Cow genome map

Conread name: Ss1.1-rcov33b_m10.5

Conread position: 250-386
Cow position:
Alignm length: 139
Alignm identity: 105
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 56, 18

Conread position: 250-426
Cow position:
Alignm length: 185
Alignm identity: 132
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 65, 45

Conread position: 254-415
Cow position:
Alignm length: 169
Alignm identity: 126
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 48, 56

Conread position: 257-387
Cow position:
Alignm length: 136
Alignm identity: 105
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 43, 117

Conread position: 258-396
Cow position:
Alignm length: 141
Alignm identity: 114
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 5, 42

Conread position: 259-401
Cow position:
Alignm length: 145
Alignm identity: 110
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 37, 20

Conread position: 264-406
Cow position:
Alignm length: 146
Alignm identity: 109
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 39, 136

Conread position: 264-408
Cow position:
Alignm length: 147
Alignm identity: 113
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 61, 135

Conread position: 266-397
Cow position:
Alignm length: 134
Alignm identity: 110
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 69, 57

Conread position: 267-380
Cow position:
Alignm length: 118
Alignm identity: 94
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 34, 0

Conread position: 267-386
Cow position:
Alignm length: 121
Alignm identity: 94
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 40, 0

Conread position: 267-386
Cow position:
Alignm length: 125
Alignm identity: 102
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 36, 0

Conread position: 267-386
Cow position:
Alignm length: 121
Alignm identity: 95
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 34, 0

Conread position: 267-387
Cow position:
Alignm length: 122
Alignm identity: 98
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 34, 55

Conread position: 267-390
Cow position:
Alignm length: 129
Alignm identity: 104
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 34, 0

Conread position: 267-396
Cow position:
Alignm length: 130
Alignm identity: 98
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 54, 0

Conread position: 267-396
Cow position:
Alignm length: 131
Alignm identity: 104
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 36, 55

Conread position: 267-396
Cow position:
Alignm length: 131
Alignm identity: 105
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 34, 63

Conread position: 267-397
Cow position:
Alignm length: 132
Alignm identity: 103
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 36, 57

Conread position: 267-397
Cow position:
Alignm length: 133
Alignm identity: 101
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 34, 0

Conread position: 267-397
Cow position:
Alignm length: 133
Alignm identity: 102
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 34, 0

Conread position: 267-397
Cow position:
Alignm length: 131
Alignm identity: 108
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 267-397
Cow position:
Alignm length: 134
Alignm identity: 103
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 75, 0

Conread position: 267-397
Cow position:
Alignm length: 136
Alignm identity: 106
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 35, 0

Conread position: 267-397
Cow position:
Alignm length: 135
Alignm identity: 107
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 54, 0

Conread position: 267-397
Cow position:
Alignm length: 132
Alignm identity: 103
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 34, 53

Conread position: 267-397
Cow position:
Alignm length: 134
Alignm identity: 104
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 34, 0

Conread position: 267-397
Cow position:
Alignm length: 134
Alignm identity: 106
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 34, 0

Conread position: 267-400
Cow position:
Alignm length: 135
Alignm identity: 105
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 34, 0

Conread position: 267-402
Cow position:
Alignm length: 137
Alignm identity: 109
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 34, 47

Conread position: 267-402
Cow position:
Alignm length: 138
Alignm identity: 103
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 40, 0

Conread position: 267-402
Cow position:
Alignm length: 137
Alignm identity: 113
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 34, 53

Conread position: 267-404
Cow position:
Alignm length: 139
Alignm identity: 106
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 56, 123

Conread position: 267-406
Cow position:
Alignm length: 142
Alignm identity: 115
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 36, 132

Conread position: 267-407
Cow position:
Alignm length: 143
Alignm identity: 115
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 34, 58

Conread position: 267-407
Cow position:
Alignm length: 142
Alignm identity: 114
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 35, 58

Conread position: 267-407
Cow position:
Alignm length: 142
Alignm identity: 117
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 40, 0

