Cow genome map

Conread name: Ss1.1-rcsk02_b7.5

Conread position: 436-656
Cow position: chr20:14607907-14607687 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 150
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 17, 53

Conread position: 462-666
Cow position: chr20:16566328-16566525 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 121
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 110, 0

Conread position: 467-672
Cow position: chr20:27407849-27407653 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 145
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 43, 20

Conread position: 472-670
Cow position: chr20:28935599-28935402 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 149
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 5, 26

Conread position: 474-656
Cow position: chr20:16548235-16548046 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 138
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 14, 23

Conread position: 475-667
Cow position: chr20:27315017-27315213 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 154
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 6, 17

Conread position: 475-672
Cow position: chr20:33435112-33434917 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 156
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 22, 78

Conread position: 477-667
Cow position: chr20:17544671-17544864 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 137
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 127, 10

Conread position: 480-606
Cow position: chr20:18392224-18392096 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 98
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 21, 0

Conread position: 480-656
Cow position: chr20:354856-354672 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 143
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 30, 11

Conread position: 480-664
Cow position: chr20:11101455-11101636 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 144
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 30, 11

Conread position: 480-666
Cow position: chr20:20926581-20926390 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 136
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 11, 47

Conread position: 480-666
Cow position: chr20:22937271-22937080 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 135
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 11, 47

Conread position: 480-667
Cow position: chr20:3599354-3599165 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 155
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 31, 11

Conread position: 480-667
Cow position: chr20:40303842-40303645 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 147
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 11, 0

Conread position: 480-672
Cow position: chr20:7442091-7441900 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 150
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 11, 16

Conread position: 480-672
Cow position: chr20:9376511-9376704 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 154
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 30, 15

Conread position: 480-672
Cow position: chr20:13876661-13876467 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 141
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 46, 12

Conread position: 480-672
Cow position: chr20:28818886-28818694 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 139
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 51, 11

Conread position: 482-606
Cow position: chr20:13943808-13943933 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 98
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 29, 9

Conread position: 482-667
Cow position: chr20:24097054-24097232 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 136
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 10, 0

Conread position: 482-667
Cow position: chr20:28605263-28605443 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 134
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 5, 0

Conread position: 482-672
Cow position: chr20:13829308-13829502 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 145
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 12, 21

Conread position: 482-672
Cow position: chr20:20124983-20124789 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 137
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 29, 56

Conread position: 483-627
Cow position: chr20:22484912-22485059 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 118
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 101, 13

Conread position: 483-661
Cow position: chr20:35192824-35192990 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 135
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 14, 5

Conread position: 484-662
Cow position: chr20:18763192-18763369 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 133
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 109, 62

Conread position: 487-613
Cow position: chr20:7622924-7622801 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 100
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 7, 0

Conread position: 487-656
Cow position: chr20:6848951-6849121 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 131
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 117, 96

Conread position: 487-670
Cow position: chr20:25009575-25009393 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 139
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 9, 0

Conread position: 487-672
Cow position: chr20:28982759-28982941 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 136
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 99, 9

Conread position: 492-659
Cow position: chr20:27323327-27323498 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 129
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 114, 0

Conread position: 492-672
Cow position: chr20:13023444-13023260 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 138
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 18, 0

Conread position: 496-660
Cow position: chr20:10188340-10188505 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 126
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 78, 44

Conread position: 496-672
Cow position: chr20:19201596-19201776 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 138
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 97, 0

Conread position: 496-672
Cow position: chr20:24883302-24883118 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 138
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 15, 0

Conread position: 497-672
Cow position: chr20:31077847-31078028 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 135
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 92, 28

Conread position: 498-659
Cow position: chr20:10956381-10956538 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 120
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 85, 0

Conread position: 498-672
Cow position: chr20:14490312-14490484 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 135
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 8, 105

Conread position: 499-672
Cow position: chr20:21325394-21325567 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 132
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 500-604
Cow position: chr20:19751376-19751480 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 90
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 500-606
Cow position: chr20:37229015-37228910 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 87
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 86, 0

Conread position: 500-607
Cow position: chr20:17846028-17846134 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 90
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 78, 0

Conread position: 500-608
Cow position: chr20:24392251-24392357 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 91
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 71, 0

Conread position: 500-632
Cow position: chr20:19060767-19060638 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 100
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 12, 0

