Cow genome map

Conread name: Ss1.1-rcov33b_m10.5

Conread position: 252-412
Cow position: chr26:12940464-12940634 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 127
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 49, 130

Conread position: 256-412
Cow position: chr26:5168461-5168622 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 125
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 46, 0

Conread position: 256-419
Cow position: chr26:3192375-3192217 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 120
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 44, 27

Conread position: 259-397
Cow position: chr26:12537469-12537333 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 106
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 63, 0

Conread position: 264-391
Cow position: chr26:28243905-28244036 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 103
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 64, 0

Conread position: 264-402
Cow position: chr26:4167277-4167133 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 113
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 39, 22

Conread position: 264-417
Cow position: chr26:23097118-23096966 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 125
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 39, 138

Conread position: 264-420
Cow position: chr26:10220152-10219993 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 131
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 38, 102

Conread position: 265-397
Cow position: chr26:1041076-1041213 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 105
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 42, 0

Conread position: 267-387
Cow position: chr26:32566090-32566210 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 96
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 33, 56

Conread position: 267-391
Cow position: chr26:12807221-12807101 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 99
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 56, 0

Conread position: 267-391
Cow position: chr26:29889435-29889310 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 97
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 34, 0

Conread position: 267-392
Cow position: chr26:29664078-29663948 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 105
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 40, 0

Conread position: 267-394
Cow position: chr26:20769930-20770058 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 100
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 34, 0

Conread position: 267-395
Cow position: chr26:17057758-17057883 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 106
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 34, 65

Conread position: 267-396
Cow position: chr26:8695062-8694936 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 104
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 34, 66

Conread position: 267-396
Cow position: chr26:26245091-26244959 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 103
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 34, 20

Conread position: 267-396
Cow position: chr26:31633807-31633941 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 107
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 39, 0

Conread position: 267-396
Cow position: chr26:31888811-31888939 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 100
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 35, 57

Conread position: 267-396
Cow position: chr26:32353641-32353512 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 103
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 34, 72

Conread position: 267-397
Cow position: chr26:13862958-13862828 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 107
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 34, 26

Conread position: 267-397
Cow position: chr26:21243174-21243297 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 106
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 42, 0

Conread position: 267-397
Cow position: chr26:22892366-22892237 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 103
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 34, 58

Conread position: 267-397
Cow position: chr26:33038144-33038015 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 105
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 34, 66

Conread position: 267-398
Cow position: chr26:5836741-5836606 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 103
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 34, 0

Conread position: 267-398
Cow position: chr26:20291613-20291481 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 106
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 34, 0

Conread position: 267-402
Cow position: chr26:32842708-32842568 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 111
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 34, 20

Conread position: 267-407
Cow position: chr26:13800589-13800732 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 108
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 34, 0

Conread position: 267-408
Cow position: chr26:1894301-1894161 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 109
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 36, 65

Conread position: 267-408
Cow position: chr26:6823237-6823381 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 117
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 42, 99

Conread position: 267-408
Cow position: chr26:9099453-9099313 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 109
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 36, 66

Conread position: 267-408
Cow position: chr26:12893348-12893208 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 113
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 34, 20

Conread position: 267-408
Cow position: chr26:19459772-19459920 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 114
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 35, 47

Conread position: 267-408
Cow position: chr26:19591562-19591701 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 110
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 34, 66

Conread position: 267-408
Cow position: chr26:34026958-34026813 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 112
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 41, 131

Conread position: 267-409
Cow position: chr26:8256878-8257025 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 111
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 34, 0

Conread position: 267-409
Cow position: chr26:21822966-21822825 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 112
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 35, 65

Conread position: 267-409
Cow position: chr26:25526328-25526469 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 107
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 36, 57

Conread position: 267-411
Cow position: chr26:4585134-4584989 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 120
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 34, 135

Conread position: 267-411
Cow position: chr26:16796131-16795989 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 121
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 34, 58

Conread position: 267-412
Cow position: chr26:2930180-2930029 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 116
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 36, 140

Conread position: 267-412
Cow position: chr26:21320025-21320171 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 110
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 34, 0

