Cow genome map

Conread name: Ss1.1-rcov33b_m10.5

Conread position: 15-317
Cow position:
Alignm length: 321
Alignm identity: 233
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 11, 109

Conread position: 254-409
Cow position:
Alignm length: 162
Alignm identity: 124
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 47, 149

Conread position: 254-412
Cow position:
Alignm length: 167
Alignm identity: 122
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 47, 143

Conread position: 255-402
Cow position:
Alignm length: 156
Alignm identity: 118
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 54, 0

Conread position: 257-420
Cow position:
Alignm length: 168
Alignm identity: 123
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 45, 14

Conread position: 264-391
Cow position:
Alignm length: 133
Alignm identity: 106
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 38, 0

Conread position: 265-402
Cow position:
Alignm length: 139
Alignm identity: 107
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 116, 42

Conread position: 267-387
Cow position:
Alignm length: 123
Alignm identity: 95
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 34, 0

Conread position: 267-387
Cow position:
Alignm length: 122
Alignm identity: 98
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 34, 50

Conread position: 267-390
Cow position:
Alignm length: 129
Alignm identity: 100
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 36, 0

Conread position: 267-391
Cow position:
Alignm length: 130
Alignm identity: 102
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 36, 0

Conread position: 267-391
Cow position:
Alignm length: 129
Alignm identity: 102
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 34, 109

Conread position: 267-395
Cow position:
Alignm length: 130
Alignm identity: 100
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 34, 106

Conread position: 267-395
Cow position:
Alignm length: 130
Alignm identity: 101
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 40, 58

Conread position: 267-396
Cow position:
Alignm length: 139
Alignm identity: 111
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 34, 115

Conread position: 267-396
Cow position:
Alignm length: 130
Alignm identity: 100
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 267-397
Cow position:
Alignm length: 133
Alignm identity: 111
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 34, 59

Conread position: 267-397
Cow position:
Alignm length: 132
Alignm identity: 103
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 34, 105

Conread position: 267-397
Cow position:
Alignm length: 133
Alignm identity: 109
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 35, 57

Conread position: 267-397
Cow position:
Alignm length: 134
Alignm identity: 107
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 34, 0

Conread position: 267-397
Cow position:
Alignm length: 136
Alignm identity: 104
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 36, 0

Conread position: 267-397
Cow position:
Alignm length: 133
Alignm identity: 102
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 34, 67

Conread position: 267-397
Cow position:
Alignm length: 132
Alignm identity: 102
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 40, 0

Conread position: 267-397
Cow position:
Alignm length: 134
Alignm identity: 102
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 35, 0

Conread position: 267-397
Cow position:
Alignm length: 131
Alignm identity: 103
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 66, 0

Conread position: 267-397
Cow position:
Alignm length: 135
Alignm identity: 112
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 34, 0

Conread position: 267-397
Cow position:
Alignm length: 132
Alignm identity: 102
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 37, 94

Conread position: 267-397
Cow position:
Alignm length: 132
Alignm identity: 105
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 34, 65

Conread position: 267-397
Cow position:
Alignm length: 132
Alignm identity: 103
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 34, 57

Conread position: 267-398
Cow position:
Alignm length: 137
Alignm identity: 106
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 35, 0

Conread position: 267-399
Cow position:
Alignm length: 139
Alignm identity: 108
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 36, 132

Conread position: 267-401
Cow position:
Alignm length: 138
Alignm identity: 110
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 59, 40

Conread position: 267-405
Cow position:
Alignm length: 146
Alignm identity: 112
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 33, 0

Conread position: 267-407
Cow position:
Alignm length: 146
Alignm identity: 115
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 33, 135

Conread position: 267-407
Cow position:
Alignm length: 143
Alignm identity: 107
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 34, 120

Conread position: 267-408
Cow position:
Alignm length: 143
Alignm identity: 107
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 37, 131

Conread position: 267-408
Cow position:
Alignm length: 146
Alignm identity: 116
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 34, 134

Conread position: 267-408
Cow position:
Alignm length: 147
Alignm identity: 117
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 36, 23

Conread position: 267-408
Cow position:
Alignm length: 151
Alignm identity: 117
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 35, 47

Conread position: 267-409
Cow position:
Alignm length: 143
Alignm identity: 108
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 55, 0