Conread position: 500-632
Cow position: chr20:32463455-32463323 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 103
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 500-635
Cow position: chr20:13652298-13652165 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 109
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 100, 0

Conread position: 500-635
Cow position: chr20:30710566-30710429 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 107
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 83, 0

Conread position: 500-644
Cow position: chr20:2743068-2742920 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 115
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 98, 86

Conread position: 500-651
Cow position: chr20:7155250-7155398 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 116
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 24, 0

Conread position: 500-654
Cow position: chr20:15515371-15515207 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 134
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 100, 160

Conread position: 500-657
Cow position: chr20:22959278-22959117 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 121
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 93, 42

Conread position: 500-658
Cow position: chr20:9433656-9433810 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 124
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 86, 0

Conread position: 500-660
Cow position: chr20:2298717-2298565 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 121
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 52, 0

Conread position: 500-660
Cow position: chr20:34847975-34848133 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 121
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 101, 0

Conread position: 500-660
Cow position: chr20:37273067-37273223 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 124
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 81, 0

Conread position: 500-661
Cow position: chr20:4334461-4334307 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 135
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 70, 94

Conread position: 500-661
Cow position: chr20:7426128-7425967 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 126
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 500-661
Cow position: chr20:7934352-7934509 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 123
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 17, 0

Conread position: 500-661
Cow position: chr20:8547137-8547291 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 120
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 47, 18

Conread position: 500-661
Cow position: chr20:16291757-16291922 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 125
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 107, 0

Conread position: 500-661
Cow position: chr20:35445034-35444875 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 121
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 89, 142

Conread position: 500-662
Cow position: chr20:11920661-11920501 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 128
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 93, 24

Conread position: 500-663
Cow position: chr20:1824559-1824398 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 125
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 106, 0

Conread position: 500-663
Cow position: chr20:9034147-9033983 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 126
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 107, 52

Conread position: 500-663
Cow position: chr20:10200415-10200582 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 132
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 107, 0

Conread position: 500-663
Cow position: chr20:11008239-11008406 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 130
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 93, 0

Conread position: 500-663
Cow position: chr20:25162056-25161898 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 118
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 83, 0

Conread position: 500-663
Cow position: chr20:33076754-33076588 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 127
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 89, 67

Conread position: 500-663
Cow position: chr20:34097884-34097715 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 137
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 107, 0

Conread position: 500-664
Cow position: chr20:20898521-20898355 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 130
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 96, 0

Conread position: 500-664
Cow position: chr20:21372377-21372530 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 132
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 100, 0

Conread position: 500-664
Cow position: chr20:26041029-26040863 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 125
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 80, 0

Conread position: 500-667
Cow position: chr20:3148753-3148918 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 123
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 125, 0

Conread position: 500-667
Cow position: chr20:6240451-6240283 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 130
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 91, 37

Conread position: 500-667
Cow position: chr20:6603110-6603266 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 132
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 86, 0

Conread position: 500-667
Cow position: chr20:12581885-12581719 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 132
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 86, 0

Conread position: 500-667
Cow position: chr20:14806956-14807120 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 126
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 91, 0

Conread position: 500-667
Cow position: chr20:15760504-15760331 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 132
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 80, 51

Conread position: 500-667
Cow position: chr20:20459661-20459829 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 127
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 102, 44

Conread position: 500-667
Cow position: chr20:20934663-20934497 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 123
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 89, 0

Conread position: 500-667
Cow position: chr20:22922987-22923151 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 131
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 88, 0

Conread position: 500-667
Cow position: chr20:31468592-31468419 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 130
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 91, 12

Conread position: 500-667
Cow position: chr20:37919301-37919139 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 122
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 72, 0

Conread position: 500-668
Cow position: chr20:9267035-9266863 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 138
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 84, 37

Conread position: 500-668
Cow position: chr20:13617295-13617449 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 133
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 86, 0

Conread position: 500-668
Cow position: chr20:14879858-14880024 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 132
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 106, 0

Conread position: 500-669
Cow position: chr20:10245984-10245813 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 127
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 144, 102

Conread position: 500-670
Cow position: chr20:7438782-7438617 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 123
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 86, 0

Conread position: 500-670
Cow position: chr20:8578318-8578495 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 128
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 85, 0

Conread position: 500-670
Cow position: chr20:11751723-11751894 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 124
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 84, 15

