Cow genome map

Conread name: Ss1.1-rcov33b_m10.5

Conread position: 252-414
Cow position:
Alignm length: 165
Alignm identity: 120
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 49, 82

Conread position: 252-462
Cow position:
Alignm length: 214
Alignm identity: 150
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 49, 120

Conread position: 254-397
Cow position:
Alignm length: 146
Alignm identity: 108
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 47, 0

Conread position: 255-409
Cow position:
Alignm length: 161
Alignm identity: 121
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 17, 103

Conread position: 256-397
Cow position:
Alignm length: 148
Alignm identity: 118
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 45, 0

Conread position: 256-412
Cow position:
Alignm length: 166
Alignm identity: 124
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 39, 0

Conread position: 260-397
Cow position:
Alignm length: 140
Alignm identity: 109
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 41, 90

Conread position: 261-405
Cow position:
Alignm length: 147
Alignm identity: 110
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 43, 0

Conread position: 264-476
Cow position:
Alignm length: 220
Alignm identity: 165
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 37, 0

Conread position: 265-421
Cow position:
Alignm length: 162
Alignm identity: 118
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 35, 133

Conread position: 266-383
Cow position:
Alignm length: 119
Alignm identity: 96
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 35, 54

Conread position: 267-366
Cow position:
Alignm length: 105
Alignm identity: 90
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 34, 0

Conread position: 267-380
Cow position:
Alignm length: 115
Alignm identity: 92
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 34, 72

Conread position: 267-386
Cow position:
Alignm length: 121
Alignm identity: 95
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 34, 0

Conread position: 267-387
Cow position:
Alignm length: 122
Alignm identity: 98
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 40, 93

Conread position: 267-387
Cow position:
Alignm length: 124
Alignm identity: 98
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 34, 0

Conread position: 267-394
Cow position:
Alignm length: 129
Alignm identity: 101
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 34, 110

Conread position: 267-395
Cow position:
Alignm length: 130
Alignm identity: 103
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 35, 0

Conread position: 267-396
Cow position:
Alignm length: 131
Alignm identity: 101
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 34, 0

Conread position: 267-396
Cow position:
Alignm length: 132
Alignm identity: 104
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 34, 65

Conread position: 267-396
Cow position:
Alignm length: 131
Alignm identity: 107
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 34, 62

Conread position: 267-397
Cow position:
Alignm length: 131
Alignm identity: 104
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 64, 0

Conread position: 267-397
Cow position:
Alignm length: 132
Alignm identity: 103
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 41, 57

Conread position: 267-397
Cow position:
Alignm length: 132
Alignm identity: 106
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 35, 57

Conread position: 267-397
Cow position:
Alignm length: 131
Alignm identity: 104
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 267-397
Cow position:
Alignm length: 132
Alignm identity: 108
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 34, 58

Conread position: 267-397
Cow position:
Alignm length: 134
Alignm identity: 102
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 34, 83

Conread position: 267-397
Cow position:
Alignm length: 132
Alignm identity: 102
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 34, 57

Conread position: 267-397
Cow position:
Alignm length: 133
Alignm identity: 100
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 35, 0

Conread position: 267-397
Cow position:
Alignm length: 135
Alignm identity: 106
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 36, 108

Conread position: 267-397
Cow position:
Alignm length: 132
Alignm identity: 103
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 34, 59

Conread position: 267-397
Cow position:
Alignm length: 131
Alignm identity: 105
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 57, 0

Conread position: 267-397
Cow position:
Alignm length: 132
Alignm identity: 104
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 34, 65

Conread position: 267-397
Cow position:
Alignm length: 136
Alignm identity: 108
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 35, 0

Conread position: 267-397
Cow position:
Alignm length: 133
Alignm identity: 109
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 35, 67

Conread position: 267-397
Cow position:
Alignm length: 133
Alignm identity: 103
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 34, 18

Conread position: 267-397
Cow position:
Alignm length: 136
Alignm identity: 106
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 34, 13

Conread position: 267-397
Cow position:
Alignm length: 131
Alignm identity: 104
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 56, 0

Conread position: 267-405
Cow position:
Alignm length: 148
Alignm identity: 117
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 36, 139

Conread position: 267-406
Cow position:
Alignm length: 142
Alignm identity: 109
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 36, 120

Conread position: 267-406
Cow position:
Alignm length: 145
Alignm identity: 112
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 34, 109

