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Cow genome map

           
Conread name:
           
Ss1.1-rcov33b_m10.5
        

               
Conread position:
               
229-397
               

               
Cow position:
               
chr4:2628543-2628716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
229-408
               

               
Cow position:
               
chr4:43909777-43909962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
24, 65
               

               
Conread position:
               
248-397
               

               
Cow position:
               
chr4:46404872-46404725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
53, 124
               

               
Conread position:
               
252-465
               

               
Cow position:
               
chr4:1184797-1185010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
49, 19
               

               
Conread position:
               
255-409
               

               
Cow position:
               
chr4:63596404-63596568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
5, 154
               

               
Conread position:
               
257-397
               

               
Cow position:
               
chr4:61193294-61193158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
110, 15
               

               
Conread position:
               
257-412
               

               
Cow position:
               
chr4:34544351-34544503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
44, 89
               

               
Conread position:
               
267-372
               

               
Cow position:
               
chr4:34562436-34562542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
107
               

               
Alignm identity:
               
88
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
267-383
               

               
Cow position:
               
chr4:34383287-34383166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
122
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
267-385
               

               
Cow position:
               
chr4:42423750-42423631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
267-387
               

               
Cow position:
               
chr4:39091941-39092060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
123
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
30, 26
               

               
Conread position:
               
267-391
               

               
Cow position:
               
chr4:972728-972602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
267-394
               

               
Cow position:
               
chr4:386340-386211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
34, 26
               

               
Conread position:
               
267-394
               

               
Cow position:
               
chr4:15905157-15905289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
267-395
               

               
Cow position:
               
chr4:2770128-2770255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
39, 66
               

               
Conread position:
               
267-395
               

               
Cow position:
               
chr4:59002085-59001954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
267-397
               

               
Cow position:
               
chr4:8675423-8675553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
33, 53
               

               
Conread position:
               
267-397
               

               
Cow position:
               
chr4:19578442-19578569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
34, 90
               

               
Conread position:
               
267-397
               

               
Cow position:
               
chr4:23985070-23984932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
267-397
               

               
Cow position:
               
chr4:30944009-30944140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
267-397
               

               
Cow position:
               
chr4:33838748-33838617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
267-397
               

               
Cow position:
               
chr4:35982054-35982184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
34, 19
               

               
Conread position:
               
267-397
               

               
Cow position:
               
chr4:36290679-36290808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
34, 57
               

               
Conread position:
               
267-397
               

               
Cow position:
               
chr4:37991644-37991775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
267-397
               

               
Cow position:
               
chr4:40392870-40392997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
34, 53
               

               
Conread position:
               
267-397
               

               
Cow position:
               
chr4:41907527-41907396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
267-397
               

               
Cow position:
               
chr4:44854236-44854101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
267-397
               

               
Cow position:
               
chr4:47305132-47305267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
267-397
               

               
Cow position:
               
chr4:48693653-48693781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
37, 53
               

               
Conread position:
               
267-397
               

               
Cow position:
               
chr4:51083283-51083154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
99, 57
               

               
Conread position:
               
267-397
               

               
Cow position:
               
chr4:61286600-61286723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
267-397
               

               
Cow position:
               
chr4:62794309-62794170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
267-397
               

               
Cow position:
               
chr4:63293514-63293644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
34, 25
               

               
Conread position:
               
267-397
               

               
Cow position:
               
chr4:66168277-66168152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
34, 58
               

               
Conread position:
               
267-398
               

               
Cow position:
               
chr4:38944203-38944071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
267-398
               

               
Cow position:
               
chr4:50837756-50837890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
267-398
               

               
Cow position:
               
chr4:59105628-59105498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
34, 58
               

               
Conread position:
               
267-400
               

               
Cow position:
               
chr4:12748358-12748232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
34, 58
               

               
Conread position:
               
267-400
               

               
Cow position:
               
chr4:46494358-46494490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
36, 99
               

               
Conread position:
               
267-402
               

               
Cow position:
               
chr4:508854-508721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
34, 97
               

               
Conread position:
               
