Cow genome map

Conread name: Ss1.1-rcsk02_b7.5

Conread position: 451-663
Cow position: chr28:4870821-4870601 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 158
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 22, 35

Conread position: 454-672
Cow position: chr28:18762017-18761804 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 156
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 151, 33

Conread position: 466-640
Cow position: chr28:4022670-4022848 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 132
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 31, 22

Conread position: 466-667
Cow position: chr28:20968583-20968377 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 149
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 22, 31

Conread position: 468-672
Cow position: chr28:7964681-7964474 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 154
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 18, 31

Conread position: 469-672
Cow position: chr28:20281758-20281952 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 153
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 28, 18

Conread position: 474-635
Cow position: chr28:22362258-22362419 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 120
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 36, 18

Conread position: 475-655
Cow position: chr28:16450524-16450345 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 135
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 20, 63

Conread position: 476-670
Cow position: chr28:19994947-19994744 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 149
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 15, 0

Conread position: 479-672
Cow position: chr28:17949102-17948913 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 150
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 148, 17

Conread position: 480-635
Cow position: chr28:31649089-31649239 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 119
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 29, 15

Conread position: 480-637
Cow position: chr28:19295126-19294964 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 121
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 33, 11

Conread position: 480-656
Cow position: chr28:5711999-5711823 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 132
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 11, 31

Conread position: 480-660
Cow position: chr28:21363750-21363932 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 136
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 30, 11

Conread position: 480-664
Cow position: chr28:17728096-17727916 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 152
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 30, 11

Conread position: 480-667
Cow position: chr28:5931359-5931543 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 144
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 33, 11

Conread position: 480-667
Cow position: chr28:12951425-12951615 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 145
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 34, 11

Conread position: 480-668
Cow position: chr28:7267940-7267749 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 151
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 31, 15

Conread position: 480-672
Cow position: chr28:4163576-4163376 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 155
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 11, 0

Conread position: 480-672
Cow position: chr28:10863781-10863596 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 135
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 117, 0

Conread position: 480-672
Cow position: chr28:11987177-11987367 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 148
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 28, 11

Conread position: 480-672
Cow position: chr28:12055415-12055605 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 148
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 28, 11

Conread position: 480-672
Cow position: chr28:13371136-13370935 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 148
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 17, 11

Conread position: 481-658
Cow position: chr28:555515-555686 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 131
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 16, 105

Conread position: 481-672
Cow position: chr28:30922049-30921853 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 139
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 10, 21

Conread position: 483-670
Cow position: chr28:8716373-8716178 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 144
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 111, 13

Conread position: 483-672
Cow position: chr28:5144509-5144310 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 152
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 6, 0

Conread position: 483-672
Cow position: chr28:5199839-5200031 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 138
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 110, 14

Conread position: 486-670
Cow position: chr28:7413675-7413865 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 133
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 11, 0

Conread position: 486-672
Cow position: chr28:1655078-1654886 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 139
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 11, 0

Conread position: 487-660
Cow position: chr28:16346512-16346346 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 130
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 9, 0

Conread position: 487-670
Cow position: chr28:3023894-3023714 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 132
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 146, 9

Conread position: 487-672
Cow position: chr28:5138972-5138795 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 136
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 10, 0

Conread position: 487-672
Cow position: chr28:8787559-8787743 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 138
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 97, 9

Conread position: 487-672
Cow position: chr28:21868476-21868661 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 140
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 102, 10

Conread position: 487-672
Cow position: chr28:23460156-23460348 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 138
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 24, 51

Conread position: 487-672
Cow position: chr28:29416697-29416521 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 138
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 9, 0

Conread position: 488-670
Cow position: chr28:8516165-8515988 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 132
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 19, 99

Conread position: 488-672
Cow position: chr28:10480793-10480599 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 142
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 9, 0

Conread position: 490-656
Cow position: chr28:18369995-18369825 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 129
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 19, 27

Conread position: 490-672
Cow position: chr28:8827179-8827368 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 133
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 13, 0

Conread position: 490-672
Cow position: chr28:30746708-30746534 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 142
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 71, 6

Conread position: 491-663
Cow position: chr28:25399895-25400062 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 129
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 99, 5

Conread position: 492-649
Cow position: chr28:4138647-4138486 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 120
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 95, 9

Conread position: 495-661
Cow position: chr28:5231964-5232133 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 132
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 112, 72

Conread position: 495-672
Cow position: chr28:10762921-10763092 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 131
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 11, 0

Conread position: 496-660
Cow position: chr28:16879600-16879760 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 128
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 90, 0

Conread position: 496-668
Cow position: chr28:6975268-6975433 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 131
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 95, 0

Conread position: 496-671
Cow position: chr28:7808667-7808833 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 129
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 21, 0

Conread position: 496-671
Cow position: chr28:8898071-8898257 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 136
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 111, 73

Conread position: 496-672
Cow position: chr28:8936177-8936352 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 133
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 76, 0

Conread position: 499-671
Cow position: chr28:11305602-11305432 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 128
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 5, 0

Conread position: 500-603
Cow position: chr28:4355578-4355680 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 86
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 62, 0