Conread position: 267-406
Cow position:
Alignm length: 146
Alignm identity: 116
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 34, 0

Conread position: 267-406
Cow position:
Alignm length: 142
Alignm identity: 109
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 65, 26

Conread position: 267-407
Cow position:
Alignm length: 142
Alignm identity: 112
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 40, 52

Conread position: 267-407
Cow position:
Alignm length: 144
Alignm identity: 116
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 36, 132

Conread position: 267-407
Cow position:
Alignm length: 142
Alignm identity: 121
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 39, 57

Conread position: 267-407
Cow position:
Alignm length: 142
Alignm identity: 114
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 36, 58

Conread position: 267-408
Cow position:
Alignm length: 146
Alignm identity: 111
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 36, 130

Conread position: 267-408
Cow position:
Alignm length: 143
Alignm identity: 107
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 34, 131

Conread position: 267-408
Cow position:
Alignm length: 142
Alignm identity: 106
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 35, 0

Conread position: 267-408
Cow position:
Alignm length: 150
Alignm identity: 113
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 34, 0

Conread position: 267-408
Cow position:
Alignm length: 146
Alignm identity: 110
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 36, 0

Conread position: 267-408
Cow position:
Alignm length: 143
Alignm identity: 116
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 34, 61

Conread position: 267-409
Cow position:
Alignm length: 144
Alignm identity: 112
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 34, 46

Conread position: 267-409
Cow position:
Alignm length: 150
Alignm identity: 118
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 35, 0

Conread position: 267-409
Cow position:
Alignm length: 148
Alignm identity: 118
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 34, 26

Conread position: 267-410
Cow position:
Alignm length: 147
Alignm identity: 113
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 36, 98

Conread position: 267-411
Cow position:
Alignm length: 150
Alignm identity: 115
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 34, 83

Conread position: 267-412
Cow position:
Alignm length: 147
Alignm identity: 114
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 34, 53

Conread position: 267-412
Cow position:
Alignm length: 155
Alignm identity: 119
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 26, 0

Conread position: 267-412
Cow position:
Alignm length: 153
Alignm identity: 116
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 34, 139

Conread position: 267-412
Cow position:
Alignm length: 156
Alignm identity: 119
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 35, 0

Conread position: 267-412
Cow position:
Alignm length: 149
Alignm identity: 113
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 35, 0

Conread position: 267-412
Cow position:
Alignm length: 148
Alignm identity: 111
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 34, 85

Conread position: 267-412
Cow position:
Alignm length: 146
Alignm identity: 115
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 40, 0

Conread position: 267-412
Cow position:
Alignm length: 155
Alignm identity: 120
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 36, 0

Conread position: 267-414
Cow position:
Alignm length: 151
Alignm identity: 118
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 34, 45

Conread position: 267-420
Cow position:
Alignm length: 156
Alignm identity: 117
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 34, 74

Conread position: 267-424
Cow position:
Alignm length: 162
Alignm identity: 119
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 33, 43

Conread position: 267-426
Cow position:
Alignm length: 164
Alignm identity: 120
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 36, 65

Conread position: 267-429
Cow position:
Alignm length: 172
Alignm identity: 126
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 41, 0

Conread position: 267-437
Cow position:
Alignm length: 173
Alignm identity: 129
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 34, 132

Conread position: 267-442
Cow position:
Alignm length: 178
Alignm identity: 131
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 34, 131

Conread position: 267-456
Cow position:
Alignm length: 191
Alignm identity: 141
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 34, 47

Conread position: 267-470
Cow position:
Alignm length: 208
Alignm identity: 151
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 34, 51

Conread position: 267-477
Cow position:
Alignm length: 211
Alignm identity: 149
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 64, 0

Conread position: 268-397
Cow position:
Alignm length: 131
Alignm identity: 102
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 33, 64

Conread position: 268-397
Cow position:
Alignm length: 133
Alignm identity: 103
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 33, 0

Conread position: 268-409
Cow position:
Alignm length: 149
Alignm identity: 113
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 42, 108

Conread position: 268-410
Cow position:
Alignm length: 144
Alignm identity: 112
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 35, 52

Conread position: 268-412
Cow position:
Alignm length: 145
Alignm identity: 106
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 129, 0

Conread position: 268-412
Cow position:
Alignm length: 152
Alignm identity: 113
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 33, 0