267-402
               

               
Cow position:
               
chr4:22331179-22331311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
34, 101
               

               
Conread position:
               
267-402
               

               
Cow position:
               
chr4:22482380-22482512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
34, 58
               

               
Conread position:
               
267-402
               

               
Cow position:
               
chr4:29805319-29805178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
26, 30
               

               
Conread position:
               
267-405
               

               
Cow position:
               
chr4:22101210-22101068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
36, 130
               

               
Conread position:
               
267-405
               

               
Cow position:
               
chr4:43579358-43579222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
36, 108
               

               
Conread position:
               
267-405
               

               
Cow position:
               
chr4:44772988-44772845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
267-406
               

               
Cow position:
               
chr4:14020551-14020694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
267-406
               

               
Cow position:
               
chr4:32601889-32602020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
35, 58
               

               
Conread position:
               
267-406
               

               
Cow position:
               
chr4:34722833-34722689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
267-406
               

               
Cow position:
               
chr4:50131571-50131717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
267-407
               

               
Cow position:
               
chr4:12908428-12908568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
34, 58
               

               
Conread position:
               
267-407
               

               
Cow position:
               
chr4:68590826-68590969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
34, 83
               

               
Conread position:
               
267-408
               

               
Cow position:
               
chr4:348370-348230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
36, 65
               

               
Conread position:
               
267-408
               

               
Cow position:
               
chr4:3421677-3421821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
34, 69
               

               
Conread position:
               
267-408
               

               
Cow position:
               
chr4:8389027-8388882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
36, 82
               

               
Conread position:
               
267-408
               

               
Cow position:
               
chr4:10558591-10558732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
51, 108
               

               
Conread position:
               
267-408
               

               
Cow position:
               
chr4:13919032-13919176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
36, 123
               

               
Conread position:
               
267-408
               

               
Cow position:
               
chr4:19200167-19200302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
35, 63
               

               
Conread position:
               
267-408
               

               
Cow position:
               
chr4:29384181-29384045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
7, 59
               

               
Conread position:
               
267-408
               

               
Cow position:
               
chr4:34983444-34983307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
34, 55
               

               
Conread position:
               
267-408
               

               
Cow position:
               
chr4:37732428-37732282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
267-408
               

               
Cow position:
               
chr4:38940888-38940746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
43, 132
               

               
Conread position:
               
267-408
               

               
Cow position:
               
chr4:44024488-44024342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
36, 17
               

               
Conread position:
               
267-408
               

               
Cow position:
               
chr4:46136805-46136945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
77, 72
               

               
Conread position:
               
267-408
               

               
Cow position:
               
chr4:55694229-55694368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
35, 58
               

               
Conread position:
               
267-409
               

               
Cow position:
               
chr4:19496549-19496697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
36, 137
               

               
Conread position:
               
267-409
               

               
Cow position:
               
chr4:20027048-20026907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
34, 26
               

               
Conread position:
               
267-409
               

               
Cow position:
               
chr4:23509648-23509790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
35, 103
               

               
Conread position:
               
267-409
               

               
Cow position:
               
chr4:41370886-41370744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
28, 71
               

               
Conread position:
               
267-409
               

               
Cow position:
               
chr4:49794714-49794848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
34, 55
               

               
Conread position:
               
267-409
               

               
Cow position:
               
chr4:51728134-51728273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
34, 53
               

               
Conread position:
               
267-409
               

               
Cow position:
               
chr4:67393146-67393293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
267-411
               

               
Cow position:
               
chr4:51026405-51026549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
34, 134
               

               
Conread position:
               
267-412
               

               
Cow position:
               
chr4:561686-561830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
52, 133
               

               
Conread position:
               
267-412
               

               
Cow position:
               
chr4:17790237-17790096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
36, 57
               

               
Conread position:
               
267-412
               

               
Cow position:
               
chr4:22138166-22138015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
267-412
               

               
Cow position:
               
chr4:27657031-27657175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
34, 66
               

               
Conread position:
               
