Cow genome map

Conread name: Ss1.1-rcol1026b_k12.5

Conread position: 2-194
Cow position:
Alignm length: 199
Alignm identity: 143
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 8, 24

Conread position: 9-183
Cow position:
Alignm length: 185
Alignm identity: 136
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 69, 32

Conread position: 13-185
Cow position:
Alignm length: 178
Alignm identity: 127
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 104, 30

Conread position: 15-193
Cow position:
Alignm length: 182
Alignm identity: 133
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 9, 150

Conread position: 15-197
Cow position:
Alignm length: 185
Alignm identity: 139
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 102, 15

Conread position: 15-197
Cow position:
Alignm length: 187
Alignm identity: 138
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 24, 15

Conread position: 15-209
Cow position:
Alignm length: 199
Alignm identity: 138
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 7, 107

Conread position: 23-180
Cow position:
Alignm length: 163
Alignm identity: 117
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 100, 0

Conread position: 30-203
Cow position:
Alignm length: 176
Alignm identity: 131
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 89, 11

Conread position: 30-203
Cow position:
Alignm length: 177
Alignm identity: 128
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 11, 85

Conread position: 30-203
Cow position:
Alignm length: 181
Alignm identity: 129
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 23, 0

Conread position: 36-193
Cow position:
Alignm length: 162
Alignm identity: 118
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 74, 96

Conread position: 36-203
Cow position:
Alignm length: 170
Alignm identity: 124
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 62, 87

Conread position: 37-194
Cow position:
Alignm length: 167
Alignm identity: 126
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 107, 72

Conread position: 37-194
Cow position:
Alignm length: 159
Alignm identity: 115
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 119, 38

Conread position: 37-197
Cow position:
Alignm length: 163
Alignm identity: 125
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 120, 83

Conread position: 37-202
Cow position:
Alignm length: 167
Alignm identity: 124
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 120, 113

Conread position: 38-194
Cow position:
Alignm length: 158
Alignm identity: 116
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 117, 78

Conread position: 40-203
Cow position:
Alignm length: 167
Alignm identity: 131
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 72, 18

Conread position: 42-202
Cow position:
Alignm length: 162
Alignm identity: 124
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 113, 0

Conread position: 43-173
Cow position:
Alignm length: 134
Alignm identity: 103
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 72, 89

Conread position: 43-203
Cow position:
Alignm length: 165
Alignm identity: 125
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 38, 33

Conread position: 47-197
Cow position:
Alignm length: 152
Alignm identity: 118
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 108, 66

Conread position: 47-203
Cow position:
Alignm length: 159
Alignm identity: 113
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 67, 0

Conread position: 47-203
Cow position:
Alignm length: 158
Alignm identity: 121
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 96, 0

Conread position: 47-203
Cow position:
Alignm length: 158
Alignm identity: 120
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 108, 69

Conread position: 50-203
Cow position:
Alignm length: 156
Alignm identity: 113
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 65, 0

Conread position: 51-192
Cow position:
Alignm length: 145
Alignm identity: 112
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 67, 0

Conread position: 51-197
Cow position:
Alignm length: 148
Alignm identity: 118
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 104, 115

Conread position: 51-197
Cow position:
Alignm length: 151
Alignm identity: 115
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 7, 103

Conread position: 51-197
Cow position:
Alignm length: 148
Alignm identity: 109
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 131, 68

Conread position: 51-203
Cow position:
Alignm length: 162
Alignm identity: 119
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 68, 0

Conread position: 51-203
Cow position:
Alignm length: 155
Alignm identity: 114
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 69, 0

Conread position: 52-153
Cow position:
Alignm length: 102
Alignm identity: 85
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 69, 0

Conread position: 52-185
Cow position:
Alignm length: 136
Alignm identity: 108
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 34, 0

Conread position: 52-193
Cow position:
Alignm length: 148
Alignm identity: 120
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 59, 0

Conread position: 52-203
Cow position:
Alignm length: 155
Alignm identity: 117
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 103, 9

Conread position: 52-203
Cow position:
Alignm length: 152
Alignm identity: 115
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 64, 0

Conread position: 52-203
Cow position:
Alignm length: 153
Alignm identity: 120
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 103, 60

Conread position: 52-204
Cow position:
Alignm length: 156
Alignm identity: 112
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 72, 0

Conread position: 52-208
Cow position:
Alignm length: 164
Alignm identity: 120
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 58, 92

Conread position: 52-218
Cow position:
Alignm length: 168
Alignm identity: 129
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 103, 0

Conread position: 53-205
Cow position:
Alignm length: 154
Alignm identity: 126
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 104, 27

Conread position: 54-194
Cow position:
Alignm length: 142
Alignm identity: 106
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 101, 61

Conread position: 54-194
Cow position:
Alignm length: 147
Alignm identity: 121
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 56, 0

Conread position: 54-197
Cow position:
Alignm length: 149
Alignm identity: 114
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 60, 0

Conread position: 54-202
Cow position:
Alignm length: 152
Alignm identity: 113
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 64, 0

