Cow genome map


           Conread name:
           Ss1.1-rcov33b_m10.5
        

               Conread position:
               264-397
               

               Cow position:
               
               

               Alignm length:
               135
               

               Alignm identity:
               105
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               37, 61
               

               Conread position:
               264-397
               

               Cow position:
               
               

               Alignm length:
               135
               

               Alignm identity:
               106
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               265-397
               

               Cow position:
               
               

               Alignm length:
               134
               

               Alignm identity:
               103
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               38, 72
               

               Conread position:
               265-397
               

               Cow position:
               
               

               Alignm length:
               133
               

               Alignm identity:
               105
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               265-408
               

               Cow position:
               
               

               Alignm length:
               145
               

               Alignm identity:
               110
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               42, 89
               

               Conread position:
               266-420
               

               Cow position:
               
               

               Alignm length:
               162
               

               Alignm identity:
               122
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               6, 139
               

               Conread position:
               267-382
               

               Cow position:
               
               

               Alignm length:
               120
               

               Alignm identity:
               97
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               267-385
               

               Cow position:
               
               

               Alignm length:
               120
               

               Alignm identity:
               95
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               34, 105
               

               Conread position:
               267-385
               

               Cow position:
               
               

               Alignm length:
               120
               

               Alignm identity:
               101
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               267-395
               

               Cow position:
               
               

               Alignm length:
               130
               

               Alignm identity:
               103
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               34, 57
               

               Conread position:
               267-396
               

               Cow position:
               
               

               Alignm length:
               131
               

               Alignm identity:
               109
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               62, 32
               

               Conread position:
               267-397
               

               Cow position:
               
               

               Alignm length:
               142
               

               Alignm identity:
               111
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               267-397
               

               Cow position:
               
               

               Alignm length:
               134
               

               Alignm identity:
               105
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               36, 19
               

               Conread position:
               267-397
               

               Cow position:
               
               

               Alignm length:
               135
               

               Alignm identity:
               104
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               267-397
               

               Cow position:
               
               

               Alignm length:
               135
               

               Alignm identity:
               107
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               88, 26
               

               Conread position:
               267-397
               

               Cow position:
               
               

               Alignm length:
               132
               

               Alignm identity:
               103
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               267-397
               

               Cow position:
               
               

               Alignm length:
               133
               

               Alignm identity:
               104
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               267-397
               

               Cow position:
               
               

               Alignm length:
               132
               

               Alignm identity:
               106
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               40, 108
               

               Conread position:
               267-397
               

               Cow position:
               
               

               Alignm length:
               134
               

               Alignm identity:
               104
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               267-397
               

               Cow position:
               
               

               Alignm length:
               132
               

               Alignm identity:
               104
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               267-397
               

               Cow position:
               
               

               Alignm length:
               134
               

               Alignm identity:
               101
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               267-397
               

               Cow position:
               
               

               Alignm length:
               134
               

               Alignm identity:
               102
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               267-397
               

               Cow position:
               
               

               Alignm length:
               132
               

               Alignm identity:
               106
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               34, 58
               

               Conread position:
               267-397
               

               Cow position:
               
               

               Alignm length:
               132
               

               Alignm identity:
               105
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               34, 58
               

               Conread position:
               267-398
               

               Cow position:
               
               

               Alignm length:
               137
               

               Alignm identity:
               115
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               267-400
               

               Cow position:
               
               

               Alignm length:
               137
               

               Alignm identity:
               112
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               34, 79
               

               Conread position:
               267-402
               

               Cow position:
               
               

               Alignm length:
               137
               

               Alignm identity:
               105
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               132, 56
               

               Conread position:
               267-402
               

               Cow position:
               
               

               Alignm length:
               142
               

               Alignm identity:
               112
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               35, 16
               

               Conread position:
               267-406
               

               Cow position:
               
               

               Alignm length:
               142
               

               Alignm identity:
               110
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               40, 57
               