267-412
               

               
Cow position:
               
chr4:52823347-52823200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
32, 26
               

               
Conread position:
               
267-413
               

               
Cow position:
               
chr4:19102827-19102674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
267-414
               

               
Cow position:
               
chr4:20147238-20147387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
35, 132
               

               
Conread position:
               
267-414
               

               
Cow position:
               
chr4:30691058-30691203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
34, 47
               

               
Conread position:
               
267-416
               

               
Cow position:
               
chr4:51617944-51617791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
267-417
               

               
Cow position:
               
chr4:10786085-10785934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
34, 19
               

               
Conread position:
               
267-417
               

               
Cow position:
               
chr4:23846996-23846843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
126, 57
               

               
Conread position:
               
267-419
               

               
Cow position:
               
chr4:45840453-45840599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
36, 55
               

               
Conread position:
               
267-420
               

               
Cow position:
               
chr4:16239114-16238962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
16, 69
               

               
Conread position:
               
267-420
               

               
Cow position:
               
chr4:18756488-18756644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
6, 112
               

               
Conread position:
               
267-420
               

               
Cow position:
               
chr4:19199232-19199075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
36, 137
               

               
Conread position:
               
267-420
               

               
Cow position:
               
chr4:19315953-19315798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
34, 48
               

               
Conread position:
               
267-420
               

               
Cow position:
               
chr4:27276489-27276335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
36, 107
               

               
Conread position:
               
267-420
               

               
Cow position:
               
chr4:44184060-44183911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
34, 47
               

               
Conread position:
               
267-420
               

               
Cow position:
               
chr4:53347920-53347770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
26, 34
               

               
Conread position:
               
267-420
               

               
Cow position:
               
chr4:56395567-56395721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
40, 137
               

               
Conread position:
               
267-420
               

               
Cow position:
               
chr4:61999143-61998989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
267-421
               

               
Cow position:
               
chr4:4085056-4084894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
267-423
               

               
Cow position:
               
chr4:66509692-66509837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
36, 51
               

               
Conread position:
               
267-424
               

               
Cow position:
               
chr4:44681197-44681048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
267-425
               

               
Cow position:
               
chr4:12867158-12867314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
36, 52
               

               
Conread position:
               
267-425
               

               
Cow position:
               
chr4:38209920-38209763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
34, 131
               

               
Conread position:
               
267-427
               

               
Cow position:
               
chr4:59277425-59277258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
34, 137
               

               
Conread position:
               
267-434
               

               
Cow position:
               
chr4:39010104-39010274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
62, 128
               

               
Conread position:
               
267-435
               

               
Cow position:
               
chr4:30769089-30769256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
36, 56
               

               
Conread position:
               
267-435
               

               
Cow position:
               
chr4:62821001-62820834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
34, 131
               

               
Conread position:
               
267-436
               

               
Cow position:
               
chr4:44927486-44927320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
58, 40
               

               
Conread position:
               
267-438
               

               
Cow position:
               
chr4:45213132-45212961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
61, 85
               

               
Conread position:
               
267-440
               

               
Cow position:
               
chr4:22215456-22215285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
34, 65
               

               
Conread position:
               
267-442
               

               
Cow position:
               
chr4:31177879-31178053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
41, 57
               

               
Conread position:
               
267-442
               

               
Cow position:
               
chr4:40414573-40414397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
40, 53
               

               
Conread position:
               
267-443
               

               
Cow position:
               
chr4:43916343-43916524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
34, 138
               

               
Conread position:
               
267-444
               

               
Cow position:
               
chr4:8083743-8083578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
36, 58
               

               
Conread position:
               
267-452
               

               
Cow position:
               
chr4:60527235-60527421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
34, 93
               

               
Conread position:
               
267-461
               

               
Cow position:
               
chr4:60302952-60302770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
35, 53
               

               
Conread position:
               
267-467
               

               
Cow position:
               
chr4:19463599-19463804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
56, 158
               

               
Conread position:
               
267-474
               

               
Cow position:
               
chr4:12676854-12677053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
267-475
               

