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Cow genome map

           
Conread name:
           
Ss1.1-rcov33b_m10.5
        

               
Conread position:
               
218-387
               

               
Cow position:
               
chr13:24155489-24155312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
16, 8
               

               
Conread position:
               
249-408
               

               
Cow position:
               
chr13:3003414-3003267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
6, 0
               

               
Conread position:
               
255-425
               

               
Cow position:
               
chr13:8637633-8637462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
48, 149
               

               
Conread position:
               
256-419
               

               
Cow position:
               
chr13:24753821-24753664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
45, 63
               

               
Conread position:
               
257-414
               

               
Cow position:
               
chr13:53138368-53138216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
21, 64
               

               
Conread position:
               
259-425
               

               
Cow position:
               
chr13:9613000-9612842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
42, 60
               

               
Conread position:
               
264-384
               

               
Cow position:
               
chr13:7104580-7104460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
122
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
37, 58
               

               
Conread position:
               
264-397
               

               
Cow position:
               
chr13:36876986-36876857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
265-410
               

               
Cow position:
               
chr13:971972-972119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
265-412
               

               
Cow position:
               
chr13:22729477-22729631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
267-381
               

               
Cow position:
               
chr13:1037562-1037445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
118
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
267-386
               

               
Cow position:
               
chr13:57446196-57446310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
122
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
30, 25
               

               
Conread position:
               
267-393
               

               
Cow position:
               
chr13:8667542-8667411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
267-394
               

               
Cow position:
               
chr13:13265484-13265359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
267-394
               

               
Cow position:
               
chr13:14644974-14644848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
34, 57
               

               
Conread position:
               
267-394
               

               
Cow position:
               
chr13:52027214-52027341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
36, 57
               

               
Conread position:
               
267-395
               

               
Cow position:
               
chr13:8537745-8537612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
267-395
               

               
Cow position:
               
chr13:57323069-57322943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
34, 53
               

               
Conread position:
               
267-396
               

               
Cow position:
               
chr13:20288261-20288131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
267-396
               

               
Cow position:
               
chr13:52177523-52177395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
54, 65
               

               
Conread position:
               
267-397
               

               
Cow position:
               
chr13:5671663-5671794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
267-397
               

               
Cow position:
               
chr13:6980843-6980717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
267-397
               

               
Cow position:
               
chr13:8699814-8699951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
267-397
               

               
Cow position:
               
chr13:10040637-10040764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
31, 11
               

               
Conread position:
               
267-397
               

               
Cow position:
               
chr13:14782265-14782140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
40, 58
               

               
Conread position:
               
267-397
               

               
Cow position:
               
chr13:15192963-15193096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
267-397
               

               
Cow position:
               
chr13:18058327-18058455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
267-397
               

               
Cow position:
               
chr13:19223578-19223443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
267-397
               

               
Cow position:
               
chr13:20784513-20784386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
34, 58
               

               
Conread position:
               
267-397
               

               
Cow position:
               
chr13:20854533-20854668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
267-397
               

               
Cow position:
               
chr13:23478825-23478692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
267-397
               

               
Cow position:
               
chr13:23795464-23795587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
34, 13
               

               
Conread position:
               
267-397
               

               
Cow position:
               
chr13:23823111-23823238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
267-397
               

               
Cow position:
               
chr13:28081645-28081508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
267-397
               

               
Cow position:
               
chr13:29665944-29665809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
267-397
               

               
Cow position:
               
chr13:37723504-37723380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
34, 59
               

               
Conread position:
               
267-397
               

               
Cow position:
               
chr13:40483056-40483188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
267-397
               

               
Cow position:
               
chr13:45352954-45352819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
267-397
               

               
Cow position:
               
chr13:53619927-53619792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
267-397
               

               
Cow position:
               
chr13:54582797-54582666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
267-397
               

               
Cow position:
               
chr13:62008030-62007899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
267-398
               

               
Cow position:
               
chr13:19279018-19278886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
34, 95
               

               
Conread position:
               
267-398
               

               
Cow position:
               
chr13:23399689-23399557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
267-398
               

               
Cow position:
               
chr13:56431902-56432030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
34, 58
               

               
Conread position:
               
267-406
               

               
Cow position:
               
chr13:16908140-16907996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
267-406
               

               
Cow position:
               
chr13:19022194-19022048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
34, 138
               

               
Conread position:
               
267-406
               

               
Cow position:
               
chr13:52536485-52536354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
34, 58
               

               
Conread position:
               
267-407
               

               
Cow position:
               
chr13:1568855-1568717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
31, 75
               