Conread position: 54-202
Cow position:
Alignm length: 150
Alignm identity: 118
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 99, 57

Conread position: 54-202
Cow position:
Alignm length: 152
Alignm identity: 113
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 71, 54

Conread position: 54-203
Cow position:
Alignm length: 155
Alignm identity: 114
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 61, 0

Conread position: 54-203
Cow position:
Alignm length: 152
Alignm identity: 112
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 66, 80

Conread position: 54-205
Cow position:
Alignm length: 156
Alignm identity: 119
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 101, 0

Conread position: 54-205
Cow position:
Alignm length: 157
Alignm identity: 122
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 35, 99

Conread position: 54-206
Cow position:
Alignm length: 156
Alignm identity: 119
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 62, 22

Conread position: 54-208
Cow position:
Alignm length: 161
Alignm identity: 123
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 59, 147

Conread position: 55-194
Cow position:
Alignm length: 147
Alignm identity: 112
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 9, 15

Conread position: 55-203
Cow position:
Alignm length: 154
Alignm identity: 114
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 60, 0

Conread position: 57-167
Cow position:
Alignm length: 112
Alignm identity: 88
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 98, 0

Conread position: 57-192
Cow position:
Alignm length: 137
Alignm identity: 110
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 98, 63

Conread position: 57-193
Cow position:
Alignm length: 140
Alignm identity: 107
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 64, 112

Conread position: 57-193
Cow position:
Alignm length: 138
Alignm identity: 110
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 97, 59

Conread position: 57-193
Cow position:
Alignm length: 137
Alignm identity: 109
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 5, 0

Conread position: 57-197
Cow position:
Alignm length: 145
Alignm identity: 117
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 59, 32

Conread position: 57-197
Cow position:
Alignm length: 142
Alignm identity: 107
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 55, 98

Conread position: 57-197
Cow position:
Alignm length: 143
Alignm identity: 108
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 62, 33

Conread position: 57-197
Cow position:
Alignm length: 142
Alignm identity: 108
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 58, 92

Conread position: 57-197
Cow position:
Alignm length: 148
Alignm identity: 115
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 21, 0

Conread position: 57-197
Cow position:
Alignm length: 152
Alignm identity: 121
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 58, 0

Conread position: 57-198
Cow position:
Alignm length: 144
Alignm identity: 110
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 60, 0

Conread position: 57-203
Cow position:
Alignm length: 148
Alignm identity: 113
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 98, 0

Conread position: 57-203
Cow position:
Alignm length: 148
Alignm identity: 113
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 98, 66

Conread position: 57-203
Cow position:
Alignm length: 150
Alignm identity: 119
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 58, 114

Conread position: 57-203
Cow position:
Alignm length: 148
Alignm identity: 117
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 100, 62

Conread position: 57-203
Cow position:
Alignm length: 152
Alignm identity: 117
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 19, 0

Conread position: 57-203
Cow position:
Alignm length: 148
Alignm identity: 113
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 59, 96

Conread position: 57-205
Cow position:
Alignm length: 159
Alignm identity: 120
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 9, 0

Conread position: 57-206
Cow position:
Alignm length: 153
Alignm identity: 123
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 98, 58

Conread position: 57-207
Cow position:
Alignm length: 160
Alignm identity: 125
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 24, 52

Conread position: 58-198
Cow position:
Alignm length: 145
Alignm identity: 109
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 58, 85

Conread position: 58-201
Cow position:
Alignm length: 146
Alignm identity: 113
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 57, 111

Conread position: 58-203
Cow position:
Alignm length: 151
Alignm identity: 120
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 59, 0

Conread position: 58-203
Cow position:
Alignm length: 151
Alignm identity: 120
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 64, 29

Conread position: 58-203
Cow position:
Alignm length: 147
Alignm identity: 111
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 97, 18

Conread position: 58-203
Cow position:
Alignm length: 149
Alignm identity: 112
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 62, 0

Conread position: 58-203
Cow position:
Alignm length: 147
Alignm identity: 111
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 97, 56

Conread position: 58-207
Cow position:
Alignm length: 153
Alignm identity: 116
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 62, 30

Conread position: 58-222
Cow position:
Alignm length: 169
Alignm identity: 124
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 97, 18

Conread position: 59-173
Cow position:
Alignm length: 116
Alignm identity: 94
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 96, 61

Conread position: 59-193
Cow position:
Alignm length: 135
Alignm identity: 104
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 54, 0

Conread position: 59-197
Cow position:
Alignm length: 140
Alignm identity: 113
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 90, 34

Conread position: 59-203
Cow position:
Alignm length: 149
Alignm identity: 116
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 57, 0

Conread position: 59-203
Cow position:
Alignm length: 150
Alignm identity: 118
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 57, 0

Conread position: 59-203
Cow position:
Alignm length: 147
Alignm identity: 111
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 61, 79

Conread position: 59-204
Cow position:
Alignm length: 147
Alignm identity: 114
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 96, 0

Conread position: 60-197
Cow position:
Alignm length: 140
Alignm identity: 114
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 5, 16

