Cow genome map

Conread name: Ss1.1-rcol1026b_k12.5

Conread position: 14-203
Cow position:
Alignm length: 192
Alignm identity: 143
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 10, 67

Conread position: 15-203
Cow position:
Alignm length: 194
Alignm identity: 143
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 7, 15

Conread position: 23-197
Cow position:
Alignm length: 176
Alignm identity: 129
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 128, 0

Conread position: 26-205
Cow position:
Alignm length: 184
Alignm identity: 135
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 94, 11

Conread position: 30-182
Cow position:
Alignm length: 158
Alignm identity: 118
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 11, 25

Conread position: 30-194
Cow position:
Alignm length: 171
Alignm identity: 125
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 28, 0

Conread position: 30-203
Cow position:
Alignm length: 179
Alignm identity: 136
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 26, 0

Conread position: 30-203
Cow position:
Alignm length: 177
Alignm identity: 125
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 11, 38

Conread position: 31-203
Cow position:
Alignm length: 177
Alignm identity: 133
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 87, 138

Conread position: 36-190
Cow position:
Alignm length: 156
Alignm identity: 117
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 8, 104

Conread position: 36-197
Cow position:
Alignm length: 163
Alignm identity: 122
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 119, 93

Conread position: 36-212
Cow position:
Alignm length: 182
Alignm identity: 134
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 41, 90

Conread position: 37-146
Cow position:
Alignm length: 110
Alignm identity: 89
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 77, 0

Conread position: 37-194
Cow position:
Alignm length: 159
Alignm identity: 118
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 118, 78

Conread position: 37-197
Cow position:
Alignm length: 162
Alignm identity: 126
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 118, 85

Conread position: 37-203
Cow position:
Alignm length: 169
Alignm identity: 135
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 19, 13

Conread position: 42-203
Cow position:
Alignm length: 164
Alignm identity: 117
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 81, 0

Conread position: 47-191
Cow position:
Alignm length: 146
Alignm identity: 108
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 108, 0

Conread position: 47-197
Cow position:
Alignm length: 152
Alignm identity: 117
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 108, 69

Conread position: 47-197
Cow position:
Alignm length: 156
Alignm identity: 125
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 76, 0

Conread position: 47-203
Cow position:
Alignm length: 158
Alignm identity: 124
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 108, 69

Conread position: 47-205
Cow position:
Alignm length: 160
Alignm identity: 123
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 108, 11

Conread position: 48-200
Cow position:
Alignm length: 156
Alignm identity: 122
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 21, 122

Conread position: 48-203
Cow position:
Alignm length: 157
Alignm identity: 119
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 107, 0

Conread position: 48-203
Cow position:
Alignm length: 157
Alignm identity: 119
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 107, 62

Conread position: 49-203
Cow position:
Alignm length: 158
Alignm identity: 117
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 69, 5

Conread position: 51-197
Cow position:
Alignm length: 148
Alignm identity: 115
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 104, 57

Conread position: 51-201
Cow position:
Alignm length: 151
Alignm identity: 113
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 65, 0

Conread position: 51-203
Cow position:
Alignm length: 154
Alignm identity: 114
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 106, 61

Conread position: 51-203
Cow position:
Alignm length: 160
Alignm identity: 125
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 63, 0

Conread position: 51-205
Cow position:
Alignm length: 161
Alignm identity: 130
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 61, 0

Conread position: 51-207
Cow position:
Alignm length: 161
Alignm identity: 123
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 64, 42

Conread position: 51-209
Cow position:
Alignm length: 164
Alignm identity: 123
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 62, 0

Conread position: 52-188
Cow position:
Alignm length: 139
Alignm identity: 104
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 70, 62

Conread position: 52-192
Cow position:
Alignm length: 143
Alignm identity: 108
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 64, 81

Conread position: 52-193
Cow position:
Alignm length: 144
Alignm identity: 110
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 103, 68

Conread position: 52-193
Cow position:
Alignm length: 142
Alignm identity: 109
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 22, 0

Conread position: 52-194
Cow position:
Alignm length: 144
Alignm identity: 117
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 103, 68

Conread position: 52-194
Cow position:
Alignm length: 144
Alignm identity: 109
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 103, 71

Conread position: 52-202
Cow position:
Alignm length: 152
Alignm identity: 119
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 103, 0

Conread position: 52-203
Cow position:
Alignm length: 152
Alignm identity: 111
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 102, 0

Conread position: 52-203
Cow position:
Alignm length: 154
Alignm identity: 117
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 61, 47

Conread position: 52-203
Cow position:
Alignm length: 154
Alignm identity: 124
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 63, 104

Conread position: 52-203
Cow position:
Alignm length: 153
Alignm identity: 117
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 103, 64

Conread position: 52-203
Cow position:
Alignm length: 153
Alignm identity: 125
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 103, 59

Conread position: 52-203
Cow position:
Alignm length: 155
Alignm identity: 123
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 68, 24

Conread position: 52-206
Cow position:
Alignm length: 162
Alignm identity: 125
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 21, 73