Conread position: 267-409
Cow position:
Alignm length: 144
Alignm identity: 107
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 34, 59

Conread position: 267-409
Cow position:
Alignm length: 146
Alignm identity: 109
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 35, 133

Conread position: 267-409
Cow position:
Alignm length: 150
Alignm identity: 121
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 35, 137

Conread position: 267-409
Cow position:
Alignm length: 147
Alignm identity: 110
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 56, 0

Conread position: 267-409
Cow position:
Alignm length: 144
Alignm identity: 109
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 39, 131

Conread position: 267-409
Cow position:
Alignm length: 151
Alignm identity: 117
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 39, 140

Conread position: 267-410
Cow position:
Alignm length: 147
Alignm identity: 117
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 34, 0

Conread position: 267-410
Cow position:
Alignm length: 144
Alignm identity: 111
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 44, 0

Conread position: 267-411
Cow position:
Alignm length: 146
Alignm identity: 109
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 34, 58

Conread position: 267-412
Cow position:
Alignm length: 152
Alignm identity: 118
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 36, 0

Conread position: 267-412
Cow position:
Alignm length: 149
Alignm identity: 117
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 54, 135

Conread position: 267-412
Cow position:
Alignm length: 150
Alignm identity: 112
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 36, 0

Conread position: 267-412
Cow position:
Alignm length: 147
Alignm identity: 113
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 35, 10

Conread position: 267-412
Cow position:
Alignm length: 156
Alignm identity: 118
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 35, 140

Conread position: 267-412
Cow position:
Alignm length: 151
Alignm identity: 119
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 36, 0

Conread position: 267-413
Cow position:
Alignm length: 148
Alignm identity: 117
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 37, 0

Conread position: 267-413
Cow position:
Alignm length: 149
Alignm identity: 115
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 34, 59

Conread position: 267-414
Cow position:
Alignm length: 155
Alignm identity: 119
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 40, 0

Conread position: 267-417
Cow position:
Alignm length: 152
Alignm identity: 118
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 34, 58

Conread position: 267-419
Cow position:
Alignm length: 156
Alignm identity: 114
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 35, 65

Conread position: 267-419
Cow position:
Alignm length: 161
Alignm identity: 121
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 35, 0

Conread position: 267-419
Cow position:
Alignm length: 170
Alignm identity: 129
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 35, 0

Conread position: 267-420
Cow position:
Alignm length: 159
Alignm identity: 115
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 40, 0

Conread position: 267-420
Cow position:
Alignm length: 155
Alignm identity: 123
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 36, 66

Conread position: 267-420
Cow position:
Alignm length: 156
Alignm identity: 118
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 38, 59

Conread position: 267-420
Cow position:
Alignm length: 162
Alignm identity: 121
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 42, 0

Conread position: 267-420
Cow position:
Alignm length: 159
Alignm identity: 120
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 35, 137

Conread position: 267-420
Cow position:
Alignm length: 159
Alignm identity: 117
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 36, 131

Conread position: 267-420
Cow position:
Alignm length: 160
Alignm identity: 122
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 36, 10

Conread position: 267-420
Cow position:
Alignm length: 155
Alignm identity: 115
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 34, 10

Conread position: 267-421
Cow position:
Alignm length: 164
Alignm identity: 126
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 9, 15

Conread position: 267-422
Cow position:
Alignm length: 165
Alignm identity: 125
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 34, 156

Conread position: 267-422
Cow position:
Alignm length: 160
Alignm identity: 124
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 34, 109

Conread position: 267-423
Cow position:
Alignm length: 162
Alignm identity: 118
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 36, 0

Conread position: 267-424
Cow position:
Alignm length: 159
Alignm identity: 116
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 35, 58

Conread position: 267-425
Cow position:
Alignm length: 161
Alignm identity: 121
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 40, 66

Conread position: 267-431
Cow position:
Alignm length: 165
Alignm identity: 117
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 66, 0

Conread position: 267-438
Cow position:
Alignm length: 176
Alignm identity: 133
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 35, 66

Conread position: 267-448
Cow position:
Alignm length: 183
Alignm identity: 138
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 151, 50

Conread position: 267-456
Cow position:
Alignm length: 197
Alignm identity: 149
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 35, 27

Conread position: 268-394
Cow position:
Alignm length: 128
Alignm identity: 102
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 33, 65