Conread position: 60-201
Cow position:
Alignm length: 142
Alignm identity: 114
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 25, 0

Conread position: 60-203
Cow position:
Alignm length: 148
Alignm identity: 115
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 61, 0

Conread position: 60-203
Cow position:
Alignm length: 146
Alignm identity: 108
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 79, 63

Conread position: 60-203
Cow position:
Alignm length: 147
Alignm identity: 109
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 50, 93

Conread position: 60-204
Cow position:
Alignm length: 153
Alignm identity: 121
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 50, 0

Conread position: 60-205
Cow position:
Alignm length: 147
Alignm identity: 113
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 95, 54

Conread position: 60-207
Cow position:
Alignm length: 154
Alignm identity: 116
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 58, 0

Conread position: 61-185
Cow position:
Alignm length: 126
Alignm identity: 99
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 94, 53

Conread position: 61-197
Cow position:
Alignm length: 147
Alignm identity: 117
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 51, 115

Conread position: 61-203
Cow position:
Alignm length: 146
Alignm identity: 118
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 58, 22

Conread position: 61-203
Cow position:
Alignm length: 144
Alignm identity: 113
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 94, 61

Conread position: 61-208
Cow position:
Alignm length: 150
Alignm identity: 114
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 58, 126

Conread position: 62-194
Cow position:
Alignm length: 137
Alignm identity: 107
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 61, 0

Conread position: 62-197
Cow position:
Alignm length: 137
Alignm identity: 107
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 93, 53

Conread position: 62-203
Cow position:
Alignm length: 145
Alignm identity: 111
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 63, 0

Conread position: 62-203
Cow position:
Alignm length: 142
Alignm identity: 114
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 49, 0

Conread position: 62-203
Cow position:
Alignm length: 145
Alignm identity: 111
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 53, 62

Conread position: 62-205
Cow position:
Alignm length: 145
Alignm identity: 107
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 93, 70

Conread position: 63-189
Cow position:
Alignm length: 134
Alignm identity: 106
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 52, 0

Conread position: 63-203
Cow position:
Alignm length: 142
Alignm identity: 110
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 92, 85

Conread position: 64-203
Cow position:
Alignm length: 143
Alignm identity: 107
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 55, 0

Conread position: 65-194
Cow position:
Alignm length: 131
Alignm identity: 101
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 90, 54

Conread position: 65-218
Cow position:
Alignm length: 157
Alignm identity: 121
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 90, 22

Conread position: 66-203
Cow position:
Alignm length: 141
Alignm identity: 117
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 49, 57

Conread position: 66-208
Cow position:
Alignm length: 147
Alignm identity: 122
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 9, 50

Conread position: 68-194
Cow position:
Alignm length: 130
Alignm identity: 99
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 51, 0

Conread position: 68-203
Cow position:
Alignm length: 139
Alignm identity: 106
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 54, 76

Conread position: 69-185
Cow position:
Alignm length: 118
Alignm identity: 97
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 86, 41

Conread position: 72-185
Cow position:
Alignm length: 117
Alignm identity: 93
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 43, 52

Conread position: 72-193
Cow position:
Alignm length: 123
Alignm identity: 96
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 83, 45

Conread position: 72-202
Cow position:
Alignm length: 139
Alignm identity: 109
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 82, 44

Conread position: 72-203
Cow position:
Alignm length: 134
Alignm identity: 104
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 50, 0

Conread position: 72-203
Cow position:
Alignm length: 135
Alignm identity: 107
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 41, 95

Conread position: 72-203
Cow position:
Alignm length: 133
Alignm identity: 104
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 83, 0

Conread position: 72-206
Cow position:
Alignm length: 136
Alignm identity: 103
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 85, 40

Conread position: 74-207
Cow position:
Alignm length: 137
Alignm identity: 111
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 43, 56

Conread position: 75-202
Cow position:
Alignm length: 129
Alignm identity: 102
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 80, 36

Conread position: 75-203
Cow position:
Alignm length: 137
Alignm identity: 110
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 37, 110

Conread position: 75-203
Cow position:
Alignm length: 130
Alignm identity: 106
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 80, 41

Conread position: 76-203
Cow position:
Alignm length: 132
Alignm identity: 102
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 40, 0

Conread position: 79-197
Cow position:
Alignm length: 123
Alignm identity: 97
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 45, 0

Conread position: 79-206
Cow position:
Alignm length: 130
Alignm identity: 99
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 120, 73

Conread position: 80-203
Cow position:
Alignm length: 127
Alignm identity: 104
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 38, 61

Conread position: 81-206
Cow position:
Alignm length: 129
Alignm identity: 102
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 41, 0

Conread position: 82-197
Cow position:
Alignm length: 120
Alignm identity: 96
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 34, 0

Conread position: 82-204
Cow position:
Alignm length: 124
Alignm identity: 101
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 73, 18

Conread position: 87-204
Cow position:
Alignm length: 120
Alignm identity: 93
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 32, 0

Conread position: 92-203
Cow position:
Alignm length: 113
Alignm identity: 91
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 63, 24

Show alignments to all cow chromosomes.