Cow genome map

Conread name: Ss1.1-rcov33b_m10.5

Conread position: 253-410
Cow position: chr27:1184269-1184423 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 122
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 48, 73

Conread position: 256-441
Cow position: chr27:31386726-31386911 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 138
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 45, 144

Conread position: 257-420
Cow position: chr27:29458237-29458071 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 126
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 21, 147

Conread position: 264-394
Cow position: chr27:6319816-6319687 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 106
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 37, 56

Conread position: 264-397
Cow position: chr27:7935260-7935393 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 110
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 41, 124

Conread position: 265-397
Cow position: chr27:31157708-31157572 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 105
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 56, 0

Conread position: 265-407
Cow position: chr27:20548707-20548563 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 111
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 42, 134

Conread position: 265-447
Cow position: chr27:19653675-19653862 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 136
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 38, 142

Conread position: 267-366
Cow position: chr27:18491450-18491351 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 82
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 267-385
Cow position: chr27:16505016-16505132 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 95
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 40, 57

Conread position: 267-390
Cow position: chr27:19660826-19660697 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 103
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 36, 0

Conread position: 267-390
Cow position: chr27:26909697-26909819 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 102
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 36, 57

Conread position: 267-391
Cow position: chr27:2592436-2592305 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 104
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 36, 0

Conread position: 267-393
Cow position: chr27:31183470-31183338 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 105
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 34, 128

Conread position: 267-394
Cow position: chr27:19452896-19452764 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 104
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 34, 0

Conread position: 267-396
Cow position: chr27:16103705-16103574 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 108
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 34, 13

Conread position: 267-396
Cow position: chr27:23485106-23484979 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 101
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 102, 0

Conread position: 267-396
Cow position: chr27:24693309-24693181 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 105
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 34, 65

Conread position: 267-396
Cow position: chr27:26121654-26121521 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 103
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 36, 0

Conread position: 267-397
Cow position: chr27:178757-178625 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 104
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 35, 0

Conread position: 267-397
Cow position: chr27:426864-426732 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 104
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 34, 0

Conread position: 267-397
Cow position: chr27:4944620-4944744 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 103
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 44, 0

Conread position: 267-397
Cow position: chr27:10307403-10307541 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 107
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 35, 0

Conread position: 267-397
Cow position: chr27:11982751-11982886 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 104
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 36, 0

Conread position: 267-397
Cow position: chr27:12596671-12596544 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 102
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 34, 58

Conread position: 267-397
Cow position: chr27:15867284-15867155 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 103
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 41, 57

Conread position: 267-397
Cow position: chr27:17397560-17397689 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 104
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 34, 58

Conread position: 267-397
Cow position: chr27:20048528-20048399 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 108
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 36, 65

Conread position: 267-397
Cow position: chr27:20283530-20283406 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 102
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 40, 0

Conread position: 267-397
Cow position: chr27:23527607-23527737 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 104
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 34, 53

Conread position: 267-397
Cow position: chr27:23994517-23994653 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 108
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 35, 13

Conread position: 267-397
Cow position: chr27:24223846-24223717 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 105
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 34, 108

Conread position: 267-397
Cow position: chr27:26939971-26939840 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 104
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 34, 67

Conread position: 267-398
Cow position: chr27:20561476-20561349 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 109
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 40, 52

Conread position: 267-399
Cow position: chr27:624324-624458 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 107
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 34, 13

Conread position: 267-406
Cow position: chr27:1778961-1779096 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 110
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 25, 65

Conread position: 267-406
Cow position: chr27:19576429-19576570 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 116
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 34, 57

Conread position: 267-406
Cow position: chr27:26226396-26226535 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 109
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 34, 26

Conread position: 267-406
Cow position: chr27:26314229-26314372 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 107
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 58, 0

Conread position: 267-407
Cow position: chr27:21951084-21951227 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 117
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 36, 134

Conread position: 267-408
Cow position: chr27:4413925-4414064 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 109
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 36, 64

Conread position: 267-408
Cow position: chr27:27449991-27450135 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 113
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 34, 61

Conread position: 267-408
Cow position: chr27:31248715-31248854 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 111
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 23, 29

Conread position: 267-409
Cow position: chr27:19557282-19557142 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 112
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 43, 47

Conread position: 267-409
Cow position: chr27:19992043-19991899 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 111
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 34, 0

Conread position: 267-409
Cow position: chr27:28062304-28062444 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 107
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 34, 56

Conread position: 267-412
Cow position: chr27:8062456-8062603 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 111
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 47, 136

Conread position: 267-412
Cow position: chr27:25790191-25790049 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 116
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 35, 52

Conread position: 267-413
Cow position: chr27:18435239-18435382 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 118
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 34, 66

Conread position: 267-413
Cow position: chr27:21447935-21448077 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 114
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 34, 58

