Cow genome map

Conread name: Ss1.1-rcol1026b_k12.5

Conread position: 15-171
Cow position:
Alignm length: 158
Alignm identity: 123
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 140, 15

Conread position: 23-202
Cow position:
Alignm length: 184
Alignm identity: 129
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 21, 112

Conread position: 25-172
Cow position:
Alignm length: 149
Alignm identity: 114
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 130, 5

Conread position: 25-202
Cow position:
Alignm length: 179
Alignm identity: 132
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 130, 88

Conread position: 26-197
Cow position:
Alignm length: 174
Alignm identity: 122
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 94, 0

Conread position: 30-183
Cow position:
Alignm length: 159
Alignm identity: 121
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 11, 0

Conread position: 37-192
Cow position:
Alignm length: 158
Alignm identity: 116
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 80, 67

Conread position: 37-197
Cow position:
Alignm length: 165
Alignm identity: 126
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 82, 13

Conread position: 37-203
Cow position:
Alignm length: 168
Alignm identity: 126
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 70, 79

Conread position: 37-205
Cow position:
Alignm length: 172
Alignm identity: 128
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 83, 21

Conread position: 41-203
Cow position:
Alignm length: 164
Alignm identity: 124
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 114, 75

Conread position: 43-194
Cow position:
Alignm length: 153
Alignm identity: 115
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 112, 87

Conread position: 43-200
Cow position:
Alignm length: 160
Alignm identity: 123
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 75, 0

Conread position: 43-205
Cow position:
Alignm length: 170
Alignm identity: 132
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 74, 8

Conread position: 47-193
Cow position:
Alignm length: 149
Alignm identity: 110
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 80, 69

Conread position: 47-203
Cow position:
Alignm length: 158
Alignm identity: 114
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 108, 69

Conread position: 47-203
Cow position:
Alignm length: 161
Alignm identity: 118
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 70, 0

Conread position: 51-183
Cow position:
Alignm length: 134
Alignm identity: 102
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 102, 65

Conread position: 51-203
Cow position:
Alignm length: 156
Alignm identity: 127
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 33, 16

Conread position: 51-203
Cow position:
Alignm length: 154
Alignm identity: 118
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 104, 62

Conread position: 51-205
Cow position:
Alignm length: 158
Alignm identity: 119
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 104, 22

Conread position: 51-228
Cow position:
Alignm length: 179
Alignm identity: 127
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 104, 131

Conread position: 52-168
Cow position:
Alignm length: 119
Alignm identity: 95
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 26, 70

Conread position: 52-194
Cow position:
Alignm length: 145
Alignm identity: 116
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 63, 0

Conread position: 52-194
Cow position:
Alignm length: 146
Alignm identity: 111
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 31, 79

Conread position: 52-197
Cow position:
Alignm length: 147
Alignm identity: 119
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 103, 24

Conread position: 52-202
Cow position:
Alignm length: 153
Alignm identity: 114
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 103, 38

Conread position: 52-203
Cow position:
Alignm length: 154
Alignm identity: 119
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 80, 94

Conread position: 52-203
Cow position:
Alignm length: 154
Alignm identity: 116
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 49, 23

Conread position: 52-203
Cow position:
Alignm length: 155
Alignm identity: 125
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 71, 48

Conread position: 52-205
Cow position:
Alignm length: 162
Alignm identity: 124
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 22, 0

Conread position: 53-205
Cow position:
Alignm length: 157
Alignm identity: 118
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 102, 58

Conread position: 54-177
Cow position:
Alignm length: 127
Alignm identity: 98
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 64, 0

Conread position: 54-193
Cow position:
Alignm length: 146
Alignm identity: 117
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 12, 18

Conread position: 54-197
Cow position:
Alignm length: 145
Alignm identity: 115
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 101, 20

Conread position: 54-197
Cow position:
Alignm length: 147
Alignm identity: 113
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 63, 0

Conread position: 54-197
Cow position:
Alignm length: 145
Alignm identity: 109
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 102, 54

Conread position: 54-198
Cow position:
Alignm length: 145
Alignm identity: 122
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 100, 0

Conread position: 54-202
Cow position:
Alignm length: 152
Alignm identity: 111
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 61, 0

Conread position: 54-202
Cow position:
Alignm length: 152
Alignm identity: 114
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 60, 0