Conread position: 500-670
Cow position: chr20:36312439-36312271 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 127
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 138, 107

Conread position: 500-671
Cow position: chr20:3255105-3255275 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 130
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 61, 107

Conread position: 500-671
Cow position: chr20:5703540-5703713 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 138
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 38, 148

Conread position: 500-671
Cow position: chr20:19636107-19635937 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 127
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 138, 102

Conread position: 500-671
Cow position: chr20:20158205-20158372 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 130
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 94, 0

Conread position: 500-671
Cow position: chr20:21345502-21345680 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 138
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 108, 0

Conread position: 500-671
Cow position: chr20:28594355-28594537 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 141
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 25, 17

Conread position: 500-671
Cow position: chr20:29990378-29990205 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 129
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 107, 25

Conread position: 500-672
Cow position: chr20:398237-398070 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 129
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 77, 0

Conread position: 500-672
Cow position: chr20:3035402-3035581 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 129
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 84, 0

Conread position: 500-672
Cow position: chr20:3141643-3141817 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 134
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 107, 81

Conread position: 500-672
Cow position: chr20:4892050-4891876 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 136
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 105, 0

Conread position: 500-672
Cow position: chr20:5950574-5950398 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 133
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 82, 0

Conread position: 500-672
Cow position: chr20:6054440-6054265 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 134
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 104, 131

Conread position: 500-672
Cow position: chr20:7738162-7737992 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 131
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 106, 0

Conread position: 500-672
Cow position: chr20:8021195-8021379 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 139
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 103, 0

Conread position: 500-672
Cow position: chr20:8556200-8556028 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 126
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 500-672
Cow position: chr20:8679593-8679418 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 128
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 107, 10

Conread position: 500-672
Cow position: chr20:11359563-11359397 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 132
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 86, 0

Conread position: 500-672
Cow position: chr20:12420549-12420377 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 129
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 88, 37

Conread position: 500-672
Cow position: chr20:13068083-13067906 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 127
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 13, 0

Conread position: 500-672
Cow position: chr20:14620234-14620064 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 136
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 46, 84

Conread position: 500-672
Cow position: chr20:14755771-14755601 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 130
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 106, 0

Conread position: 500-672
Cow position: chr20:14980440-14980265 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 138
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 23, 76

Conread position: 500-672
Cow position: chr20:15529930-15530102 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 133
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 106, 18

Conread position: 500-672
Cow position: chr20:16941219-16941040 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 135
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 106, 0

Conread position: 500-672
Cow position: chr20:16977775-16977595 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 136
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 83, 0

Conread position: 500-672
Cow position: chr20:17251786-17251961 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 138
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 102, 0

Conread position: 500-672
Cow position: chr20:18379448-18379619 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 125
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 39, 0

Conread position: 500-672
Cow position: chr20:19834761-19834589 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 133
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 84, 118

Conread position: 500-672
Cow position: chr20:20099531-20099360 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 133
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 84, 137

Conread position: 500-672
Cow position: chr20:20967390-20967561 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 135
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 133, 107

Conread position: 500-672
Cow position: chr20:20984061-20984239 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 137
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 85, 0

Conread position: 500-672
Cow position: chr20:21291729-21291911 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 136
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 89, 0

Conread position: 500-672
Cow position: chr20:21428231-21428400 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 132
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 61, 0

Conread position: 500-672
Cow position: chr20:22851547-22851718 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 129
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 103, 40

Conread position: 500-672
Cow position: chr20:23846596-23846423 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 132
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 26, 0

Conread position: 500-672
Cow position: chr20:25021497-25021673 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 130
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 77, 37

Conread position: 500-672
Cow position: chr20:25464976-25464804 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 127
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 500-672
Cow position: chr20:26996599-26996776 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 128
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 79, 55

Conread position: 500-672
Cow position: chr20:28249249-28249425 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 128
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 91, 0

Conread position: 500-672
Cow position: chr20:29845120-29845297 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 141
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 95, 69

Conread position: 500-672
Cow position: chr20:32636258-32636091 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 128
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 9, 0

Conread position: 500-672
Cow position: chr20:32709376-32709198 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 128
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 105, 0

Conread position: 500-672
Cow position: chr20:33067291-33067117 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 133
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 76, 70

