Cow genome map


           Conread name:
           Ss1.1-rcov26b_h24.5
        

               Conread position:
               1-101
               

               Cow position:
               chr19:15402628-15402528 (view UCSC Genome Browser custom track)
               

               Alignm length:
               101
               

               Alignm identity:
               89
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               99-330
               

               Cow position:
               chr19:15402351-15402120 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               206
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               327-482
               

               Cow position:
               chr19:15402042-15401887 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               142
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               474-596
               

               Cow position:
               chr19:15401769-15401646 (view UCSC Genome Browser custom track)
               

               Alignm length:
               124
               

               Alignm identity:
               116
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               594-772
               

               Cow position:
               chr19:15401163-15400985 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               168
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               773-848
               

               Cow position:
               chr19:15400879-15400804 (view UCSC Genome Browser custom track)
               

               Alignm length:
               76
               

               Alignm identity:
               70
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               842-999
               

               Cow position:
               chr19:15400626-15400469 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               149
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               998-1080
               

               Cow position:
               chr19:15400302-15400220 (view UCSC Genome Browser custom track)
               

               Alignm length:
               83
               

               Alignm identity:
               80
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               0, 0
               
Show alignments to all cow chromosomes.