Conread position: 267-407
Cow position:
Alignm length: 143
Alignm identity: 115
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 34, 58

Conread position: 267-408
Cow position:
Alignm length: 143
Alignm identity: 110
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 34, 65

Conread position: 267-408
Cow position:
Alignm length: 143
Alignm identity: 113
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 34, 53

Conread position: 267-408
Cow position:
Alignm length: 151
Alignm identity: 118
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 40, 0

Conread position: 267-408
Cow position:
Alignm length: 143
Alignm identity: 109
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 34, 131

Conread position: 267-408
Cow position:
Alignm length: 143
Alignm identity: 113
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 35, 56

Conread position: 267-408
Cow position:
Alignm length: 143
Alignm identity: 113
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 34, 47

Conread position: 267-408
Cow position:
Alignm length: 143
Alignm identity: 107
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 34, 55

Conread position: 267-408
Cow position:
Alignm length: 146
Alignm identity: 114
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 36, 57

Conread position: 267-408
Cow position:
Alignm length: 144
Alignm identity: 109
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 34, 0

Conread position: 267-408
Cow position:
Alignm length: 149
Alignm identity: 116
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 34, 0

Conread position: 267-408
Cow position:
Alignm length: 146
Alignm identity: 108
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 34, 0

Conread position: 267-409
Cow position:
Alignm length: 149
Alignm identity: 114
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 36, 136

Conread position: 267-409
Cow position:
Alignm length: 146
Alignm identity: 119
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 34, 133

Conread position: 267-410
Cow position:
Alignm length: 149
Alignm identity: 121
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 34, 52

Conread position: 267-412
Cow position:
Alignm length: 150
Alignm identity: 117
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 35, 0

Conread position: 267-412
Cow position:
Alignm length: 149
Alignm identity: 118
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 34, 57

Conread position: 267-412
Cow position:
Alignm length: 147
Alignm identity: 109
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 36, 131

Conread position: 267-412
Cow position:
Alignm length: 154
Alignm identity: 115
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 34, 0

Conread position: 267-415
Cow position:
Alignm length: 156
Alignm identity: 117
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 33, 133

Conread position: 267-417
Cow position:
Alignm length: 154
Alignm identity: 117
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 34, 56

Conread position: 267-419
Cow position:
Alignm length: 162
Alignm identity: 120
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 41, 0

Conread position: 267-419
Cow position:
Alignm length: 159
Alignm identity: 117
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 34, 135

Conread position: 267-420
Cow position:
Alignm length: 157
Alignm identity: 116
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 40, 140

Conread position: 267-420
Cow position:
Alignm length: 158
Alignm identity: 118
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 36, 131

Conread position: 267-420
Cow position:
Alignm length: 158
Alignm identity: 117
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 40, 14

Conread position: 267-420
Cow position:
Alignm length: 157
Alignm identity: 116
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 35, 0

Conread position: 267-420
Cow position:
Alignm length: 160
Alignm identity: 116
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 36, 0

Conread position: 267-422
Cow position:
Alignm length: 158
Alignm identity: 125
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 34, 101

Conread position: 267-423
Cow position:
Alignm length: 158
Alignm identity: 121
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 34, 53

Conread position: 267-425
Cow position:
Alignm length: 160
Alignm identity: 119
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 132, 62

Conread position: 267-430
Cow position:
Alignm length: 167
Alignm identity: 132
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 34, 136

Conread position: 267-436
Cow position:
Alignm length: 173
Alignm identity: 129
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 36, 0

Conread position: 267-444
Cow position:
Alignm length: 180
Alignm identity: 133
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 28, 64

Conread position: 268-387
Cow position:
Alignm length: 123
Alignm identity: 100
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 33, 0

Conread position: 268-397
Cow position:
Alignm length: 131
Alignm identity: 110
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 33, 0

Conread position: 268-404
Cow position:
Alignm length: 139
Alignm identity: 108
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 36, 64