Conread position: 500-672
Cow position: chr20:34083784-34083963 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 128
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 84, 69

Conread position: 500-672
Cow position: chr20:35146090-35146256 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 123
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 83, 0

Conread position: 500-672
Cow position: chr20:35310396-35310572 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 129
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 20, 10

Conread position: 500-672
Cow position: chr20:35442213-35442039 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 133
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 109, 0

Conread position: 500-672
Cow position: chr20:38089982-38090158 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 127
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 91, 0

Conread position: 500-672
Cow position: chr20:38872932-38872757 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 125
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 106, 67

Conread position: 500-672
Cow position: chr20:38934986-38934824 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 129
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 86, 0

Conread position: 500-672
Cow position: chr20:39417834-39417661 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 128
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 90, 158

Conread position: 501-594
Cow position: chr20:6096425-6096332 (view UCSC Genome Browser custom track)
Alignm length: 94
Alignm identity: 79
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 501-606
Cow position: chr20:23678647-23678540 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 87
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 24, 0

Conread position: 501-628
Cow position: chr20:40157970-40158096 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 98
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 121, 0

Conread position: 501-650
Cow position: chr20:2822940-2823099 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 121
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 101, 0

Conread position: 501-658
Cow position: chr20:20590231-20590076 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 125
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 101, 0

Conread position: 501-672
Cow position: chr20:297937-297762 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 129
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 88, 12

Conread position: 501-672
Cow position: chr20:2316355-2316185 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 137
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 124, 101

Conread position: 501-672
Cow position: chr20:4755763-4755592 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 126
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 501-672
Cow position: chr20:36806591-36806759 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 125
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 86, 149

Conread position: 501-672
Cow position: chr20:37357926-37358101 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 134
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 105, 0

Conread position: 502-598
Cow position: chr20:580849-580753 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 80
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 502-643
Cow position: chr20:32555361-32555496 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 116
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 84, 0

Conread position: 502-660
Cow position: chr20:31845214-31845058 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 119
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 100, 0

Conread position: 502-662
Cow position: chr20:24711912-24712072 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 122
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 102, 136

Conread position: 502-664
Cow position: chr20:19746042-19746206 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 131
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 124, 0

Conread position: 502-667
Cow position: chr20:5078343-5078514 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 134
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 89, 129

Conread position: 502-670
Cow position: chr20:5078698-5078876 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 132
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 98, 0

Conread position: 502-671
Cow position: chr20:1139696-1139524 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 123
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 92, 23

Conread position: 502-671
Cow position: chr20:14759594-14759433 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 130
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 82, 0

Conread position: 502-672
Cow position: chr20:382060-381892 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 127
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 13, 0

Conread position: 502-672
Cow position: chr20:1640382-1640225 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 127
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 35, 0

Conread position: 502-672
Cow position: chr20:5009803-5009974 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 128
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 80, 35

Conread position: 502-672
Cow position: chr20:5978775-5978601 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 127
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 58, 127

Conread position: 502-672
Cow position: chr20:7417096-7416918 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 133
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 99, 0

Conread position: 502-672
Cow position: chr20:9730068-9730246 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 127
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 40, 0

Conread position: 502-672
Cow position: chr20:10208880-10209049 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 133
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 53, 0

Conread position: 502-672
Cow position: chr20:14282991-14283165 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 134
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 91, 0

Conread position: 502-672
Cow position: chr20:21018495-21018664 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 122
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 92, 67

Conread position: 502-672
Cow position: chr20:21721281-21721462 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 141
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 97, 146

Conread position: 502-672
Cow position: chr20:21941505-21941668 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 130
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 82, 0

Conread position: 502-672
Cow position: chr20:23936113-23935936 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 132
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 94, 38

Conread position: 502-672
Cow position: chr20:34202706-34202884 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 135
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 92, 0

Conread position: 502-672
Cow position: chr20:34221550-34221724 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 134
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 96, 65

Conread position: 502-672
Cow position: chr20:35589613-35589441 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 121
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 79, 0

Conread position: 502-672
Cow position: chr20:36779658-36779477 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 137
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 87, 0

Conread position: 502-672
Cow position: chr20:39016801-39016627 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 129
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 102, 0

Conread position: 503-646
Cow position: chr20:25474625-25474772 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 112
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 95, 67

Conread position: 503-653
Cow position: chr20:31746564-31746413 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 110
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 86, 0