               
Conread position:
               
267-407
               

               
Cow position:
               
chr13:5092471-5092612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
34, 128
               

               
Conread position:
               
267-407
               

               
Cow position:
               
chr13:15991307-15991449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
267-407
               

               
Cow position:
               
chr13:20534819-20534683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
34, 29
               

               
Conread position:
               
267-407
               

               
Cow position:
               
chr13:55494603-55494737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
34, 53
               

               
Conread position:
               
267-408
               

               
Cow position:
               
chr13:15869037-15868890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
267-408
               

               
Cow position:
               
chr13:17158955-17159100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
34, 135
               

               
Conread position:
               
267-408
               

               
Cow position:
               
chr13:17815161-17815026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
267-408
               

               
Cow position:
               
chr13:17823027-17823168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
34, 26
               

               
Conread position:
               
267-408
               

               
Cow position:
               
chr13:24585970-24585829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
267-408
               

               
Cow position:
               
chr13:28536394-28536539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
36, 131
               

               
Conread position:
               
267-408
               

               
Cow position:
               
chr13:31507521-31507665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
92, 64
               

               
Conread position:
               
267-408
               

               
Cow position:
               
chr13:41979217-41979355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
34, 66
               

               
Conread position:
               
267-408
               

               
Cow position:
               
chr13:43342491-43342349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
52, 132
               

               
Conread position:
               
267-408
               

               
Cow position:
               
chr13:44201930-44201790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
34, 26
               

               
Conread position:
               
267-408
               

               
Cow position:
               
chr13:45439454-45439314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
34, 55
               

               
Conread position:
               
267-408
               

               
Cow position:
               
chr13:49283857-49283996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
34, 53
               

               
Conread position:
               
267-409
               

               
Cow position:
               
chr13:6974084-6973942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
267-409
               

               
Cow position:
               
chr13:16714342-16714484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
65, 122
               

               
Conread position:
               
267-409
               

               
Cow position:
               
chr13:18197685-18197831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
267-409
               

               
Cow position:
               
chr13:27180964-27180817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
267-409
               

               
Cow position:
               
chr13:47243628-47243769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
35, 121
               

               
Conread position:
               
267-410
               

               
Cow position:
               
chr13:37946466-37946608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
36, 52
               

               
Conread position:
               
267-411
               

               
Cow position:
               
chr13:1462369-1462519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
34, 102
               

               
Conread position:
               
267-411
               

               
Cow position:
               
chr13:60375562-60375708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
40, 60
               

               
Conread position:
               
267-412
               

               
Cow position:
               
chr13:9551284-9551138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
36, 65
               

               
Conread position:
               
267-412
               

               
Cow position:
               
chr13:13088952-13088806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
130, 65
               

               
Conread position:
               
267-412
               

               
Cow position:
               
chr13:14063598-14063743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
34, 131
               

               
Conread position:
               
267-412
               

               
Cow position:
               
chr13:24230137-24229987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
34, 123
               

               
Conread position:
               
267-412
               

               
Cow position:
               
chr13:34261154-34261013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
34, 58
               

               
Conread position:
               
267-412
               

               
Cow position:
               
chr13:52055669-52055813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
36, 90
               

               
Conread position:
               
267-413
               

               
Cow position:
               
chr13:10986578-10986731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
34, 138
               

               
Conread position:
               
267-413
               

               
Cow position:
               
chr13:37069268-37069117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
267-413
               

               
Cow position:
               
chr13:57986015-57986158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
34, 47
               

               
Conread position:
               
267-414
               

               
Cow position:
               
chr13:17813394-17813248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
36, 85
               

               
Conread position:
               
267-414
               

               
Cow position:
               
chr13:18092951-18093093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
34, 52
               

               
Conread position:
               
267-414
               

               
Cow position:
               
chr13:41806695-41806553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
34, 91
               

               
Conread position:
               
267-414
               

               
Cow position:
               
chr13:42200542-42200398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
39, 64
               

               
Conread position:
               
267-420
               

               
Cow position:
               
chr13:5659844-5659994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
35, 57
               

               
Conread position:
               
267-420
               

               
Cow position:
               
chr13:8367641-8367490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
36, 133
               

               
Conread position:
               
267-420
               

               
Cow position:
               
chr13:13796888-13797051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
267-420
               

               
Cow position:
               
chr13:21170449-21170297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
34, 65
               

               
Conread position:
               
267-420
               

               
Cow position:
               
chr13:25313226-25313378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
66, 95
               

               
Conread position:
               
