Cow genome map

Conread name: Ss1.1-rcol1026b_k12.5

Conread position: 14-191
Cow position: chr26:12155031-12155204 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 136
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 123, 16

Conread position: 15-201
Cow position: chr26:5246387-5246576 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 142
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 36, 15

Conread position: 23-203
Cow position: chr26:34314773-34314591 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 128
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 95, 0

Conread position: 30-203
Cow position: chr26:33011593-33011766 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 125
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 124, 90

Conread position: 37-194
Cow position: chr26:23671484-23671324 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 121
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 85, 0

Conread position: 37-209
Cow position: chr26:4167285-4167463 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 136
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 84, 78

Conread position: 38-193
Cow position: chr26:32836306-32836152 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 117
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 117, 75

Conread position: 43-203
Cow position: chr26:23097122-23097276 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 128
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 73, 42

Conread position: 47-203
Cow position: chr26:10767855-10768010 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 127
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 108, 7

Conread position: 47-203
Cow position: chr26:16179620-16179465 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 115
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 108, 76

Conread position: 47-204
Cow position: chr26:10764271-10764121 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 123
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 5, 76

Conread position: 50-183
Cow position: chr26:34106452-34106320 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 107
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 105, 69

Conread position: 50-197
Cow position: chr26:2531127-2531273 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 111
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 105, 71

Conread position: 51-197
Cow position: chr26:11263697-11263549 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 114
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 12, 73

Conread position: 51-203
Cow position: chr26:32776452-32776606 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 122
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 67, 0

Conread position: 51-205
Cow position: chr26:33074443-33074600 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 120
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 65, 47

Conread position: 52-192
Cow position: chr26:3071922-3072053 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 111
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 103, 29

Conread position: 52-192
Cow position: chr26:6252910-6252764 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 113
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 17, 0

Conread position: 52-194
Cow position: chr26:586826-586965 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 112
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 56, 0

Conread position: 52-194
Cow position: chr26:25299652-25299511 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 108
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 103, 69

Conread position: 52-198
Cow position: chr26:5360926-5361063 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 115
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 63, 0

Conread position: 52-198
Cow position: chr26:11538585-11538439 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 111
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 80, 69

Conread position: 52-203
Cow position: chr26:7315056-7315201 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 119
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 103, 19

Conread position: 52-203
Cow position: chr26:16550037-16549886 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 119
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 103, 61

Conread position: 52-203
Cow position: chr26:25526302-25526148 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 118
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 73, 0

Conread position: 52-203
Cow position: chr26:33857141-33857291 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 112
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 102, 0

Conread position: 52-209
Cow position: chr26:4854598-4854434 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 125
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 63, 0

Conread position: 53-197
Cow position: chr26:32834527-32834666 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 118
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 102, 34

Conread position: 53-203
Cow position: chr26:33253264-33253418 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 123
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 59, 0

Conread position: 54-183
Cow position: chr26:18876911-18877036 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 103
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 101, 63

Conread position: 54-194
Cow position: chr26:32013684-32013538 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 111
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 61, 0

Conread position: 54-197
Cow position: chr26:31903218-31903073 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 107
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 63, 0

Conread position: 54-200
Cow position: chr26:6794196-6794055 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 121
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 61, 0

Conread position: 54-202
Cow position: chr26:29333144-29332995 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 113
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 50, 103

Conread position: 54-203
Cow position: chr26:21992153-21992004 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 121
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 101, 62

Conread position: 54-207
Cow position: chr26:34060384-34060229 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 121
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 101, 71

Conread position: 54-208
Cow position: chr26:19459744-19459580 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 131
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 61, 131

Conread position: 54-209
Cow position: chr26:31633779-31633622 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 124
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 103, 66

Conread position: 55-194
Cow position: chr26:25394084-25393941 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 112
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 9, 0

Conread position: 55-203
Cow position: chr26:32672387-32672536 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 117
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 100, 56

Conread position: 57-160
Cow position: chr26:22602990-22603095 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 87
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 57, 0

Conread position: 57-184
Cow position: chr26:8699999-8700127 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 105
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 98, 0

Conread position: 57-188
Cow position: chr26:3706840-3706711 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 106
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 101, 60

Conread position: 57-192
Cow position: chr26:32815742-32815880 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 105
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 62, 0

Conread position: 57-194
Cow position: chr26:4585162-4585296 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 105
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 66, 57

