Cow genome map

Conread name: Ss1.1-rcov33b_m10.5

Conread position: 250-439
Cow position:
Alignm length: 195
Alignm identity: 141
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 53, 74

Conread position: 254-409
Cow position:
Alignm length: 157
Alignm identity: 119
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 51, 70

Conread position: 255-397
Cow position:
Alignm length: 144
Alignm identity: 108
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 17, 77

Conread position: 255-412
Cow position:
Alignm length: 165
Alignm identity: 126
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 48, 6

Conread position: 256-451
Cow position:
Alignm length: 200
Alignm identity: 147
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 45, 145

Conread position: 264-397
Cow position:
Alignm length: 139
Alignm identity: 106
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 32, 0

Conread position: 264-398
Cow position:
Alignm length: 136
Alignm identity: 107
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 8, 0

Conread position: 265-396
Cow position:
Alignm length: 141
Alignm identity: 109
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 36, 0

Conread position: 265-398
Cow position:
Alignm length: 136
Alignm identity: 111
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 37, 60

Conread position: 265-420
Cow position:
Alignm length: 166
Alignm identity: 123
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 37, 0

Conread position: 267-385
Cow position:
Alignm length: 120
Alignm identity: 94
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 36, 0

Conread position: 267-387
Cow position:
Alignm length: 122
Alignm identity: 101
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 34, 58

Conread position: 267-390
Cow position:
Alignm length: 126
Alignm identity: 101
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 34, 0

Conread position: 267-391
Cow position:
Alignm length: 126
Alignm identity: 98
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 43, 65

Conread position: 267-391
Cow position:
Alignm length: 130
Alignm identity: 102
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 36, 0

Conread position: 267-396
Cow position:
Alignm length: 131
Alignm identity: 105
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 34, 55

Conread position: 267-396
Cow position:
Alignm length: 131
Alignm identity: 104
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 36, 0

Conread position: 267-397
Cow position:
Alignm length: 136
Alignm identity: 104
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 36, 0

Conread position: 267-397
Cow position:
Alignm length: 131
Alignm identity: 99
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 65, 0

Conread position: 267-397
Cow position:
Alignm length: 133
Alignm identity: 112
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 65, 51

Conread position: 267-397
Cow position:
Alignm length: 132
Alignm identity: 101
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 37, 65

Conread position: 267-397
Cow position:
Alignm length: 132
Alignm identity: 106
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 34, 66

Conread position: 267-397
Cow position:
Alignm length: 136
Alignm identity: 104
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 33, 0

Conread position: 267-397
Cow position:
Alignm length: 135
Alignm identity: 107
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 34, 57

Conread position: 267-397
Cow position:
Alignm length: 132
Alignm identity: 102
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 34, 0

Conread position: 267-397
Cow position:
Alignm length: 132
Alignm identity: 105
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 36, 58

Conread position: 267-397
Cow position:
Alignm length: 136
Alignm identity: 106
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 36, 0

Conread position: 267-397
Cow position:
Alignm length: 134
Alignm identity: 112
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 34, 0

Conread position: 267-397
Cow position:
Alignm length: 132
Alignm identity: 102
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 35, 57

Conread position: 267-397
Cow position:
Alignm length: 132
Alignm identity: 106
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 35, 0

Conread position: 267-397
Cow position:
Alignm length: 134
Alignm identity: 106
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 34, 112

Conread position: 267-397
Cow position:
Alignm length: 132
Alignm identity: 105
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 34, 47

Conread position: 267-398
Cow position:
Alignm length: 133
Alignm identity: 102
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 34, 101

Conread position: 267-398
Cow position:
Alignm length: 137
Alignm identity: 105
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 35, 0

Conread position: 267-400
Cow position:
Alignm length: 137
Alignm identity: 109
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 35, 0

Conread position: 267-406
Cow position:
Alignm length: 142
Alignm identity: 112
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 34, 67

Conread position: 267-406
Cow position:
Alignm length: 141
Alignm identity: 109
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 34, 59

Conread position: 267-407
Cow position:
Alignm length: 142
Alignm identity: 106
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 34, 55

Conread position: 267-407
Cow position:
Alignm length: 142
Alignm identity: 107
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 34, 0

Conread position: 267-408
Cow position:
Alignm length: 143
Alignm identity: 115
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 40, 13