Conread position: 54-202
Cow position:
Alignm length: 152
Alignm identity: 115
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 39, 53

Conread position: 54-202
Cow position:
Alignm length: 150
Alignm identity: 114
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 95, 62

Conread position: 54-203
Cow position:
Alignm length: 155
Alignm identity: 122
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 22, 0

Conread position: 54-203
Cow position:
Alignm length: 150
Alignm identity: 122
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 66, 0

Conread position: 54-203
Cow position:
Alignm length: 156
Alignm identity: 120
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 65, 0

Conread position: 54-203
Cow position:
Alignm length: 151
Alignm identity: 114
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 101, 60

Conread position: 54-203
Cow position:
Alignm length: 153
Alignm identity: 117
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 62, 0

Conread position: 54-203
Cow position:
Alignm length: 151
Alignm identity: 120
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 101, 68

Conread position: 54-206
Cow position:
Alignm length: 157
Alignm identity: 118
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 64, 14

Conread position: 55-172
Cow position:
Alignm length: 120
Alignm identity: 97
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 60, 0

Conread position: 55-203
Cow position:
Alignm length: 152
Alignm identity: 121
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 59, 0

Conread position: 57-162
Cow position:
Alignm length: 111
Alignm identity: 91
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 58, 0

Conread position: 57-166
Cow position:
Alignm length: 111
Alignm identity: 94
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 97, 17

Conread position: 57-179
Cow position:
Alignm length: 126
Alignm identity: 103
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 39, 57

Conread position: 57-185
Cow position:
Alignm length: 133
Alignm identity: 110
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 58, 0

Conread position: 57-193
Cow position:
Alignm length: 140
Alignm identity: 111
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 97, 36

Conread position: 57-195
Cow position:
Alignm length: 140
Alignm identity: 110
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 18, 54

Conread position: 57-197
Cow position:
Alignm length: 141
Alignm identity: 107
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 64, 0

Conread position: 57-197
Cow position:
Alignm length: 144
Alignm identity: 115
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 58, 100

Conread position: 57-197
Cow position:
Alignm length: 144
Alignm identity: 114
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 58, 44

Conread position: 57-197
Cow position:
Alignm length: 145
Alignm identity: 111
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 64, 54

Conread position: 57-197
Cow position:
Alignm length: 145
Alignm identity: 119
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 63, 0

Conread position: 57-197
Cow position:
Alignm length: 145
Alignm identity: 116
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 56, 0

Conread position: 57-198
Cow position:
Alignm length: 150
Alignm identity: 114
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 58, 9

Conread position: 57-198
Cow position:
Alignm length: 146
Alignm identity: 112
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 60, 0

Conread position: 57-203
Cow position:
Alignm length: 150
Alignm identity: 123
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 62, 47

Conread position: 57-203
Cow position:
Alignm length: 148
Alignm identity: 111
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 98, 73

Conread position: 57-203
Cow position:
Alignm length: 152
Alignm identity: 120
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 32, 64

Conread position: 57-203
Cow position:
Alignm length: 153
Alignm identity: 124
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 41, 68

Conread position: 57-203
Cow position:
Alignm length: 152
Alignm identity: 119
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 26, 44

Conread position: 57-203
Cow position:
Alignm length: 149
Alignm identity: 114
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 64, 41

Conread position: 57-203
Cow position:
Alignm length: 151
Alignm identity: 115
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 62, 122

Conread position: 57-203
Cow position:
Alignm length: 156
Alignm identity: 122
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 78, 0

Conread position: 57-203
Cow position:
Alignm length: 149
Alignm identity: 122
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 13, 64

Conread position: 57-203
Cow position:
Alignm length: 147
Alignm identity: 111
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 13, 0

Conread position: 57-203
Cow position:
Alignm length: 150
Alignm identity: 115
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 58, 0

Conread position: 57-203
Cow position:
Alignm length: 150
Alignm identity: 119
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 16, 81

Conread position: 57-204
Cow position:
Alignm length: 159
Alignm identity: 120
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 59, 0

Conread position: 57-204
Cow position:
Alignm length: 153
Alignm identity: 118
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 58, 0

Conread position: 57-206
Cow position:
Alignm length: 153
Alignm identity: 124
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 96, 108

Conread position: 58-197
Cow position:
Alignm length: 140
Alignm identity: 109
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 58, 0