Conread position: 57-194
Cow position: chr26:6865072-6864926 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 118
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 58, 0

Conread position: 57-198
Cow position: chr26:17057726-17057589 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 110
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 98, 56

Conread position: 57-201
Cow position: chr26:10965546-10965686 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 114
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 64, 0

Conread position: 57-203
Cow position: chr26:6475379-6475529 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 118
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 64, 0

Conread position: 57-203
Cow position: chr26:6486603-6486753 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 115
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 65, 0

Conread position: 57-203
Cow position: chr26:8353017-8352862 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 123
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 57, 0

Conread position: 57-203
Cow position: chr26:8811175-8811031 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 111
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 99, 60

Conread position: 57-203
Cow position: chr26:9104233-9104378 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 113
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 98, 86

Conread position: 57-203
Cow position: chr26:9604610-9604460 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 117
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 98, 64

Conread position: 57-203
Cow position: chr26:13818470-13818325 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 112
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 98, 57

Conread position: 57-203
Cow position: chr26:14905760-14905910 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 112
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 54, 67

Conread position: 57-203
Cow position: chr26:22152275-22152128 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 119
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 62, 86

Conread position: 57-203
Cow position: chr26:22249429-22249577 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 122
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 36, 43

Conread position: 57-203
Cow position: chr26:22354461-22354315 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 116
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 98, 68

Conread position: 57-203
Cow position: chr26:32670447-32670591 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 111
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 62, 86

Conread position: 57-204
Cow position: chr26:12893379-12893523 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 122
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 98, 62

Conread position: 58-203
Cow position: chr26:15200466-15200612 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 124
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 34, 98

Conread position: 58-203
Cow position: chr26:16796182-16796329 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 112
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 62, 95

Conread position: 58-203
Cow position: chr26:35449110-35448961 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 112
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 62, 0

Conread position: 59-193
Cow position: chr26:20013524-20013389 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 109
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 96, 0

Conread position: 59-203
Cow position: chr26:14578373-14578229 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 111
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 96, 123

Conread position: 59-203
Cow position: chr26:33566998-33567144 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 118
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 60, 24

Conread position: 60-193
Cow position: chr26:26790-26928 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 111
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 62, 0

Conread position: 60-193
Cow position: chr26:19774254-19774390 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 107
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 54, 0

Conread position: 60-194
Cow position: chr26:5750114-5750249 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 106
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 59, 43

Conread position: 60-194
Cow position: chr26:6724150-6724022 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 116
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 95, 51

Conread position: 60-194
Cow position: chr26:32842760-32842891 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 104
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 95, 60

Conread position: 60-202
Cow position: chr26:8642993-8642847 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 117
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 56, 0

Conread position: 60-202
Cow position: chr26:34108804-34108665 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 110
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 22, 61

Conread position: 60-203
Cow position: chr26:4807603-4807463 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 118
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 89, 52

Conread position: 60-203
Cow position: chr26:16921983-16921841 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 113
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 95, 50

Conread position: 61-203
Cow position: chr26:21243146-21243003 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 113
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 94, 0

Conread position: 62-198
Cow position: chr26:31779525-31779389 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 113
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 87, 115

Conread position: 63-203
Cow position: chr26:18692463-18692325 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 109
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 34, 41

Conread position: 65-197
Cow position: chr26:613635-613771 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 106
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 54, 0

Conread position: 69-203
Cow position: chr26:25737507-25737375 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 106
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 86, 34

Conread position: 72-198
Cow position: chr26:14957986-14958107 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 103
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 83, 42

Conread position: 72-203
Cow position: chr26:6447564-6447700 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 106
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 43, 0

Conread position: 75-197
Cow position: chr26:21351723-21351596 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 103
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 16, 0

Conread position: 75-202
Cow position: chr26:9850067-9850197 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 101
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 40, 0

Conread position: 75-202
Cow position: chr26:9853577-9853707 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 101
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 40, 0

Conread position: 75-202
Cow position: chr26:20448992-20448868 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 99
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 47, 0

Conread position: 80-203
Cow position: chr26:23925960-23926085 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 105
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 41, 0

Conread position: 84-197
Cow position: chr26:7153367-7153248 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 96
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 36, 0

Conread position: 88-197
Cow position: chr26:32832208-32832094 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 96
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 32, 0

Show alignments to all cow chromosomes.