267-420
               

               
Cow position:
               
chr13:45499152-45499000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
36, 65
               

               
Conread position:
               
267-420
               

               
Cow position:
               
chr13:62304494-62304340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
34, 135
               

               
Conread position:
               
267-421
               

               
Cow position:
               
chr13:25924299-25924457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
34, 137
               

               
Conread position:
               
267-421
               

               
Cow position:
               
chr13:33854761-33854912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
34, 105
               

               
Conread position:
               
267-422
               

               
Cow position:
               
chr13:15257444-15257604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
34, 113
               

               
Conread position:
               
267-424
               

               
Cow position:
               
chr13:19393215-19393060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
34, 97
               

               
Conread position:
               
267-425
               

               
Cow position:
               
chr13:26698575-26698738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
34, 59
               

               
Conread position:
               
267-426
               

               
Cow position:
               
chr13:11231371-11231533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
34, 134
               

               
Conread position:
               
267-427
               

               
Cow position:
               
chr13:43576937-43576768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
267-428
               

               
Cow position:
               
chr13:14576136-14575977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
16, 21
               

               
Conread position:
               
267-435
               

               
Cow position:
               
chr13:9707826-9707999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
39, 8
               

               
Conread position:
               
267-436
               

               
Cow position:
               
chr13:30148640-30148808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
36, 57
               

               
Conread position:
               
267-438
               

               
Cow position:
               
chr13:13320720-13320551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
34, 148
               

               
Conread position:
               
267-439
               

               
Cow position:
               
chr13:54128673-54128843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
61, 89
               

               
Conread position:
               
267-448
               

               
Cow position:
               
chr13:38035761-38035580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
34, 53
               

               
Conread position:
               
267-450
               

               
Cow position:
               
chr13:6951502-6951325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
34, 107
               

               
Conread position:
               
267-465
               

               
Cow position:
               
chr13:9108752-9108947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
190, 64
               

               
Conread position:
               
267-468
               

               
Cow position:
               
chr13:26480281-26480479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
45, 107
               

               
Conread position:
               
267-477
               

               
Cow position:
               
chr13:16525299-16525523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
268-384
               

               
Cow position:
               
chr13:20042338-20042459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
122
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
268-396
               

               
Cow position:
               
chr13:10522859-10522732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
33, 64
               

               
Conread position:
               
268-397
               

               
Cow position:
               
chr13:6189678-6189808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
268-397
               

               
Cow position:
               
chr13:28605469-28605603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
268-397
               

               
Cow position:
               
chr13:53847199-53847327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
38, 56
               

               
Conread position:
               
268-402
               

               
Cow position:
               
chr13:11260197-11260064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
33, 57
               

               
Conread position:
               
268-409
               

               
Cow position:
               
chr13:38396079-38395934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
268-410
               

               
Cow position:
               
chr13:11565759-11565616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
33, 57
               

               
Conread position:
               
268-412
               

               
Cow position:
               
chr13:7097508-7097362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
268-420
               

               
Cow position:
               
chr13:242557-242399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
268-421
               

               
Cow position:
               
chr13:9124847-9124694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
35, 12
               

               
Conread position:
               
268-426
               

               
Cow position:
               
chr13:20820915-20821076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
268-428
               

               
Cow position:
               
chr13:20217476-20217641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
268-443
               

               
Cow position:
               
chr13:17021803-17021984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
33, 153
               

               
Conread position:
               
268-443
               

               
Cow position:
               
chr13:41474794-41474619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
33, 90
               

               
Conread position:
               
268-447
               

               
Cow position:
               
chr13:50622890-50623068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
64, 89
               

               
Conread position:
               
270-409
               

               
Cow position:
               
chr13:46330016-46330157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
14, 133
               

               
Conread position:
               
271-397
               

               
Cow position:
               
chr13:15289002-15289127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
30, 54
               

               
Conread position:
               
271-397
               

               
Cow position:
               
chr13:18166651-18166524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
271-397
               

               
Cow position:
               
chr13:37554954-37555079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
30, 53
               

               
Conread position:
               
271-397
               

               
Cow position:
               
chr13:37614277-37614406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
271-397
               

               
Cow position:
               
chr13:38329535-38329410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
30, 61
               

               
Conread position:
               
271-397
               

               
Cow position:
               
chr13:52477727-52477853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
30, 59
               

               
Conread position:
               
271-402
               

               
Cow position:
               
chr13:4664938-4665063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
271-407
               

               
Cow position:
               
chr13:25817446-25817312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
30, 53
               