Conread position: 58-197
Cow position:
Alignm length: 141
Alignm identity: 119
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 97, 58

Conread position: 58-201
Cow position:
Alignm length: 148
Alignm identity: 117
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 65, 40

Conread position: 58-203
Cow position:
Alignm length: 149
Alignm identity: 109
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 97, 58

Conread position: 59-193
Cow position:
Alignm length: 137
Alignm identity: 111
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 59, 11

Conread position: 60-194
Cow position:
Alignm length: 136
Alignm identity: 107
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 95, 56

Conread position: 60-197
Cow position:
Alignm length: 139
Alignm identity: 107
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 63, 0

Conread position: 60-203
Cow position:
Alignm length: 146
Alignm identity: 112
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 18, 51

Conread position: 60-203
Cow position:
Alignm length: 150
Alignm identity: 111
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 48, 0

Conread position: 61-197
Cow position:
Alignm length: 140
Alignm identity: 111
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 61, 112

Conread position: 61-203
Cow position:
Alignm length: 147
Alignm identity: 118
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 58, 0

Conread position: 62-190
Cow position:
Alignm length: 130
Alignm identity: 103
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 93, 19

Conread position: 63-204
Cow position:
Alignm length: 143
Alignm identity: 117
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 92, 0

Conread position: 64-201
Cow position:
Alignm length: 143
Alignm identity: 109
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 48, 0

Conread position: 64-203
Cow position:
Alignm length: 141
Alignm identity: 114
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 91, 53

Conread position: 64-203
Cow position:
Alignm length: 141
Alignm identity: 114
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 91, 53

Conread position: 64-209
Cow position:
Alignm length: 151
Alignm identity: 117
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 55, 0

Conread position: 65-203
Cow position:
Alignm length: 141
Alignm identity: 113
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 28, 35

Conread position: 66-203
Cow position:
Alignm length: 139
Alignm identity: 116
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 89, 66

Conread position: 67-211
Cow position:
Alignm length: 151
Alignm identity: 116
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 65, 0

Conread position: 69-203
Cow position:
Alignm length: 136
Alignm identity: 104
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 86, 45

Conread position: 69-204
Cow position:
Alignm length: 142
Alignm identity: 109
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 44, 0

Conread position: 69-209
Cow position:
Alignm length: 142
Alignm identity: 112
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 130, 47

Conread position: 72-192
Cow position:
Alignm length: 124
Alignm identity: 99
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 47, 108

Conread position: 72-193
Cow position:
Alignm length: 123
Alignm identity: 99
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 83, 42

Conread position: 72-197
Cow position:
Alignm length: 129
Alignm identity: 109
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 44, 0

Conread position: 72-197
Cow position:
Alignm length: 127
Alignm identity: 100
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 83, 96

Conread position: 72-197
Cow position:
Alignm length: 127
Alignm identity: 96
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 83, 0

Conread position: 72-203
Cow position:
Alignm length: 134
Alignm identity: 105
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 47, 0

Conread position: 72-203
Cow position:
Alignm length: 136
Alignm identity: 105
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 46, 0

Conread position: 72-203
Cow position:
Alignm length: 133
Alignm identity: 107
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 83, 42

Conread position: 72-203
Cow position:
Alignm length: 132
Alignm identity: 105
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 48, 0

Conread position: 74-168
Cow position:
Alignm length: 97
Alignm identity: 84
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 47, 0

Conread position: 74-203
Cow position:
Alignm length: 131
Alignm identity: 102
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 81, 19

Conread position: 75-192
Cow position:
Alignm length: 119
Alignm identity: 93
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 80, 41

Conread position: 75-203
Cow position:
Alignm length: 132
Alignm identity: 101
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 42, 0

Conread position: 75-203
Cow position:
Alignm length: 130
Alignm identity: 108
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 80, 41

Conread position: 79-206
Cow position:
Alignm length: 130
Alignm identity: 99
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 40, 0

Conread position: 83-192
Cow position:
Alignm length: 116
Alignm identity: 100
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 29, 0

Conread position: 83-197
Cow position:
Alignm length: 116
Alignm identity: 91
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 72, 88

Conread position: 88-203
Cow position:
Alignm length: 118
Alignm identity: 96
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 54, 0

Show alignments to all cow chromosomes.