Conread position: 503-659
Cow position: chr20:5702796-5702951 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 120
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 115, 97

Conread position: 503-664
Cow position: chr20:24314961-24314803 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 117
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 40, 0

Conread position: 503-664
Cow position: chr20:39269013-39268848 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 120
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 85, 0

Conread position: 503-671
Cow position: chr20:26387533-26387697 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 125
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 133, 0

Conread position: 503-672
Cow position: chr20:4945179-4945008 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 139
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 93, 18

Conread position: 503-672
Cow position: chr20:17606895-17606722 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 122
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 104, 0

Conread position: 503-672
Cow position: chr20:22065138-22065303 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 124
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 78, 0

Conread position: 503-672
Cow position: chr20:32847417-32847584 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 128
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 103, 0

Conread position: 503-672
Cow position: chr20:33623480-33623317 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 128
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 135, 46

Conread position: 503-672
Cow position: chr20:39398553-39398724 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 121
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 90, 0

Conread position: 504-635
Cow position: chr20:23633540-23633407 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 104
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 104, 0

Conread position: 504-659
Cow position: chr20:18487997-18488156 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 118
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 100, 0

Conread position: 504-662
Cow position: chr20:5364999-5365160 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 129
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 102, 151

Conread position: 504-663
Cow position: chr20:30744648-30744488 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 119
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 86, 138

Conread position: 504-663
Cow position: chr20:33359400-33359236 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 120
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 86, 125

Conread position: 504-664
Cow position: chr20:12334408-12334565 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 124
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 104, 0

Conread position: 504-667
Cow position: chr20:11499081-11499240 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 132
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 68, 0

Conread position: 504-672
Cow position: chr20:2819616-2819790 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 124
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 79, 0

Conread position: 504-672
Cow position: chr20:12126231-12126059 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 143
Alignm E-value: 8.00001e-42
Alignm gaps (pig, cow): 90, 0

Conread position: 505-671
Cow position: chr20:4789777-4789620 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 122
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 39, 0

Conread position: 505-672
Cow position: chr20:6473807-6473977 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 125
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 102, 71

Conread position: 506-603
Cow position: chr20:27325013-27325108 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 83
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 74, 0

Conread position: 506-635
Cow position: chr20:20720976-20720853 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 101
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 80, 0

Conread position: 506-635
Cow position: chr20:34467876-34467747 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 100
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 506-660
Cow position: chr20:14433346-14433190 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 122
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 101, 61

Conread position: 506-664
Cow position: chr20:21210108-21210262 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 119
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 82, 58

Conread position: 506-672
Cow position: chr20:15766186-15766358 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 128
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 73, 0

Conread position: 506-672
Cow position: chr20:34881323-34881161 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 127
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 15, 138

Conread position: 506-672
Cow position: chr20:42309889-42309725 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 125
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 102, 43

Conread position: 507-644
Cow position: chr20:27340391-27340535 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 111
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 90, 138

Conread position: 508-667
Cow position: chr20:23880030-23879869 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 125
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 32, 24

Conread position: 512-667
Cow position: chr20:26090874-26090725 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 126
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 55, 0

Conread position: 512-672
Cow position: chr20:37609703-37609865 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 121
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 87, 19

Conread position: 513-633
Cow position: chr20:9100361-9100480 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 99
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 76, 0

Conread position: 513-634
Cow position: chr20:11822560-11822682 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 103
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 91, 64

Conread position: 513-649
Cow position: chr20:18831796-18831661 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 107
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 99, 78

Conread position: 513-655
Cow position: chr20:40423021-40422873 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 112
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 67, 0

Conread position: 513-672
Cow position: chr20:5814648-5814812 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 122
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 88, 0

Conread position: 513-672
Cow position: chr20:11548642-11548486 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 122
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 70, 0

Conread position: 513-672
Cow position: chr20:20202301-20202462 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 118
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 80, 0

Conread position: 513-672
Cow position: chr20:41089714-41089550 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 120
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 13, 0

Conread position: 514-663
Cow position: chr20:33780952-33781103 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 119
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 108, 72

Conread position: 517-672
Cow position: chr20:5644874-5645018 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 118
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 20, 0

Conread position: 517-672
Cow position: chr20:11135668-11135510 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 126
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 23, 0