Conread position: 267-414
Cow position: chr27:10979757-10979607 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 114
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 40, 137

Conread position: 267-416
Cow position: chr27:13411475-13411625 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 118
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 41, 19

Conread position: 267-420
Cow position: chr27:2957306-2957156 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 115
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 34, 45

Conread position: 267-420
Cow position: chr27:23477840-23477685 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 117
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 34, 25

Conread position: 267-421
Cow position: chr27:24952060-24952211 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 121
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 34, 100

Conread position: 267-426
Cow position: chr27:16246696-16246535 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 124
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 34, 63

Conread position: 267-427
Cow position: chr27:5227428-5227582 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 120
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 40, 58

Conread position: 267-434
Cow position: chr27:15315413-15315249 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 121
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 36, 65

Conread position: 267-439
Cow position: chr27:6541526-6541351 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 135
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 34, 65

Conread position: 267-442
Cow position: chr27:16965471-16965289 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 137
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 36, 164

Conread position: 267-452
Cow position: chr27:17102790-17102609 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 143
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 34, 13

Conread position: 267-455
Cow position: chr27:16705145-16704957 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 140
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 35, 65

Conread position: 267-478
Cow position: chr27:26467664-26467884 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 152
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 36, 199

Conread position: 268-397
Cow position: chr27:8790850-8790980 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 105
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 35, 84

Conread position: 268-397
Cow position: chr27:11208661-11208795 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 106
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 39, 0

Conread position: 268-404
Cow position: chr27:26323342-26323197 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 111
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 34, 0

Conread position: 268-407
Cow position: chr27:12459182-12459037 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 114
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 33, 0

Conread position: 268-419
Cow position: chr27:15668878-15669034 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 115
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 38, 0

Conread position: 268-420
Cow position: chr27:11133980-11133831 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 115
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 39, 132

Conread position: 270-412
Cow position: chr27:31153668-31153807 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 108
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 31, 102

Conread position: 271-391
Cow position: chr27:7412283-7412162 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 99
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 30, 0

Conread position: 271-394
Cow position: chr27:10581425-10581299 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 109
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 36, 0

Conread position: 271-396
Cow position: chr27:23452352-23452226 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 100
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 26, 22

Conread position: 271-397
Cow position: chr27:31210438-31210312 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 99
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 28, 22

Conread position: 271-409
Cow position: chr27:22220444-22220301 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 112
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 31, 132

Conread position: 271-412
Cow position: chr27:11561666-11561524 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 115
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 31, 112

Conread position: 271-412
Cow position: chr27:22150804-22150945 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 106
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 30, 126

Conread position: 271-413
Cow position: chr27:20897131-20897274 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 105
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 36, 0

Conread position: 272-409
Cow position: chr27:11528820-11528680 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 112
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 29, 129

Conread position: 272-412
Cow position: chr27:25000071-25000219 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 115
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 31, 134

Conread position: 273-390
Cow position: chr27:23177424-23177543 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 96
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 31, 0

Conread position: 273-397
Cow position: chr27:22171188-22171064 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 101
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 29, 67

Conread position: 273-397
Cow position: chr27:27012587-27012458 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 102
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 30, 0

Conread position: 273-409
Cow position: chr27:3498439-3498306 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 105
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 28, 58

Conread position: 273-414
Cow position: chr27:28190312-28190444 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 110
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 40, 0

Conread position: 273-420
Cow position: chr27:22748216-22748071 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 114
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 28, 128

Conread position: 273-421
Cow position: chr27:12284885-12284732 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 120
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 28, 0

Conread position: 273-435
Cow position: chr27:11145767-11145607 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 118
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 33, 0

Conread position: 276-397
Cow position: chr27:26112030-26112156 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 99
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 28, 0

Conread position: 276-398
Cow position: chr27:15865492-15865371 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 97
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 27, 50

Conread position: 278-408
Cow position: chr27:492608-492477 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 101
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 29, 0

Conread position: 280-402
Cow position: chr27:25151975-25151846 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 106
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 21, 0

Conread position: 284-420
Cow position: chr27:28472813-28472956 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 111
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 18, 0

Conread position: 284-421
Cow position: chr27:23860043-23859897 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 114
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 17, 0

Conread position: 286-422
Cow position: chr27:26437246-26437385 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 105
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 14, 0

Conread position: 288-412
Cow position: chr27:14343566-14343687 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 100
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 14, 0

Conread position: 289-414
Cow position: chr27:29614914-29614787 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 103
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 12, 0

Conread position: 294-457
Cow position: chr27:20354469-20354306 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 122
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 9, 109

Conread position: 300-412
Cow position: chr27:20484590-20484477 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 94
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 97, 31

Conread position: 300-414
Cow position: chr27:15697442-15697326 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 97
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 93, 23

Conread position: 306-441
Cow position: chr27:634566-634703 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 108
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 22, 124

Show alignments to all cow chromosomes.