Conread position: 267-408
Cow position:
Alignm length: 145
Alignm identity: 110
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 36, 129

Conread position: 267-408
Cow position:
Alignm length: 147
Alignm identity: 112
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 36, 0

Conread position: 267-408
Cow position:
Alignm length: 143
Alignm identity: 117
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 35, 51

Conread position: 267-409
Cow position:
Alignm length: 145
Alignm identity: 108
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 35, 132

Conread position: 267-409
Cow position:
Alignm length: 149
Alignm identity: 116
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 30, 26

Conread position: 267-410
Cow position:
Alignm length: 145
Alignm identity: 109
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 34, 23

Conread position: 267-412
Cow position:
Alignm length: 154
Alignm identity: 118
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 34, 140

Conread position: 267-412
Cow position:
Alignm length: 151
Alignm identity: 112
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 33, 0

Conread position: 267-412
Cow position:
Alignm length: 148
Alignm identity: 114
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 29, 41

Conread position: 267-412
Cow position:
Alignm length: 149
Alignm identity: 116
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 35, 56

Conread position: 267-412
Cow position:
Alignm length: 147
Alignm identity: 112
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 35, 52

Conread position: 267-412
Cow position:
Alignm length: 151
Alignm identity: 115
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 34, 137

Conread position: 267-413
Cow position:
Alignm length: 147
Alignm identity: 114
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 26, 0

Conread position: 267-413
Cow position:
Alignm length: 151
Alignm identity: 111
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 58, 133

Conread position: 267-414
Cow position:
Alignm length: 153
Alignm identity: 113
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 36, 126

Conread position: 267-415
Cow position:
Alignm length: 150
Alignm identity: 114
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 34, 45

Conread position: 267-420
Cow position:
Alignm length: 156
Alignm identity: 114
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 43, 0

Conread position: 267-420
Cow position:
Alignm length: 156
Alignm identity: 124
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 34, 27

Conread position: 267-420
Cow position:
Alignm length: 156
Alignm identity: 122
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 34, 0

Conread position: 267-420
Cow position:
Alignm length: 157
Alignm identity: 118
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 36, 102

Conread position: 267-420
Cow position:
Alignm length: 155
Alignm identity: 116
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 34, 86

Conread position: 267-421
Cow position:
Alignm length: 158
Alignm identity: 117
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 43, 12

Conread position: 267-421
Cow position:
Alignm length: 157
Alignm identity: 125
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 34, 27

Conread position: 267-425
Cow position:
Alignm length: 162
Alignm identity: 121
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 16, 21

Conread position: 267-426
Cow position:
Alignm length: 162
Alignm identity: 116
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 43, 134

Conread position: 267-452
Cow position:
Alignm length: 190
Alignm identity: 136
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 35, 57

Conread position: 267-462
Cow position:
Alignm length: 196
Alignm identity: 141
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 64, 0

Conread position: 267-474
Cow position:
Alignm length: 214
Alignm identity: 147
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 36, 136

Conread position: 268-387
Cow position:
Alignm length: 122
Alignm identity: 96
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 33, 57

Conread position: 268-391
Cow position:
Alignm length: 128
Alignm identity: 101
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 33, 0

Conread position: 268-394
Cow position:
Alignm length: 130
Alignm identity: 104
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 13, 69

Conread position: 268-397
Cow position:
Alignm length: 133
Alignm identity: 112
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 33, 0

Conread position: 268-397
Cow position:
Alignm length: 135
Alignm identity: 106
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 35, 25

Conread position: 268-397
Cow position:
Alignm length: 135
Alignm identity: 108
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 33, 10

Conread position: 268-406
Cow position:
Alignm length: 142
Alignm identity: 105
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 34, 0

Conread position: 268-408
Cow position:
Alignm length: 141
Alignm identity: 103
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 51, 0

Conread position: 268-412
Cow position:
Alignm length: 146
Alignm identity: 113
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 33, 57

Conread position: 268-414
Cow position:
Alignm length: 148
Alignm identity: 115
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 33, 53

Conread position: 268-420
Cow position:
Alignm length: 154
Alignm identity: 116
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 33, 52

Conread position: 268-424
Cow position:
Alignm length: 158
Alignm identity: 123
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 33, 57