Conread position: 518-663
Cow position: chr20:18500614-18500763 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 116
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 86, 0

Conread position: 518-670
Cow position: chr20:23506022-23506177 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 122
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 71, 0

Conread position: 520-663
Cow position: chr20:17733470-17733323 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 113
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 71, 0

Conread position: 520-672
Cow position: chr20:21279475-21279623 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 119
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 81, 0

Conread position: 520-672
Cow position: chr20:21344556-21344712 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 116
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 87, 0

Conread position: 520-672
Cow position: chr20:23358405-23358252 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 119
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 80, 9

Conread position: 520-672
Cow position: chr20:34271416-34271572 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 123
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 60, 47

Conread position: 520-672
Cow position: chr20:41313476-41313622 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 117
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 33, 0

Conread position: 523-672
Cow position: chr20:38701031-38700886 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 111
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 60, 0

Conread position: 524-664
Cow position: chr20:35605300-35605437 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 118
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 77, 0

Conread position: 524-672
Cow position: chr20:11661230-11661086 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 113
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 82, 0

Conread position: 524-672
Cow position: chr20:13805415-13805558 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 110
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 5, 0

Conread position: 525-642
Cow position: chr20:12033528-12033411 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 92
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 525-660
Cow position: chr20:18423774-18423905 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 106
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 81, 0

Conread position: 525-664
Cow position: chr20:24657287-24657424 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 106
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 58, 0

Conread position: 525-672
Cow position: chr20:3564250-3564395 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 111
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 77, 0

Conread position: 525-672
Cow position: chr20:5172706-5172851 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 108
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 82, 0

Conread position: 525-672
Cow position: chr20:36741557-36741704 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 125
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 79, 128

Conread position: 525-672
Cow position: chr20:38061672-38061531 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 117
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 76, 0

Conread position: 526-672
Cow position: chr20:9379585-9379725 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 111
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 60, 0

Conread position: 527-671
Cow position: chr20:17524368-17524516 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 114
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 80, 0

Conread position: 527-672
Cow position: chr20:26424502-26424650 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 112
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 80, 68

Conread position: 528-671
Cow position: chr20:41473646-41473509 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 110
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 74, 0

Conread position: 528-672
Cow position: chr20:21169665-21169527 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 113
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 58, 0

Conread position: 528-672
Cow position: chr20:42897880-42897730 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 118
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 68, 0

Conread position: 529-663
Cow position: chr20:32067395-32067256 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 108
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 44, 0

Conread position: 530-672
Cow position: chr20:7926935-7927076 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 108
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 121, 72

Conread position: 530-672
Cow position: chr20:14460480-14460626 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 110
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 72, 0

Conread position: 531-660
Cow position: chr20:10469142-10469275 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 102
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 76, 0

Conread position: 531-664
Cow position: chr20:13269715-13269848 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 101
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 50, 56

Conread position: 531-664
Cow position: chr20:32174606-32174729 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 105
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 52, 0

Conread position: 531-672
Cow position: chr20:8821638-8821500 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 107
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 110, 0

Conread position: 531-672
Cow position: chr20:29754876-29755020 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 115
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 62, 38

Conread position: 531-672
Cow position: chr20:40578567-40578432 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 113
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 22, 0

Conread position: 532-672
Cow position: chr20:11368261-11368121 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 108
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 134, 56

Conread position: 545-672
Cow position: chr20:13795231-13795354 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 103
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 45, 0

Conread position: 553-667
Cow position: chr20:19899431-19899541 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 96
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 33, 0

Conread position: 554-672
Cow position: chr20:19623121-19623004 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 95
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 26, 53

Conread position: 555-662
Cow position: chr20:26055103-26054992 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 93
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 47, 0

Conread position: 555-672
Cow position: chr20:5024839-5024724 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 94
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 51, 0

Conread position: 557-672
Cow position: chr20:20892552-20892433 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 95
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 48, 0

Conread position: 558-672
Cow position: chr20:7659102-7658983 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 99
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 34, 0

Conread position: 559-664
Cow position: chr20:1999513-1999618 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 86
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 562-667
Cow position: chr20:6048435-6048327 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 90
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 35, 24

Conread position: 568-672
Cow position: chr20:6890883-6890985 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 86
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 15, 0

Conread position: 572-672
Cow position: chr20:22235441-22235541 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 83
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.