Cow genome map


           Conread name:
           Ss1.1-rcov33b_m10.5
        

               Conread position:
               252-412
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               127
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               49, 130
               

               Conread position:
               256-412
               

               Cow position:
               
               

               Alignm length:
               162
               

               Alignm identity:
               125
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               256-419
               

               Cow position:
               
               

               Alignm length:
               165
               

               Alignm identity:
               120
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               44, 27
               

               Conread position:
               259-397
               

               Cow position:
               
               

               Alignm length:
               139
               

               Alignm identity:
               106
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               264-391
               

               Cow position:
               
               

               Alignm length:
               132
               

               Alignm identity:
               103
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               264-402
               

               Cow position:
               
               

               Alignm length:
               146
               

               Alignm identity:
               113
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               39, 22
               

               Conread position:
               264-417
               

               Cow position:
               
               

               Alignm length:
               157
               

               Alignm identity:
               125
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               39, 138
               

               Conread position:
               264-420
               

               Cow position:
               
               

               Alignm length:
               165
               

               Alignm identity:
               131
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               38, 102
               

               Conread position:
               265-397
               

               Cow position:
               
               

               Alignm length:
               138
               

               Alignm identity:
               105
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               267-387
               

               Cow position:
               
               

               Alignm length:
               122
               

               Alignm identity:
               96
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               33, 56
               

               Conread position:
               267-391
               

               Cow position:
               
               

               Alignm length:
               125
               

               Alignm identity:
               99
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               267-391
               

               Cow position:
               
               

               Alignm length:
               126
               

               Alignm identity:
               97
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               267-392
               

               Cow position:
               
               

               Alignm length:
               131
               

               Alignm identity:
               105
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               267-394
               

               Cow position:
               
               

               Alignm length:
               129
               

               Alignm identity:
               100
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               267-395
               

               Cow position:
               
               

               Alignm length:
               130
               

               Alignm identity:
               106
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               34, 65
               

               Conread position:
               267-396
               

               Cow position:
               
               

               Alignm length:
               131
               

               Alignm identity:
               104
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               34, 66
               

               Conread position:
               267-396
               

               Cow position:
               
               

               Alignm length:
               134
               

               Alignm identity:
               103
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               34, 20
               

               Conread position:
               267-396
               

               Cow position:
               
               

               Alignm length:
               135
               

               Alignm identity:
               107
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               267-396
               

               Cow position:
               
               

               Alignm length:
               131
               

               Alignm identity:
               100
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               35, 57
               

               Conread position:
               267-396
               

               Cow position:
               
               

               Alignm length:
               131
               

               Alignm identity:
               103
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               34, 72
               

               Conread position:
               267-397
               

               Cow position:
               
               

               Alignm length:
               132
               

               Alignm identity:
               107
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               34, 26
               

               Conread position:
               267-397
               

               Cow position:
               
               

               Alignm length:
               131
               

               Alignm identity:
               106
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               267-397
               

               Cow position:
               
               

               Alignm length:
               132
               

               Alignm identity:
               103
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               34, 58
               

               Conread position:
               267-397
               

               Cow position:
               
               

               Alignm length:
               132
               

               Alignm identity:
               105
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               34, 66
               

               Conread position:
               267-398
               

               Cow position:
               
               

               Alignm length:
               136
               

               Alignm identity:
               103
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               267-398
               

               Cow position:
               
               

               Alignm length:
               133
               

               Alignm identity:
               106
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               267-402
               

               Cow position:
               
               

               Alignm length:
               142
               

               Alignm identity:
               111
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               34, 20
               

               Conread position:
               267-407
               

               Cow position:
               
               

               Alignm length:
               144
               

               Alignm identity:
               108
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               267-408
               

               Cow position:
               
               

               Alignm length:
               144
               

               Alignm identity:
               109
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               36, 65
               

               Conread position:
               267-408
               

               Cow position:
               
               

               Alignm length:
               146
               

               Alignm identity:
               117
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               42, 99
               

               Conread position:
               267-408
               

               Cow position:
               
               

               Alignm length:
               144
               

               Alignm identity:
               109
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               36, 66
               

               Conread position:
               267-408
               

               Cow position:
               
               

               Alignm length:
               143
               

               Alignm identity:
               113
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               34, 20
               

               Conread position:
               267-408
               

               Cow position:
               
               

               Alignm length:
               150
               

               Alignm identity:
               114
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               35, 47
               

               Conread position:
               267-408
               

               Cow position:
               
               

               Alignm length:
               144
               

               Alignm identity:
               110
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               34, 66
               

               Conread position:
               267-408
               

               Cow position:
               
               

               Alignm length:
               147
               

               Alignm identity:
               112
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               41, 131
               

               Conread position:
               267-409
               

               Cow position:
               
               

               Alignm length:
               148
               

               Alignm identity:
               111
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               267-409
               

               Cow position:
               
               

               Alignm length:
               144
               

               Alignm identity:
               112
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               35, 65
               

               Conread position:
               267-409
               

               Cow position:
               
               

               Alignm length:
               144
               

               Alignm identity:
               107
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               36, 57
               

               Conread position:
               267-411
               

               Cow position:
               
               

               Alignm length:
               148
               

               Alignm identity:
               120
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               34, 135
               

               Conread position:
               267-411
               

               Cow position:
               
               

               Alignm length:
               146
               

               Alignm identity:
               121
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               34, 58
               

               Conread position:
               267-412
               

               Cow position:
               
               

               Alignm length:
               153
               

               Alignm identity:
               116
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               36, 140
               

               Conread position:
               267-412
               

               Cow position:
               
               

               Alignm length:
               147
               

               Alignm identity:
               110
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               267-412
               