Conread position: 268-412
Cow position:
Alignm length: 147
Alignm identity: 112
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 68, 133

Conread position: 268-413
Cow position:
Alignm length: 152
Alignm identity: 117
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 55, 34

Conread position: 268-415
Cow position:
Alignm length: 155
Alignm identity: 123
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 51, 136

Conread position: 268-420
Cow position:
Alignm length: 156
Alignm identity: 120
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 33, 134

Conread position: 268-431
Cow position:
Alignm length: 166
Alignm identity: 126
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 33, 57

Conread position: 268-439
Cow position:
Alignm length: 179
Alignm identity: 132
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 8, 52

Conread position: 269-382
Cow position:
Alignm length: 115
Alignm identity: 96
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 32, 56

Conread position: 269-409
Cow position:
Alignm length: 141
Alignm identity: 109
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 78, 0

Conread position: 269-413
Cow position:
Alignm length: 149
Alignm identity: 118
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 32, 64

Conread position: 270-419
Cow position:
Alignm length: 150
Alignm identity: 113
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 25, 0

Conread position: 271-383
Cow position:
Alignm length: 116
Alignm identity: 92
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 30, 0

Conread position: 271-390
Cow position:
Alignm length: 121
Alignm identity: 100
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 30, 54

Conread position: 271-391
Cow position:
Alignm length: 122
Alignm identity: 95
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 36, 54

Conread position: 271-397
Cow position:
Alignm length: 128
Alignm identity: 98
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 30, 61

Conread position: 271-397
Cow position:
Alignm length: 130
Alignm identity: 102
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 30, 62

Conread position: 271-397
Cow position:
Alignm length: 128
Alignm identity: 101
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 30, 54

Conread position: 271-397
Cow position:
Alignm length: 128
Alignm identity: 103
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 31, 54

Conread position: 271-400
Cow position:
Alignm length: 133
Alignm identity: 111
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 30, 0

Conread position: 271-421
Cow position:
Alignm length: 157
Alignm identity: 124
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 30, 131

Conread position: 272-391
Cow position:
Alignm length: 121
Alignm identity: 98
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 29, 53

Conread position: 272-397
Cow position:
Alignm length: 128
Alignm identity: 105
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 29, 0

Conread position: 273-412
Cow position:
Alignm length: 142
Alignm identity: 107
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 22, 129

Conread position: 273-478
Cow position:
Alignm length: 209
Alignm identity: 148
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 28, 161

Conread position: 276-398
Cow position:
Alignm length: 127
Alignm identity: 102
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 29, 0

Conread position: 276-408
Cow position:
Alignm length: 134
Alignm identity: 102
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 30, 56

Conread position: 276-408
Cow position:
Alignm length: 137
Alignm identity: 107
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 28, 18

Conread position: 276-420
Cow position:
Alignm length: 150
Alignm identity: 114
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 31, 128

Conread position: 276-427
Cow position:
Alignm length: 157
Alignm identity: 117
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 27, 0

Conread position: 277-409
Cow position:
Alignm length: 138
Alignm identity: 106
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 26, 121

Conread position: 277-411
Cow position:
Alignm length: 136
Alignm identity: 109
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 24, 18

Conread position: 277-420
Cow position:
Alignm length: 146
Alignm identity: 111
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 24, 123

Conread position: 279-400
Cow position:
Alignm length: 123
Alignm identity: 100
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 24, 53

Conread position: 280-480
Cow position:
Alignm length: 202
Alignm identity: 143
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 24, 52

Conread position: 284-465
Cow position:
Alignm length: 183
Alignm identity: 131
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 19, 48

Conread position: 285-397
Cow position:
Alignm length: 118
Alignm identity: 95
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 18, 0

Conread position: 288-412
Cow position:
Alignm length: 134
Alignm identity: 108
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 13, 0

Conread position: 293-390
Cow position:
Alignm length: 99
Alignm identity: 85
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 8, 32

Conread position: 293-435
Cow position:
Alignm length: 151
Alignm identity: 115
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 8, 0

Conread position: 298-406
Cow position:
Alignm length: 110
Alignm identity: 88
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 63, 0

Conread position: 300-412
Cow position:
Alignm length: 117
Alignm identity: 95
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 25, 0

Conread position: 320-420
Cow position:
Alignm length: 101
Alignm identity: 85
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 79, 0

Show alignments to all cow chromosomes.