Conread position: 52-222
Cow position:
Alignm length: 175
Alignm identity: 134
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 103, 69

Conread position: 53-203
Cow position:
Alignm length: 151
Alignm identity: 114
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 63, 0

Conread position: 54-158
Cow position:
Alignm length: 107
Alignm identity: 88
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 65, 0

Conread position: 54-176
Cow position:
Alignm length: 125
Alignm identity: 97
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 64, 0

Conread position: 54-183
Cow position:
Alignm length: 133
Alignm identity: 107
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 64, 0

Conread position: 54-184
Cow position:
Alignm length: 134
Alignm identity: 104
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 65, 0

Conread position: 54-193
Cow position:
Alignm length: 143
Alignm identity: 106
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 71, 0

Conread position: 54-203
Cow position:
Alignm length: 151
Alignm identity: 118
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 101, 59

Conread position: 54-203
Cow position:
Alignm length: 152
Alignm identity: 127
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 62, 0

Conread position: 54-203
Cow position:
Alignm length: 153
Alignm identity: 123
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 62, 0

Conread position: 54-203
Cow position:
Alignm length: 152
Alignm identity: 124
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 61, 124

Conread position: 54-203
Cow position:
Alignm length: 151
Alignm identity: 115
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 101, 65

Conread position: 54-203
Cow position:
Alignm length: 151
Alignm identity: 122
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 101, 62

Conread position: 54-203
Cow position:
Alignm length: 154
Alignm identity: 117
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 64, 0

Conread position: 54-203
Cow position:
Alignm length: 151
Alignm identity: 120
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 101, 62

Conread position: 54-203
Cow position:
Alignm length: 152
Alignm identity: 119
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 36, 69

Conread position: 54-203
Cow position:
Alignm length: 154
Alignm identity: 126
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 61, 0

Conread position: 54-203
Cow position:
Alignm length: 151
Alignm identity: 116
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 101, 62

Conread position: 54-205
Cow position:
Alignm length: 156
Alignm identity: 124
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 56, 0

Conread position: 54-205
Cow position:
Alignm length: 155
Alignm identity: 122
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 61, 90

Conread position: 54-209
Cow position:
Alignm length: 158
Alignm identity: 114
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 65, 0

Conread position: 54-213
Cow position:
Alignm length: 165
Alignm identity: 127
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 58, 118

Conread position: 55-203
Cow position:
Alignm length: 151
Alignm identity: 116
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 13, 63

Conread position: 55-203
Cow position:
Alignm length: 151
Alignm identity: 121
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 61, 0

Conread position: 57-189
Cow position:
Alignm length: 135
Alignm identity: 104
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 65, 52

Conread position: 57-191
Cow position:
Alignm length: 137
Alignm identity: 106
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 62, 0

Conread position: 57-193
Cow position:
Alignm length: 144
Alignm identity: 113
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 58, 0

Conread position: 57-194
Cow position:
Alignm length: 139
Alignm identity: 108
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 98, 57

Conread position: 57-194
Cow position:
Alignm length: 142
Alignm identity: 109
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 59, 0

Conread position: 57-194
Cow position:
Alignm length: 139
Alignm identity: 107
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 98, 54

Conread position: 57-197
Cow position:
Alignm length: 145
Alignm identity: 114
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 64, 97

Conread position: 57-197
Cow position:
Alignm length: 150
Alignm identity: 121
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 7, 0

Conread position: 57-197
Cow position:
Alignm length: 142
Alignm identity: 111
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 98, 61

Conread position: 57-197
Cow position:
Alignm length: 145
Alignm identity: 108
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 58, 93

Conread position: 57-203
Cow position:
Alignm length: 149
Alignm identity: 108
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 58, 0

Conread position: 57-203
Cow position:
Alignm length: 149
Alignm identity: 116
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 98, 63

Conread position: 57-203
Cow position:
Alignm length: 147
Alignm identity: 110
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 93, 0

Conread position: 57-203
Cow position:
Alignm length: 148
Alignm identity: 114
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 96, 62

Conread position: 57-203
Cow position:
Alignm length: 148
Alignm identity: 113
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 98, 60

Conread position: 57-203
Cow position:
Alignm length: 147
Alignm identity: 109
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 97, 0

Conread position: 57-203
Cow position:
Alignm length: 149
Alignm identity: 115
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 64, 86

Conread position: 57-203
Cow position:
Alignm length: 148
Alignm identity: 114
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 98, 58

Conread position: 57-203
Cow position:
Alignm length: 147
Alignm identity: 111
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 88, 0

Conread position: 57-203
Cow position:
Alignm length: 149
Alignm identity: 116
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 29, 22

Conread position: 57-203
Cow position:
Alignm length: 158
Alignm identity: 120
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 55, 0

Conread position: 57-204
Cow position:
Alignm length: 150
Alignm identity: 118
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 85, 52

Conread position: 57-206
Cow position:
Alignm length: 154
Alignm identity: 119
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 98, 54