               
Cow position:
               
chr4:65173157-65173361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
36, 133
               

               
Conread position:
               
267-478
               

               
Cow position:
               
chr4:19420702-19420487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
34, 87
               

               
Conread position:
               
267-481
               

               
Cow position:
               
chr4:7698320-7698525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
39, 123
               

               
Conread position:
               
267-487
               

               
Cow position:
               
chr4:45801570-45801788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
61, 138
               

               
Conread position:
               
268-366
               

               
Cow position:
               
chr4:479736-479638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
100
               

               
Alignm identity:
               
84
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
33, 64
               

               
Conread position:
               
268-394
               

               
Cow position:
               
chr4:61391171-61391051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
33, 57
               

               
Conread position:
               
268-396
               

               
Cow position:
               
chr4:13508183-13508054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
268-397
               

               
Cow position:
               
chr4:656750-656622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
99, 27
               

               
Conread position:
               
268-397
               

               
Cow position:
               
chr4:3519477-3519605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
33, 56
               

               
Conread position:
               
268-397
               

               
Cow position:
               
chr4:12127583-12127453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
33, 59
               

               
Conread position:
               
268-397
               

               
Cow position:
               
chr4:17186295-17186162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
268-397
               

               
Cow position:
               
chr4:23059800-23059666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
268-397
               

               
Cow position:
               
chr4:49158739-49158606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
268-405
               

               
Cow position:
               
chr4:63198316-63198171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
268-406
               

               
Cow position:
               
chr4:58248457-58248599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
33, 134
               

               
Conread position:
               
268-408
               

               
Cow position:
               
chr4:21874231-21874374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
33, 133
               

               
Conread position:
               
268-408
               

               
Cow position:
               
chr4:62472135-62472276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
44, 83
               

               
Conread position:
               
268-409
               

               
Cow position:
               
chr4:66547712-66547567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
33, 137
               

               
Conread position:
               
268-412
               

               
Cow position:
               
chr4:28660495-28660348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
33, 137
               

               
Conread position:
               
268-412
               

               
Cow position:
               
chr4:28839673-28839810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
33, 51
               

               
Conread position:
               
268-412
               

               
Cow position:
               
chr4:42231968-42231833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
34, 65
               

               
Conread position:
               
268-420
               

               
Cow position:
               
chr4:35939678-35939529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
129, 26
               

               
Conread position:
               
268-421
               

               
Cow position:
               
chr4:43710100-43709944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
61, 14
               

               
Conread position:
               
268-427
               

               
Cow position:
               
chr4:26659356-26659512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
33, 132
               

               
Conread position:
               
268-451
               

               
Cow position:
               
chr4:46566414-46566233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
33, 105
               

               
Conread position:
               
268-465
               

               
Cow position:
               
chr4:58018401-58018595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
35, 55
               

               
Conread position:
               
269-397
               

               
Cow position:
               
chr4:3687985-3688115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
269-397
               

               
Cow position:
               
chr4:36876802-36876670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
269-407
               

               
Cow position:
               
chr4:45724925-45725060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
32, 26
               

               
Conread position:
               
270-412
               

               
Cow position:
               
chr4:51851270-51851417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
270-480
               

               
Cow position:
               
chr4:42672578-42672358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
31, 200
               

               
Conread position:
               
271-383
               

               
Cow position:
               
chr4:10732282-10732392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
114
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
30, 49
               

               
Conread position:
               
271-397
               

               
Cow position:
               
chr4:4319093-4318968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
28, 54
               

               
Conread position:
               
271-397
               

               
Cow position:
               
chr4:21161164-21161291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
271-397
               

               
Cow position:
               
chr4:37915277-37915152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
37, 53
               

               
Conread position:
               
271-397
               

               
Cow position:
               
chr4:65463450-65463327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
31, 62
               

               
Conread position:
               
271-401
               

               
Cow position:
               
chr4:4320932-4320804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
31, 62
               

               
Conread position:
               
271-412
               

               
Cow position:
               
chr4:8182578-8182432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
30, 113
               