Conread position: 268-424
Cow position:
Alignm length: 158
Alignm identity: 114
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 35, 52

Conread position: 268-426
Cow position:
Alignm length: 165
Alignm identity: 126
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 13, 119

Conread position: 270-397
Cow position:
Alignm length: 129
Alignm identity: 102
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 33, 62

Conread position: 270-408
Cow position:
Alignm length: 145
Alignm identity: 111
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 32, 129

Conread position: 270-445
Cow position:
Alignm length: 182
Alignm identity: 135
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 5, 113

Conread position: 271-392
Cow position:
Alignm length: 123
Alignm identity: 97
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 30, 86

Conread position: 271-398
Cow position:
Alignm length: 132
Alignm identity: 106
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 57, 0

Conread position: 271-411
Cow position:
Alignm length: 144
Alignm identity: 113
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 33, 0

Conread position: 271-434
Cow position:
Alignm length: 169
Alignm identity: 123
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 30, 0

Conread position: 271-464
Cow position:
Alignm length: 201
Alignm identity: 145
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 30, 124

Conread position: 272-396
Cow position:
Alignm length: 127
Alignm identity: 100
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 29, 62

Conread position: 272-414
Cow position:
Alignm length: 148
Alignm identity: 110
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 30, 0

Conread position: 272-446
Cow position:
Alignm length: 177
Alignm identity: 126
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 29, 127

Conread position: 273-397
Cow position:
Alignm length: 130
Alignm identity: 101
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 30, 0

Conread position: 273-408
Cow position:
Alignm length: 141
Alignm identity: 113
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 30, 103

Conread position: 273-408
Cow position:
Alignm length: 144
Alignm identity: 111
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 37, 0

Conread position: 273-408
Cow position:
Alignm length: 141
Alignm identity: 107
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 30, 124

Conread position: 273-408
Cow position:
Alignm length: 141
Alignm identity: 112
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 30, 11

Conread position: 273-410
Cow position:
Alignm length: 139
Alignm identity: 106
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 28, 66

Conread position: 273-412
Cow position:
Alignm length: 142
Alignm identity: 111
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 34, 59

Conread position: 275-412
Cow position:
Alignm length: 145
Alignm identity: 112
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 28, 0

Conread position: 276-427
Cow position:
Alignm length: 161
Alignm identity: 124
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 27, 151

Conread position: 277-391
Cow position:
Alignm length: 120
Alignm identity: 97
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 24, 0

Conread position: 277-422
Cow position:
Alignm length: 149
Alignm identity: 109
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 24, 0

Conread position: 279-428
Cow position:
Alignm length: 151
Alignm identity: 121
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 22, 121

Conread position: 280-397
Cow position:
Alignm length: 122
Alignm identity: 96
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 48, 0

Conread position: 280-397
Cow position:
Alignm length: 123
Alignm identity: 98
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 23, 0

Conread position: 281-396
Cow position:
Alignm length: 117
Alignm identity: 95
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 20, 44

Conread position: 281-413
Cow position:
Alignm length: 135
Alignm identity: 105
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 42, 53

Conread position: 285-420
Cow position:
Alignm length: 140
Alignm identity: 107
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 43, 111

Conread position: 287-397
Cow position:
Alignm length: 112
Alignm identity: 94
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 14, 0

Conread position: 287-416
Cow position:
Alignm length: 134
Alignm identity: 105
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 108, 44

Conread position: 294-397
Cow position:
Alignm length: 104
Alignm identity: 87
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 6, 0

Conread position: 294-420
Cow position:
Alignm length: 133
Alignm identity: 105
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 9, 0

Conread position: 296-397
Cow position:
Alignm length: 105
Alignm identity: 87
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 5, 0

Conread position: 297-410
Cow position:
Alignm length: 118
Alignm identity: 94
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 41, 0

Conread position: 299-420
Cow position:
Alignm length: 122
Alignm identity: 96
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 98, 0

Conread position: 302-425
Cow position:
Alignm length: 126
Alignm identity: 100
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 97, 21

Conread position: 303-397
Cow position:
Alignm length: 95
Alignm identity: 79
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 325-447
Cow position:
Alignm length: 123
Alignm identity: 99
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 72, 0

Show alignments to all cow chromosomes.