Conread position: 268-397
Cow position:
Alignm length: 130
Alignm identity: 106
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 27, 0

Conread position: 268-397
Cow position:
Alignm length: 131
Alignm identity: 105
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 33, 54

Conread position: 268-397
Cow position:
Alignm length: 131
Alignm identity: 105
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 33, 64

Conread position: 268-398
Cow position:
Alignm length: 136
Alignm identity: 107
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 35, 0

Conread position: 268-412
Cow position:
Alignm length: 148
Alignm identity: 111
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 33, 56

Conread position: 268-412
Cow position:
Alignm length: 146
Alignm identity: 111
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 39, 104

Conread position: 268-413
Cow position:
Alignm length: 146
Alignm identity: 115
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 64, 0

Conread position: 268-420
Cow position:
Alignm length: 154
Alignm identity: 122
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 33, 25

Conread position: 269-408
Cow position:
Alignm length: 142
Alignm identity: 109
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 5, 56

Conread position: 271-397
Cow position:
Alignm length: 132
Alignm identity: 108
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 30, 0

Conread position: 271-397
Cow position:
Alignm length: 132
Alignm identity: 102
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 30, 125

Conread position: 271-398
Cow position:
Alignm length: 129
Alignm identity: 100
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 30, 53

Conread position: 271-408
Cow position:
Alignm length: 140
Alignm identity: 109
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 7, 0

Conread position: 271-412
Cow position:
Alignm length: 143
Alignm identity: 111
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 30, 51

Conread position: 271-414
Cow position:
Alignm length: 146
Alignm identity: 115
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 31, 130

Conread position: 271-424
Cow position:
Alignm length: 164
Alignm identity: 126
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 30, 0

Conread position: 272-413
Cow position:
Alignm length: 145
Alignm identity: 113
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 30, 60

Conread position: 273-397
Cow position:
Alignm length: 130
Alignm identity: 102
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 27, 0

Conread position: 273-397
Cow position:
Alignm length: 126
Alignm identity: 104
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 29, 20

Conread position: 273-397
Cow position:
Alignm length: 133
Alignm identity: 105
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 30, 0

Conread position: 273-408
Cow position:
Alignm length: 139
Alignm identity: 112
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 28, 47

Conread position: 273-408
Cow position:
Alignm length: 138
Alignm identity: 106
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 31, 52

Conread position: 273-408
Cow position:
Alignm length: 143
Alignm identity: 113
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 28, 0

Conread position: 273-420
Cow position:
Alignm length: 151
Alignm identity: 119
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 29, 51

Conread position: 273-421
Cow position:
Alignm length: 153
Alignm identity: 120
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 28, 130

Conread position: 274-397
Cow position:
Alignm length: 128
Alignm identity: 103
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 54, 0

Conread position: 275-396
Cow position:
Alignm length: 124
Alignm identity: 98
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 26, 51

Conread position: 275-409
Cow position:
Alignm length: 135
Alignm identity: 105
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 276-397
Cow position:
Alignm length: 123
Alignm identity: 97
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 27, 0

Conread position: 276-420
Cow position:
Alignm length: 151
Alignm identity: 114
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 25, 122

Conread position: 277-419
Cow position:
Alignm length: 144
Alignm identity: 114
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 24, 123

Conread position: 278-421
Cow position:
Alignm length: 149
Alignm identity: 119
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 25, 16

Conread position: 280-396
Cow position:
Alignm length: 118
Alignm identity: 96
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 21, 13

Conread position: 285-399
Cow position:
Alignm length: 117
Alignm identity: 93
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 18, 110

Conread position: 285-420
Cow position:
Alignm length: 139
Alignm identity: 106
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 16, 117

Conread position: 286-413
Cow position:
Alignm length: 129
Alignm identity: 100
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 15, 34

Conread position: 287-412
Cow position:
Alignm length: 133
Alignm identity: 104
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 15, 0

Conread position: 293-412
Cow position:
Alignm length: 124
Alignm identity: 97
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 104, 0

Conread position: 295-408
Cow position:
Alignm length: 119
Alignm identity: 96
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 15, 0

Conread position: 295-408
Cow position:
Alignm length: 115
Alignm identity: 91
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 104, 0

Conread position: 385-588
Cow position:
Alignm length: 210
Alignm identity: 149
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 18, 46

Show alignments to all cow chromosomes.