Cow genome map

Conread name: Ss1.1-rcov33b_m10.5

Conread position: 218-412
Cow position: chr20:28818878-28818686 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 137
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 47, 28

Conread position: 248-442
Cow position: chr20:36741550-36741742 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 143
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 55, 8

Conread position: 263-397
Cow position: chr20:25009531-25009396 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 107
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 39, 0

Conread position: 264-397
Cow position: chr20:17524374-17524512 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 108
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 40, 0

Conread position: 264-397
Cow position: chr20:29754878-29755015 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 109
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 65, 0

Conread position: 264-407
Cow position: chr20:27315080-27315223 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 115
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 39, 50

Conread position: 264-408
Cow position: chr20:8556167-8556018 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 113
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 37, 0

Conread position: 264-412
Cow position: chr20:5365028-5365182 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 120
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 39, 122

Conread position: 264-421
Cow position: chr20:20590199-20590045 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 120
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 37, 68

Conread position: 264-436
Cow position: chr20:18379480-18379650 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 127
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 37, 134

Conread position: 265-397
Cow position: chr20:398203-398075 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 102
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 59, 0

Conread position: 265-417
Cow position: chr20:40578564-40578417 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 118
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 45, 19

Conread position: 266-420
Cow position: chr20:25021531-25021689 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 120
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 37, 139

Conread position: 267-383
Cow position: chr20:31746531-31746413 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 94
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 36, 0

Conread position: 267-387
Cow position: chr20:6849000-6849122 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 98
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 36, 47

Conread position: 267-387
Cow position: chr20:33067255-33067132 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 97
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 39, 0

Conread position: 267-392
Cow position: chr20:7426092-7425966 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 100
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 35, 0

Conread position: 267-394
Cow position: chr20:12126199-12126067 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 113
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 34, 0

Conread position: 267-394
Cow position: chr20:12420514-12420385 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 101
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 34, 0

Conread position: 267-396
Cow position: chr20:18500632-18500766 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 104
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 36, 0

Conread position: 267-396
Cow position: chr20:29845156-29845291 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 108
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 59, 0

Conread position: 267-397
Cow position: chr20:7738126-7737997 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 106
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 34, 61

Conread position: 267-397
Cow position: chr20:19201636-19201771 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 105
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 37, 0

Conread position: 267-397
Cow position: chr20:19636071-19635941 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 103
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 34, 58

Conread position: 267-397
Cow position: chr20:23358390-23358257 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 103
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 34, 0

Conread position: 267-397
Cow position: chr20:24883259-24883123 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 106
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 37, 0

Conread position: 267-397
Cow position: chr20:33435050-33434922 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 109
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 62, 17

Conread position: 267-399
Cow position: chr20:32847450-32847581 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 103
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 35, 57

Conread position: 267-408
Cow position: chr20:3255141-3255282 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 113
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 22, 58

Conread position: 267-408
Cow position: chr20:10200451-10200597 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 111
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 36, 0

Conread position: 267-408
Cow position: chr20:13023397-13023255 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 108
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 33, 127

Conread position: 267-408
Cow position: chr20:13805426-13805563 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 111
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 34, 57

Conread position: 267-408
Cow position: chr20:19746076-19746218 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 111
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 34, 133

Conread position: 267-408
Cow position: chr20:20158241-20158380 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 110
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 34, 66

Conread position: 267-408
Cow position: chr20:23506040-23506185 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 113
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 36, 0

Conread position: 267-408
Cow position: chr20:28605314-28605453 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 109
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 34, 65

Conread position: 267-408
Cow position: chr20:31468557-31468408 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 116
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 36, 0

Conread position: 267-408
Cow position: chr20:37357961-37358106 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 113
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 36, 131

Conread position: 267-408
Cow position: chr20:40303782-40303635 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 113
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 35, 137

Conread position: 267-409
Cow position: chr20:39016767-39016621 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 112
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 41, 131

Conread position: 267-410
Cow position: chr20:12581849-12581707 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 119
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 35, 47

Conread position: 267-412
Cow position: chr20:3599295-3599151 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 118
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 18, 106

Conread position: 267-412
Cow position: chr20:14755735-14755591 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 111
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 36, 57

Conread position: 267-412
Cow position: chr20:14806992-14807133 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 115
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 34, 44

Conread position: 267-412
Cow position: chr20:16977739-16977587 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 118
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 34, 141

Conread position: 267-412
Cow position: chr20:21169657-21169516 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 112
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 34, 58

Conread position: 267-412
Cow position: chr20:26040993-26040845 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 110
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 34, 0

Conread position: 267-413
Cow position: chr20:11499113-11499254 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 119
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 40, 0

Conread position: 267-417
Cow position: chr20:5702829-5702985 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 121
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 34, 66

Conread position: 267-420
Cow position: chr20:3141679-3141837 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 119
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 61, 110

Conread position: 267-420
Cow position: chr20:14490351-14490498 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 115
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 34, 65

Conread position: 267-420
Cow position: chr20:21279491-21279642 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 116
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 35, 58