               
Conread position:
               
271-420
               

               
Cow position:
               
chr4:85753-85904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
21, 56
               

               
Conread position:
               
271-420
               

               
Cow position:
               
chr4:66412245-66412390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
30, 41
               

               
Conread position:
               
271-426
               

               
Cow position:
               
chr4:59755585-59755439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
31, 54
               

               
Conread position:
               
271-447
               

               
Cow position:
               
chr4:59015647-59015816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
30, 39
               

               
Conread position:
               
271-452
               

               
Cow position:
               
chr4:42608797-42608976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
30, 128
               

               
Conread position:
               
271-472
               

               
Cow position:
               
chr4:57556545-57556740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
30, 54
               

               
Conread position:
               
272-408
               

               
Cow position:
               
chr4:12052272-12052141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
272-408
               

               
Cow position:
               
chr4:28854215-28854080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
29, 110
               

               
Conread position:
               
273-395
               

               
Cow position:
               
chr4:34919213-34919090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
273-396
               

               
Cow position:
               
chr4:13344599-13344721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
29, 46
               

               
Conread position:
               
273-408
               

               
Cow position:
               
chr4:42044914-42044779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
26, 113
               

               
Conread position:
               
273-408
               

               
Cow position:
               
chr4:47230937-47230796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
30, 99
               

               
Conread position:
               
273-408
               

               
Cow position:
               
chr4:47283952-47283811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
30, 99
               

               
Conread position:
               
273-408
               

               
Cow position:
               
chr4:61608904-61608772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
27, 59
               

               
Conread position:
               
273-409
               

               
Cow position:
               
chr4:14131488-14131627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
30, 59
               

               
Conread position:
               
273-412
               

               
Cow position:
               
chr4:46656190-46656334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
32, 130
               

               
Conread position:
               
273-420
               

               
Cow position:
               
chr4:32693849-32693999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
273-421
               

               
Cow position:
               
chr4:25802751-25802901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
31, 131
               

               
Conread position:
               
275-390
               

               
Cow position:
               
chr4:27511607-27511727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
121
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
276-397
               

               
Cow position:
               
chr4:3299732-3299612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
123
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
26, 48
               

               
Conread position:
               
276-398
               

               
Cow position:
               
chr4:46235101-46234975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
276-408
               

               
Cow position:
               
chr4:32458796-32458660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
28, 121
               

               
Conread position:
               
276-408
               

               
Cow position:
               
chr4:53050055-53050195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
276-410
               

               
Cow position:
               
chr4:50687802-50687662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
276-446
               

               
Cow position:
               
chr4:40995794-40995965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
27, 128
               

               
Conread position:
               
278-397
               

               
Cow position:
               
chr4:43436328-43436452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
278-445
               

               
Cow position:
               
chr4:27691608-27691432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
280-417
               

               
Cow position:
               
chr4:30647918-30648055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
27, 52
               

               
Conread position:
               
282-397
               

               
Cow position:
               
chr4:9571175-9571292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
46, 5
               

               
Conread position:
               
282-408
               

               
Cow position:
               
chr4:6202334-6202207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
284-398
               

               
Cow position:
               
chr4:67645551-67645666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
117
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
41, 99
               

               
Conread position:
               
286-414
               

               
Cow position:
               
chr4:22701736-22701606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
15, 38
               

               
Conread position:
               
286-424
               

               
Cow position:
               
chr4:49338118-49338250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
288-446
               

               
Cow position:
               
chr4:34699968-34699808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
290-412
               

               
Cow position:
               
chr4:9269822-9269698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
11, 110
               

               
Conread position:
               
301-408
               

               
Cow position:
               
chr4:33955677-33955573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
108
               

               
Alignm identity:
               
89
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
304-411
               

               
Cow position:
               
chr4:62370404-62370509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
108
               

               
Alignm identity:
               
88
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
305-420
               

               
Cow position:
               
chr4:47451568-47451689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
122
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
26, 0
               
Show alignments to all cow chromosomes.