
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 95, 0

Conread position: 60-197
Cow position:
Alignm length: 145
Alignm identity: 112
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 51, 0

Conread position: 60-197
Cow position:
Alignm length: 139
Alignm identity: 109
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 59, 95

Conread position: 60-201
Cow position:
Alignm length: 143
Alignm identity: 114
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 55, 23

Conread position: 60-202
Cow position:
Alignm length: 144
Alignm identity: 111
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 95, 63

Conread position: 60-203
Cow position:
Alignm length: 148
Alignm identity: 113
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 56, 0

Conread position: 60-203
Cow position:
Alignm length: 147
Alignm identity: 115
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 56, 38

Conread position: 60-203
Cow position:
Alignm length: 145
Alignm identity: 112
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 95, 0

Conread position: 60-203
Cow position:
Alignm length: 146
Alignm identity: 118
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 70, 56

Conread position: 61-197
Cow position:
Alignm length: 139
Alignm identity: 112
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 59, 0

Conread position: 61-198
Cow position:
Alignm length: 139
Alignm identity: 108
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 94, 24

Conread position: 62-204
Cow position:
Alignm length: 145
Alignm identity: 119
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 49, 0

Conread position: 62-204
Cow position:
Alignm length: 144
Alignm identity: 114
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 60, 54

Conread position: 62-207
Cow position:
Alignm length: 151
Alignm identity: 121
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 56, 6

Conread position: 63-193
Cow position:
Alignm length: 132
Alignm identity: 104
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 92, 53

Conread position: 64-174
Cow position:
Alignm length: 112
Alignm identity: 88
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 81, 0

Conread position: 64-193
Cow position:
Alignm length: 133
Alignm identity: 108
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 54, 0

Conread position: 64-203
Cow position:
Alignm length: 141
Alignm identity: 110
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 91, 52

Conread position: 65-197
Cow position:
Alignm length: 137
Alignm identity: 106
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 31, 0

Conread position: 65-197
Cow position:
Alignm length: 134
Alignm identity: 114
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 90, 55

Conread position: 65-203
Cow position:
Alignm length: 142
Alignm identity: 109
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 51, 114

Conread position: 65-209
Cow position:
Alignm length: 150
Alignm identity: 121
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 58, 115

Conread position: 66-204
Cow position:
Alignm length: 140
Alignm identity: 107
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 54, 85

Conread position: 67-193
Cow position:
Alignm length: 127
Alignm identity: 102
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 43, 0

Conread position: 68-194
Cow position:
Alignm length: 128
Alignm identity: 100
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 87, 48

Conread position: 72-184
Cow position:
Alignm length: 115
Alignm identity: 98
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 49, 43

Conread position: 72-188
Cow position:
Alignm length: 124
Alignm identity: 98
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 47, 0

Conread position: 72-193
Cow position:
Alignm length: 124
Alignm identity: 96
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 83, 44

Conread position: 72-197
Cow position:
Alignm length: 130
Alignm identity: 108
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 49, 0

Conread position: 75-174
Cow position:
Alignm length: 104
Alignm identity: 88
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 41, 0

Conread position: 75-203
Cow position:
Alignm length: 130
Alignm identity: 101
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 80, 0

Conread position: 78-216
Cow position:
Alignm length: 141
Alignm identity: 109
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 121, 38

Conread position: 80-203
Cow position:
Alignm length: 127
Alignm identity: 100
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 40, 0

Conread position: 83-194
Cow position:
Alignm length: 117
Alignm identity: 94
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 33, 0

Conread position: 83-203
Cow position:
Alignm length: 122
Alignm identity: 96
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 72, 39

Conread position: 85-197
Cow position:
Alignm length: 114
Alignm identity: 97
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 70, 0

Conread position: 87-203
Cow position:
Alignm length: 122
Alignm identity: 101
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 33, 0

Conread position: 87-207
Cow position:
Alignm length: 125
Alignm identity: 102
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 34, 57

Conread position: 95-203
Cow position:
Alignm length: 110
Alignm identity: 92
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 60, 20

Conread position: 100-201
Cow position:
Alignm length: 108
Alignm identity: 89
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 21, 0

Show alignments to all cow chromosomes.