               
Conread position:
               
271-420
               

               
Cow position:
               
chr13:15162713-15162864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
32, 133
               

               
Conread position:
               
271-420
               

               
Cow position:
               
chr13:21981055-21981197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
30, 9
               

               
Conread position:
               
271-423
               

               
Cow position:
               
chr13:18340452-18340297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
30, 126
               

               
Conread position:
               
271-435
               

               
Cow position:
               
chr13:21242165-21242328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
30, 53
               

               
Conread position:
               
271-436
               

               
Cow position:
               
chr13:15239591-15239757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
30, 125
               

               
Conread position:
               
271-449
               

               
Cow position:
               
chr13:58157138-58157320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
47, 127
               

               
Conread position:
               
271-464
               

               
Cow position:
               
chr13:19883117-19883307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
31, 61
               

               
Conread position:
               
272-387
               

               
Cow position:
               
chr13:20090450-20090565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
116
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
272-397
               

               
Cow position:
               
chr13:21288167-21288293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
272-405
               

               
Cow position:
               
chr13:6926435-6926296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
272-413
               

               
Cow position:
               
chr13:21275777-21275636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
29, 90
               

               
Conread position:
               
272-414
               

               
Cow position:
               
chr13:27198826-27198685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
29, 53
               

               
Conread position:
               
272-416
               

               
Cow position:
               
chr13:10711497-10711637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
29, 108
               

               
Conread position:
               
272-419
               

               
Cow position:
               
chr13:15757040-15756887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
29, 132
               

               
Conread position:
               
273-394
               

               
Cow position:
               
chr13:9492690-9492571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
123
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
28, 98
               

               
Conread position:
               
273-399
               

               
Cow position:
               
chr13:55765263-55765386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
273-408
               

               
Cow position:
               
chr13:24715158-24715030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
29, 52
               

               
Conread position:
               
273-420
               

               
Cow position:
               
chr13:25926707-25926558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
30, 127
               

               
Conread position:
               
273-461
               

               
Cow position:
               
chr13:6113609-6113802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
27, 160
               

               
Conread position:
               
276-393
               

               
Cow position:
               
chr13:43577905-43577783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
123
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
276-396
               

               
Cow position:
               
chr13:56958895-56958769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
276-397
               

               
Cow position:
               
chr13:40541191-40541317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
276-398
               

               
Cow position:
               
chr13:55081056-55080929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
276-416
               

               
Cow position:
               
chr13:14351497-14351352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
276-420
               

               
Cow position:
               
chr13:1339227-1339378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
21, 17
               

               
Conread position:
               
276-420
               

               
Cow position:
               
chr13:10220875-10220727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
33, 126
               

               
Conread position:
               
280-408
               

               
Cow position:
               
chr13:17015211-17015339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
21, 34
               

               
Conread position:
               
280-450
               

               
Cow position:
               
chr13:584960-585139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
282-397
               

               
Cow position:
               
chr13:30809465-30809583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
284-410
               

               
Cow position:
               
chr13:4037826-4037701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
19, 65
               

               
Conread position:
               
285-397
               

               
Cow position:
               
chr13:5263376-5263487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
114
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
13, 47
               

               
Conread position:
               
285-405
               

               
Cow position:
               
chr13:21012874-21012750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
15, 113
               

               
Conread position:
               
287-391
               

               
Cow position:
               
chr13:18875039-18874930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
110
               

               
Alignm identity:
               
91
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
287-408
               

               
Cow position:
               
chr13:49795945-49795820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
10, 6
               

               
Conread position:
               
288-421
               

               
Cow position:
               
chr13:37030254-37030121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
41, 115
               

               
Conread position:
               
292-413
               

               
Cow position:
               
chr13:21425925-21426040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
123
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
9, 33
               

               
Conread position:
               
296-420
               

               
Cow position:
               
chr13:40794448-40794564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
5, 28
               

               
Conread position:
               
297-408
               

               
Cow position:
               
chr13:12673396-12673507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
112
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
300-399
               

               
Cow position:
               
chr13:620355-620458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
104
               

               
Alignm identity:
               
86
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
308-421
               

               
Cow position:
               
chr13:20653977-20654092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
118
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
21, 95
               

               
Conread position:
               
311-457
               

               
Cow position:
               
chr13:33974624-33974471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
320-407
               

               
Cow position:
               
chr13:11591288-11591200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
89
               

               
Alignm identity:
               
77
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
333-468
               

               
Cow position:
               
chr13:62024977-62025113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
96, 64
               
Show alignments to all cow chromosomes.