               Cow position:
               
               

               Alignm length:
               148
               

               Alignm identity:
               110
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               267-413
               

               Cow position:
               
               

               Alignm length:
               151
               

               Alignm identity:
               118
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               62, 31
               

               Conread position:
               267-413
               

               Cow position:
               
               

               Alignm length:
               148
               

               Alignm identity:
               117
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               34, 56
               

               Conread position:
               267-417
               

               Cow position:
               
               

               Alignm length:
               156
               

               Alignm identity:
               119
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               34, 152
               

               Conread position:
               267-417
               

               Cow position:
               
               

               Alignm length:
               155
               

               Alignm identity:
               118
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               45, 104
               

               Conread position:
               267-420
               

               Cow position:
               
               

               Alignm length:
               157
               

               Alignm identity:
               120
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               36, 65
               

               Conread position:
               267-420
               

               Cow position:
               
               

               Alignm length:
               159
               

               Alignm identity:
               118
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               34, 137
               

               Conread position:
               267-420
               

               Cow position:
               
               

               Alignm length:
               161
               

               Alignm identity:
               120
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               267-420
               

               Cow position:
               
               

               Alignm length:
               159
               

               Alignm identity:
               117
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               43, 131
               

               Conread position:
               267-420
               

               Cow position:
               
               

               Alignm length:
               155
               

               Alignm identity:
               124
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               37, 52
               

               Conread position:
               267-420
               

               Cow position:
               
               

               Alignm length:
               155
               

               Alignm identity:
               116
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               267-421
               

               Cow position:
               
               

               Alignm length:
               156
               

               Alignm identity:
               119
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               34, 53
               

               Conread position:
               267-449
               

               Cow position:
               
               

               Alignm length:
               188
               

               Alignm identity:
               142
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               27, 137
               

               Conread position:
               267-467
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               36, 136
               

               Conread position:
               267-476
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               153
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               15, 135
               

               Conread position:
               268-402
               

               Cow position:
               
               

               Alignm length:
               136
               

               Alignm identity:
               107
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               39, 57
               

               Conread position:
               268-413
               

               Cow position:
               
               

               Alignm length:
               151
               

               Alignm identity:
               116
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               33, 136
               

               Conread position:
               268-449
               

               Cow position:
               
               

               Alignm length:
               184
               

               Alignm identity:
               137
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               34, 57
               

               Conread position:
               270-412
               

               Cow position:
               
               

               Alignm length:
               144
               

               Alignm identity:
               115
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               38, 50
               

               Conread position:
               270-420
               

               Cow position:
               
               

               Alignm length:
               152
               

               Alignm identity:
               120
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               102, 25
               

               Conread position:
               271-406
               

               Cow position:
               
               

               Alignm length:
               137
               

               Alignm identity:
               111
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               271-406
               

               Cow position:
               
               

               Alignm length:
               138
               

               Alignm identity:
               109
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               25, 52
               

               Conread position:
               271-409
               

               Cow position:
               
               

               Alignm length:
               140
               

               Alignm identity:
               117
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               31, 49
               

               Conread position:
               271-411
               

               Cow position:
               
               

               Alignm length:
               143
               

               Alignm identity:
               113
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               30, 128
               

               Conread position:
               271-419
               

               Cow position:
               
               

               Alignm length:
               154
               

               Alignm identity:
               120
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               31, 105
               

               Conread position:
               271-421
               

               Cow position:
               
               

               Alignm length:
               155
               

               Alignm identity:
               116
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               30, 61
               

               Conread position:
               271-435
               

               Cow position:
               
               

               Alignm length:
               168
               

               Alignm identity:
               121
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               30, 145
               

               Conread position:
               271-438
               

               Cow position:
               
               

               Alignm length:
               170
               

               Alignm identity:
               123
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               272-408
               

               Cow position:
               
               

               Alignm length:
               142
               

               Alignm identity:
               108
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               273-390
               

               Cow position:
               
               

               Alignm length:
               123
               

               Alignm identity:
               102
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               30, 101
               

               Conread position:
               273-397
               

               Cow position:
               
               

               Alignm length:
               126
               

               Alignm identity:
               104
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               28, 51
               

               Conread position:
               273-419
               

               Cow position:
               
               

               Alignm length:
               156
               

               Alignm identity:
               116
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               273-443
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               128
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               44, 156
               

               Conread position:
               273-479
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               156
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               28, 202
               

               Conread position:
               274-412
               

               Cow position:
               
               

               Alignm length:
               140
               

               Alignm identity:
               105
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               27, 124
               

               Conread position:
               276-410
               

               Cow position:
               
               

               Alignm length:
               141
               

               Alignm identity:
               111
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               276-420
               

               Cow position:
               
               

               Alignm length:
               150
               

               Alignm identity:
               114
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               22, 128
               

               Conread position:
               280-409
               

               Cow position:
               
               

               Alignm length:
               132
               

               Alignm identity:
               101
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               21, 54
               

               Conread position:
               280-413
               

               Cow position:
               
               

               Alignm length:
               143
               

               Alignm identity:
               111
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               21, 128
               

               Conread position:
               285-409
               

               Cow position:
               
               

               Alignm length:
               128
               

               Alignm identity:
               99
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               18, 111
               

               Conread position:
               285-412
               

               Cow position:
               
               

               Alignm length:
               135
               

               Alignm identity:
               109
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               296-410
               

               Cow position:
               
               

               Alignm length:
               119
               

               Alignm identity:
               96
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               7, 58
               

               Conread position:
               300-402
               

               Cow position:
               
               

               Alignm length:
               103
               

               Alignm identity:
               86
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               23, 0
               
Show alignments to all cow chromosomes.