Conread position: 58-194
Cow position:
Alignm length: 139
Alignm identity: 111
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 61, 0

Conread position: 58-203
Cow position:
Alignm length: 147
Alignm identity: 118
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 99, 71

Conread position: 58-203
Cow position:
Alignm length: 150
Alignm identity: 116
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 58, 0

Conread position: 58-203
Cow position:
Alignm length: 154
Alignm identity: 122
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 63, 0

Conread position: 58-203
Cow position:
Alignm length: 153
Alignm identity: 114
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 49, 97

Conread position: 58-206
Cow position:
Alignm length: 153
Alignm identity: 117
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 54, 0

Conread position: 58-206
Cow position:
Alignm length: 151
Alignm identity: 119
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 91, 75

Conread position: 58-207
Cow position:
Alignm length: 152
Alignm identity: 124
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 71, 58

Conread position: 58-212
Cow position:
Alignm length: 162
Alignm identity: 125
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 53, 111

Conread position: 58-213
Cow position:
Alignm length: 163
Alignm identity: 123
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 53, 111

Conread position: 59-193
Cow position:
Alignm length: 136
Alignm identity: 113
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 96, 57

Conread position: 59-193
Cow position:
Alignm length: 136
Alignm identity: 109
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 96, 70

Conread position: 59-194
Cow position:
Alignm length: 137
Alignm identity: 104
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 87, 57

Conread position: 59-203
Cow position:
Alignm length: 150
Alignm identity: 119
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 56, 0

Conread position: 59-205
Cow position:
Alignm length: 150
Alignm identity: 118
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 96, 51

Conread position: 60-186
Cow position:
Alignm length: 131
Alignm identity: 102
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 55, 0

Conread position: 60-203
Cow position:
Alignm length: 152
Alignm identity: 120
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 55, 0

Conread position: 60-203
Cow position:
Alignm length: 146
Alignm identity: 112
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 62, 0

Conread position: 60-203
Cow position:
Alignm length: 145
Alignm identity: 116
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 95, 56

Conread position: 60-204
Cow position:
Alignm length: 149
Alignm identity: 115
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 15, 108

Conread position: 60-205
Cow position:
Alignm length: 153
Alignm identity: 116
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 61, 0

Conread position: 61-173
Cow position:
Alignm length: 114
Alignm identity: 93
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 94, 55

Conread position: 61-203
Cow position:
Alignm length: 143
Alignm identity: 107
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 55, 0

Conread position: 62-193
Cow position:
Alignm length: 139
Alignm identity: 110
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 52, 0

Conread position: 62-203
Cow position:
Alignm length: 144
Alignm identity: 112
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 53, 61

Conread position: 63-207
Cow position:
Alignm length: 146
Alignm identity: 111
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 92, 38

Conread position: 64-193
Cow position:
Alignm length: 132
Alignm identity: 109
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 42, 80

Conread position: 65-194
Cow position:
Alignm length: 132
Alignm identity: 105
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 34, 56

Conread position: 65-197
Cow position:
Alignm length: 137
Alignm identity: 106
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 78, 61

Conread position: 66-204
Cow position:
Alignm length: 139
Alignm identity: 108
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 50, 0

Conread position: 69-211
Cow position:
Alignm length: 144
Alignm identity: 107
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 118, 46

Conread position: 72-194
Cow position:
Alignm length: 124
Alignm identity: 96
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 83, 44

Conread position: 72-203
Cow position:
Alignm length: 135
Alignm identity: 107
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 17, 80

Conread position: 74-203
Cow position:
Alignm length: 134
Alignm identity: 102
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 56, 0

Conread position: 75-190
Cow position:
Alignm length: 121
Alignm identity: 97
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 40, 0

Conread position: 75-203
Cow position:
Alignm length: 130
Alignm identity: 103
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 80, 41

Conread position: 75-203
Cow position:
Alignm length: 130
Alignm identity: 102
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 80, 0

Conread position: 75-203
Cow position:
Alignm length: 129
Alignm identity: 98
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 41, 0

Conread position: 75-203
Cow position:
Alignm length: 133
Alignm identity: 101
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 47, 0

Conread position: 75-203
Cow position:
Alignm length: 130
Alignm identity: 105
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 80, 0

Conread position: 75-204
Cow position:
Alignm length: 137
Alignm identity: 105
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 39, 0

Conread position: 77-209
Cow position:
Alignm length: 135
Alignm identity: 104
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 47, 6

Conread position: 79-203
Cow position:
Alignm length: 127
Alignm identity: 105
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 34, 0

Conread position: 79-203
Cow position:
Alignm length: 128
Alignm identity: 99
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 42, 0

Conread position: 85-203
Cow position:
Alignm length: 122
Alignm identity: 105
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 34, 0

Conread position: 87-197
Cow position:
Alignm length: 112
Alignm identity: 93
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 68, 33

Conread position: 87-203
Cow position:
Alignm length: 118
Alignm identity: 97
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 70, 23

Show alignments to all cow chromosomes.