Conread position: 267-412
Cow position: chr26:28423365-28423512 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 110
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 34, 0

Conread position: 267-413
Cow position: chr26:19671555-19671704 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 118
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 62, 31

Conread position: 267-413
Cow position: chr26:28251235-28251378 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 117
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 34, 56

Conread position: 267-417
Cow position: chr26:6714223-6714069 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 119
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 34, 152

Conread position: 267-417
Cow position: chr26:11875142-11874991 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 118
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 45, 104

Conread position: 267-420
Cow position: chr26:28752-28598 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 120
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 36, 65

Conread position: 267-420
Cow position: chr26:647647-647493 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 118
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 34, 137

Conread position: 267-420
Cow position: chr26:27482487-27482327 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 120
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 36, 0

Conread position: 267-420
Cow position: chr26:31173348-31173505 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 117
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 43, 131

Conread position: 267-420
Cow position: chr26:31382399-31382545 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 124
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 37, 52

Conread position: 267-420
Cow position: chr26:33253237-33253083 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 116
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 36, 0

Conread position: 267-421
Cow position: chr26:14905729-14905584 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 119
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 34, 53

Conread position: 267-449
Cow position: chr26:15132716-15132897 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 142
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 27, 137

Conread position: 267-467
Cow position: chr26:34060412-34060613 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 152
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 36, 136

Conread position: 267-476
Cow position: chr26:31137388-31137177 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 153
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 15, 135

Conread position: 268-402
Cow position: chr26:13802191-13802323 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 107
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 39, 57

Conread position: 268-413
Cow position: chr26:25029613-25029761 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 116
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 33, 136

Conread position: 268-449
Cow position: chr26:11800291-11800464 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 137
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 34, 57

Conread position: 270-412
Cow position: chr26:26504819-26504954 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 115
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 38, 50

Conread position: 270-420
Cow position: chr26:17554533-17554387 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 120
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 102, 25

Conread position: 271-406
Cow position: chr26:20846828-20846964 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 111
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 30, 0

Conread position: 271-406
Cow position: chr26:26407707-26407572 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 109
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 25, 52

Conread position: 271-409
Cow position: chr26:16585518-16585649 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 117
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 31, 49

Conread position: 271-411
Cow position: chr26:29900978-29900837 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 113
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 30, 128

Conread position: 271-419
Cow position: chr26:5407062-5407209 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 120
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 31, 105

Conread position: 271-421
Cow position: chr26:20825037-20824885 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 116
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 30, 61

Conread position: 271-435
Cow position: chr26:2994616-2994451 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 121
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 30, 145

Conread position: 271-438
Cow position: chr26:33201987-33201818 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 123
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 30, 0

Conread position: 272-408
Cow position: chr26:31876124-31875983 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 108
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 29, 0

Conread position: 273-390
Cow position: chr26:9501793-9501913 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 102
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 30, 101

Conread position: 273-397
Cow position: chr26:9535601-9535724 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 104
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 28, 51

Conread position: 273-419
Cow position: chr26:7148220-7148065 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 116
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 41, 0

Conread position: 273-443
Cow position: chr26:23623959-23623786 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 128
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 44, 156

Conread position: 273-479
Cow position: chr26:32834494-32834273 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 156
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 28, 202

Conread position: 274-412
Cow position: chr26:34560085-34559947 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 105
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 27, 124

Conread position: 276-410
Cow position: chr26:9662144-9662004 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 111
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 27, 0

Conread position: 276-420
Cow position: chr26:8811215-8811362 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 114
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 22, 128

Conread position: 280-409
Cow position: chr26:10608670-10608799 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 101
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 21, 54

Conread position: 280-413
Cow position: chr26:32518563-32518702 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 111
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 21, 128

Conread position: 285-409
Cow position: chr26:16423689-16423815 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 99
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 18, 111

Conread position: 285-412
Cow position: chr26:26919630-26919764 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 109
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 18, 0

Conread position: 296-410
Cow position: chr26:30955253-30955370 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 96
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 7, 58

Conread position: 300-402
Cow position: chr26:32897764-32897664 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 86
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 23, 0

Show alignments to all cow chromosomes.