Conread position: 268-408
Cow position:
Alignm length: 144
Alignm identity: 118
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 33, 57

Conread position: 268-408
Cow position:
Alignm length: 145
Alignm identity: 119
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 33, 57

Conread position: 268-410
Cow position:
Alignm length: 144
Alignm identity: 115
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 33, 62

Conread position: 268-421
Cow position:
Alignm length: 160
Alignm identity: 124
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 34, 106

Conread position: 269-398
Cow position:
Alignm length: 132
Alignm identity: 100
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 46, 18

Conread position: 271-396
Cow position:
Alignm length: 129
Alignm identity: 101
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 30, 0

Conread position: 271-397
Cow position:
Alignm length: 135
Alignm identity: 106
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 31, 0

Conread position: 271-397
Cow position:
Alignm length: 128
Alignm identity: 104
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 30, 53

Conread position: 271-397
Cow position:
Alignm length: 130
Alignm identity: 102
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 36, 0

Conread position: 271-397
Cow position:
Alignm length: 130
Alignm identity: 105
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 30, 0

Conread position: 271-398
Cow position:
Alignm length: 129
Alignm identity: 98
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 30, 0

Conread position: 271-408
Cow position:
Alignm length: 139
Alignm identity: 112
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 30, 54

Conread position: 271-412
Cow position:
Alignm length: 143
Alignm identity: 110
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 30, 127

Conread position: 271-421
Cow position:
Alignm length: 152
Alignm identity: 116
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 37, 51

Conread position: 271-422
Cow position:
Alignm length: 153
Alignm identity: 119
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 30, 54

Conread position: 272-408
Cow position:
Alignm length: 138
Alignm identity: 112
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 36, 0

Conread position: 272-420
Cow position:
Alignm length: 150
Alignm identity: 115
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 31, 54

Conread position: 273-397
Cow position:
Alignm length: 130
Alignm identity: 101
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 34, 0

Conread position: 273-397
Cow position:
Alignm length: 127
Alignm identity: 101
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 28, 0

Conread position: 273-420
Cow position:
Alignm length: 155
Alignm identity: 117
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 30, 0

Conread position: 273-420
Cow position:
Alignm length: 155
Alignm identity: 117
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 30, 0

Conread position: 273-421
Cow position:
Alignm length: 155
Alignm identity: 115
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 28, 0

Conread position: 274-422
Cow position:
Alignm length: 150
Alignm identity: 118
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 27, 51

Conread position: 275-397
Cow position:
Alignm length: 127
Alignm identity: 103
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 26, 61

Conread position: 275-407
Cow position:
Alignm length: 134
Alignm identity: 103
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 26, 47

Conread position: 276-397
Cow position:
Alignm length: 127
Alignm identity: 100
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 27, 0

Conread position: 276-397
Cow position:
Alignm length: 125
Alignm identity: 97
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 27, 0

Conread position: 276-424
Cow position:
Alignm length: 157
Alignm identity: 116
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 30, 0

Conread position: 277-397
Cow position:
Alignm length: 122
Alignm identity: 98
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 24, 56

Conread position: 281-397
Cow position:
Alignm length: 118
Alignm identity: 97
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 20, 49

Conread position: 288-398
Cow position:
Alignm length: 113
Alignm identity: 91
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 20, 0

Conread position: 294-408
Cow position:
Alignm length: 116
Alignm identity: 95
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 7, 104

Conread position: 294-408
Cow position:
Alignm length: 116
Alignm identity: 93
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 9, 25

Conread position: 295-421
Cow position:
Alignm length: 132
Alignm identity: 105
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 8, 107

Conread position: 300-397
Cow position:
Alignm length: 98
Alignm identity: 81
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 302-412
Cow position:
Alignm length: 113
Alignm identity: 93
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 18, 97

Conread position: 320-420
Cow position:
Alignm length: 101
Alignm identity: 86
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 66, 0

Show alignments to all cow chromosomes.