Conread position: 267-421
Cow position: chr20:7934387-7934539 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 113
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 36, 65

Conread position: 267-425
Cow position: chr20:10208914-10209067 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 123
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 34, 19

Conread position: 267-425
Cow position: chr20:17251822-17251986 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 121
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 33, 0

Conread position: 267-427
Cow position: chr20:9376574-9376728 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 124
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 34, 53

Conread position: 267-427
Cow position: chr20:14980400-14980240 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 130
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 146, 126

Conread position: 267-428
Cow position: chr20:20984097-20984263 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 125
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 34, 139

Conread position: 267-435
Cow position: chr20:2316320-2316159 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 134
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 34, 58

Conread position: 267-453
Cow position: chr20:16566402-16566585 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 134
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 139, 58

Conread position: 267-460
Cow position: chr20:4945149-4944955 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 145
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 36, 138

Conread position: 267-467
Cow position: chr20:4931186-4931382 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 144
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 34, 14

Conread position: 268-396
Cow position: chr20:20898484-20898353 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 107
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 34, 0

Conread position: 268-396
Cow position: chr20:35442176-35442045 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 101
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 35, 0

Conread position: 268-397
Cow position: chr20:4892013-4891881 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 104
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 33, 0

Conread position: 268-397
Cow position: chr20:21428268-21428395 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 100
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 32, 0

Conread position: 268-397
Cow position: chr20:23846558-23846428 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 105
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 33, 0

Conread position: 268-397
Cow position: chr20:34221585-34221719 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 106
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 60, 30

Conread position: 268-406
Cow position: chr20:4334424-4334293 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 115
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 33, 57

Conread position: 268-406
Cow position: chr20:22923024-22923159 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 110
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 33, 52

Conread position: 268-407
Cow position: chr20:14879895-14880035 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 112
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 34, 57

Conread position: 268-408
Cow position: chr20:7155284-7155424 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 106
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 40, 114

Conread position: 268-420
Cow position: chr20:38430910-38430761 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 113
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 33, 46

Conread position: 268-421
Cow position: chr20:6054403-6054243 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 120
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 35, 94

Conread position: 268-441
Cow position: chr20:5078378-5078557 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 137
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 35, 94

Conread position: 269-463
Cow position: chr20:3502616-3502806 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 141
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 32, 19

Conread position: 270-397
Cow position: chr20:24491915-24491790 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 100
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 61, 0

Conread position: 270-398
Cow position: chr20:14620193-14620068 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 102
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 31, 44

Conread position: 271-398
Cow position: chr20:11135644-11135514 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 102
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 37, 0

Conread position: 271-405
Cow position: chr20:17515525-17515394 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 105
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 127, 53

Conread position: 271-407
Cow position: chr20:6240412-6240273 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 116
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 31, 0

Conread position: 271-408
Cow position: chr20:35605316-35605450 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 111
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 31, 63

Conread position: 271-408
Cow position: chr20:38061657-38061525 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 110
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 30, 53

Conread position: 271-454
Cow position: chr20:21941543-21941724 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 136
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 30, 45

Conread position: 273-397
Cow position: chr20:23879996-23879869 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 100
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 30, 0

Conread position: 273-420
Cow position: chr20:34097842-34097690 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 120
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 30, 131

Conread position: 273-425
Cow position: chr20:11008281-11008439 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 119
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 34, 0

Conread position: 276-389
Cow position: chr20:354787-354669 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 97
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 27, 0

Conread position: 276-408
Cow position: chr20:14283034-14283170 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 107
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 27, 122

Conread position: 276-420
Cow position: chr20:14433307-14433163 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 114
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 53, 35

Conread position: 279-409
Cow position: chr20:27407776-27407646 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 101
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 22, 99

Conread position: 282-402
Cow position: chr20:3148804-3148923 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 97
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 19, 74

Conread position: 285-409
Cow position: chr20:11909564-11909437 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 103
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 18, 104

Conread position: 285-419
Cow position: chr20:19623121-19622984 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 109
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 18, 40

Conread position: 285-421
Cow position: chr20:9034096-9033957 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 109
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 16, 113

Conread position: 286-415
Cow position: chr20:2298666-2298538 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 105
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 15, 34

Conread position: 289-397
Cow position: chr20:7659102-7658988 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 95
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 12, 0

Conread position: 290-406
Cow position: chr20:1999513-1999630 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 94
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 11, 0

Conread position: 294-406
Cow position: chr20:6048434-6048318 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 95
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 7, 0

Conread position: 294-415
Cow position: chr20:24000147-24000019 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 106
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 9, 0

Conread position: 296-420
Cow position: chr20:17764982-17764862 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 100
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 7, 27

Conread position: 299-410
Cow position: chr20:32550385-32550273 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 94
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 20, 103

Conread position: 300-444
Cow position: chr20:25464906-25464764 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 108
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 93, 0

Conread position: 301-421
Cow position: chr20:15489433-15489551 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 94
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 23, 0

Show alignments to all cow chromosomes.