               Conread position:
               267-407
               

               Cow position:
               
               

               Alignm length:
               141
               

               Alignm identity:
               104
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               267-408
               

               Cow position:
               
               

               Alignm length:
               145
               

               Alignm identity:
               111
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               267-408
               

               Cow position:
               
               

               Alignm length:
               150
               

               Alignm identity:
               114
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               267-408
               

               Cow position:
               
               

               Alignm length:
               143
               

               Alignm identity:
               114
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               40, 73
               

               Conread position:
               267-408
               

               Cow position:
               
               

               Alignm length:
               143
               

               Alignm identity:
               109
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               34, 43
               

               Conread position:
               267-409
               

               Cow position:
               
               

               Alignm length:
               148
               

               Alignm identity:
               113
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               40, 137
               

               Conread position:
               267-412
               

               Cow position:
               
               

               Alignm length:
               147
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               34, 133
               

               Conread position:
               267-412
               

               Cow position:
               
               

               Alignm length:
               146
               

               Alignm identity:
               110
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               267-412
               

               Cow position:
               
               

               Alignm length:
               153
               

               Alignm identity:
               117
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               36, 107
               

               Conread position:
               267-412
               

               Cow position:
               
               

               Alignm length:
               147
               

               Alignm identity:
               111
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               34, 130
               

               Conread position:
               267-412
               

               Cow position:
               
               

               Alignm length:
               150
               

               Alignm identity:
               111
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               47, 136
               

               Conread position:
               267-416
               

               Cow position:
               
               

               Alignm length:
               151
               

               Alignm identity:
               112
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               34, 57
               

               Conread position:
               267-419
               

               Cow position:
               
               

               Alignm length:
               154
               

               Alignm identity:
               117
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               34, 53
               

               Conread position:
               267-420
               

               Cow position:
               
               

               Alignm length:
               159
               

               Alignm identity:
               117
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               36, 131
               

               Conread position:
               267-420
               

               Cow position:
               
               

               Alignm length:
               155
               

               Alignm identity:
               122
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               36, 62
               

               Conread position:
               267-421
               

               Cow position:
               
               

               Alignm length:
               162
               

               Alignm identity:
               125
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               36, 99
               

               Conread position:
               267-429
               

               Cow position:
               
               

               Alignm length:
               168
               

               Alignm identity:
               123
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               36, 137
               

               Conread position:
               267-430
               

               Cow position:
               
               

               Alignm length:
               168
               

               Alignm identity:
               128
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               26, 68
               

               Conread position:
               267-435
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               129
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               35, 137
               

               Conread position:
               267-436
               

               Cow position:
               
               

               Alignm length:
               171
               

               Alignm identity:
               125
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               36, 130
               

               Conread position:
               267-436
               

               Cow position:
               
               

               Alignm length:
               171
               

               Alignm identity:
               123
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               35, 65
               

               Conread position:
               267-442
               

               Cow position:
               
               

               Alignm length:
               178
               

               Alignm identity:
               131
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               34, 8
               

               Conread position:
               267-460
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               147
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               36, 135
               

               Conread position:
               267-465
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               142
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               33, 56
               

               Conread position:
               268-397
               

               Cow position:
               
               

               Alignm length:
               132
               

               Alignm identity:
               104
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               33, 55
               

               Conread position:
               268-407
               

               Cow position:
               
               

               Alignm length:
               146
               

               Alignm identity:
               116
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               268-407
               

               Cow position:
               
               

               Alignm length:
               141
               

               Alignm identity:
               108
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               39, 130
               

               Conread position:
               268-409
               

               Cow position:
               
               

               Alignm length:
               143
               

               Alignm identity:
               111
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               33, 129
               

               Conread position:
               268-425
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               126
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               35, 98
               

               Conread position:
               268-428
               

               Cow position:
               
               

               Alignm length:
               164
               

               Alignm identity:
               128
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               33, 65
               

               Conread position:
               269-394
               

               Cow position:
               
               

               Alignm length:
               128
               

               Alignm identity:
               101
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               269-397
               

               Cow position:
               
               

               Alignm length:
               136
               

               Alignm identity:
               106
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               269-407
               

               Cow position:
               
               

               Alignm length:
               141
               

               Alignm identity:
               111
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               32, 54
               

               Conread position:
               270-392
               

               Cow position:
               
               

               Alignm length:
               123
               

               Alignm identity:
               101
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               271-392
               

               Cow position:
               
               

               Alignm length:
               123
               

               Alignm identity:
               97
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               30, 61
               

               Conread position:
               271-405
               

               Cow position:
               
               

               Alignm length:
               136
               

               Alignm identity:
               107
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               30, 54
               

               Conread position:
               271-407
               

               Cow position:
               
               

               Alignm length:
               141
               

               Alignm identity:
               107
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               30, 54
               

               Conread position:
               271-411
               

               Cow position:
               
               

               Alignm length:
               141
               

               Alignm identity:
               112
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               272-397
               

               Cow position:
               
               

               Alignm length:
               129
               

               Alignm identity:
               104
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               29, 51
               

               Conread position:
               272-397
               

               Cow position:
               
               

               Alignm length:
               137
               

               Alignm identity:
               112
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               272-420
               

               Cow position:
               
               

               Alignm length:
               151
               

               Alignm identity:
               111
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               29, 81
               

               Conread position:
               272-421
               

               Cow position:
               
               

               Alignm length:
               150
               

               Alignm identity:
               111
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               273-390
               

               Cow position:
               
               

               Alignm length:
               125
               

               Alignm identity:
               102
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               276-397
               

               Cow position:
               
               

               Alignm length:
               123
               

               Alignm identity:
               98
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               31, 48
               

               Conread position:
               276-408
               

               Cow position:
               
               

               Alignm length:
               134
               

               Alignm identity:
               107
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               25, 121
               

               Conread position:
               276-408
               

               Cow position:
               
               

               Alignm length:
               138
               

               Alignm identity:
               107
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               26, 121
               

               Conread position:
               276-413
               

               Cow position:
               
               

               Alignm length:
               139
               

               Alignm identity:
               111
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               29, 44
               

               Conread position:
               276-414
               

               Cow position:
               
               

               Alignm length:
               140
               

               Alignm identity:
               108
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               27, 124
               

               Conread position:
               276-414
               

               Cow position:
               
               

               Alignm length:
               143
               

               Alignm identity:
               107
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               276-420
               

               Cow position:
               
               

               Alignm length:
               151
               

               Alignm identity:
               114
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               8, 127
               

               Conread position:
               277-417
               

               Cow position:
               
               

               Alignm length:
               142
               

               Alignm identity:
               108
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               280-408
               

               Cow position:
               
               

               Alignm length:
               131
               

               Alignm identity:
               103
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               21, 119
               

               Conread position:
               280-412
               

               Cow position:
               
               

               Alignm length:
               133
               

               Alignm identity:
               100
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               99, 0
               

               Conread position:
               285-425
               

               Cow position:
               
               

               Alignm length:
               146
               

               Alignm identity:
               113
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               18, 119
               

               Conread position:
               286-408
               

               Cow position:
               
               

               Alignm length:
               128
               

               Alignm identity:
               101
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               16, 112
               

               Conread position:
               298-421
               

               Cow position:
               
               

               Alignm length:
               126
               

               Alignm identity:
               104
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               100, 33
               

               Conread position:
               300-431
               

               Cow position:
               
               

               Alignm length:
               134
               

               Alignm identity:
               105
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               38, 101
               

               Conread position:
               338-414
               

               Cow position:
               
               

               Alignm length:
               77
               

               Alignm identity:
               70
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               0, 0
               
Show alignments to all cow chromosomes.