Conread position: 500-606
Cow position: chr28:12385262-12385157 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 88
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 86, 0

Conread position: 500-613
Cow position: chr28:8149601-8149484 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 95
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 93, 0

Conread position: 500-613
Cow position: chr28:32174660-32174775 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 96
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 99, 0

Conread position: 500-633
Cow position: chr28:5867752-5867889 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 104
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 91, 0

Conread position: 500-642
Cow position: chr28:11559601-11559459 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 110
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 105, 123

Conread position: 500-656
Cow position: chr28:10855687-10855533 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 112
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 102, 0

Conread position: 500-659
Cow position: chr28:26743657-26743822 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 135
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 101, 0

Conread position: 500-660
Cow position: chr28:18608337-18608173 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 120
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 107, 0

Conread position: 500-660
Cow position: chr28:19118000-19118164 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 121
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 80, 0

Conread position: 500-660
Cow position: chr28:26269417-26269591 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 130
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 93, 0

Conread position: 500-660
Cow position: chr28:26531246-26531089 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 119
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 97, 63

Conread position: 500-662
Cow position: chr28:117732-117564 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 128
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 58, 0

Conread position: 500-662
Cow position: chr28:118640-118808 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 128
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 58, 0

Conread position: 500-662
Cow position: chr28:12933699-12933542 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 123
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 91, 0

Conread position: 500-662
Cow position: chr28:12973912-12974078 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 128
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 75, 67

Conread position: 500-664
Cow position: chr28:3143844-3143689 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 131
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 10, 0

Conread position: 500-664
Cow position: chr28:4834813-4834647 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 122
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 84, 56

Conread position: 500-664
Cow position: chr28:11527227-11527063 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 120
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 88, 21

Conread position: 500-664
Cow position: chr28:11827719-11827884 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 128
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 89, 12

Conread position: 500-664
Cow position: chr28:12672434-12672265 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 121
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 60, 0

Conread position: 500-664
Cow position: chr28:16214842-16214689 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 124
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 66, 0

Conread position: 500-664
Cow position: chr28:16919137-16918978 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 124
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 22, 0

Conread position: 500-667
Cow position: chr28:3137574-3137752 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 129
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 68, 0

Conread position: 500-667
Cow position: chr28:5673906-5674071 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 136
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 77, 67

Conread position: 500-667
Cow position: chr28:10890704-10890543 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 131
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 97, 0

Conread position: 500-667
Cow position: chr28:19038988-19038819 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 131
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 95, 0

Conread position: 500-667
Cow position: chr28:19216853-19217011 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 137
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 13, 0

Conread position: 500-667
Cow position: chr28:19564197-19564036 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 131
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 77, 0

Conread position: 500-667
Cow position: chr28:24082301-24082469 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 127
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 84, 0

Conread position: 500-667
Cow position: chr28:34081833-34081672 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 127
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 92, 52

Conread position: 500-669
Cow position: chr28:7644771-7644945 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 134
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 33, 51

Conread position: 500-669
Cow position: chr28:26982707-26982535 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 130
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 104, 0

Conread position: 500-670
Cow position: chr28:751258-751430 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 126
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 107, 44

Conread position: 500-670
Cow position: chr28:10203150-10203314 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 124
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 56, 0

Conread position: 500-670
Cow position: chr28:18797351-18797512 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 131
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 46, 0

Conread position: 500-670
Cow position: chr28:33032519-33032680 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 123
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 50, 0

Conread position: 500-671
Cow position: chr28:3746233-3746400 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 127
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 99, 0

Conread position: 500-671
Cow position: chr28:4185937-4186106 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 129
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 104, 0

Conread position: 500-671
Cow position: chr28:9109247-9109414 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 131
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 69, 0

Conread position: 500-671
Cow position: chr28:23007699-23007539 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 128
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 92, 0

Conread position: 500-672
Cow position: chr28:2077531-2077705 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 125
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 93, 0

Conread position: 500-672
Cow position: chr28:2151409-2151236 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 132
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 88, 147

Conread position: 500-672
Cow position: chr28:2825450-2825625 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 134
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 89, 83

Conread position: 500-672
Cow position: chr28:2892283-2892460 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 132
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 89, 0

Conread position: 500-672
Cow position: chr28:3011238-3011063 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 137
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 44, 20

Conread position: 500-672
Cow position: chr28:3410956-3410785 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 131
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 42, 86

Conread position: 500-672
Cow position: chr28:3423808-3423981 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 128
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 89, 0

Conread position: 500-672
Cow position: chr28:3484611-3484790 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 131
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 67, 0

Conread position: 500-672
Cow position: chr28:3678393-3678563 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 133
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 89, 0

Conread position: 500-672
Cow position: chr28:3726178-3726004 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 140
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 91, 0

Conread position: 500-672
Cow position: chr28:3740907-3741073 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 127
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 162, 101

Conread position: 500-672
Cow position: chr28:4013115-4013287 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 136
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 0, 0

Conread position: 500-672
Cow position: chr28:4071000-4071162 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 128
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 44, 0

Conread position: 500-672
Cow position: chr28:4158986-4159168 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 135
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 105, 0

Conread position: 500-672
Cow position: chr28:4643739-4643566 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 125
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 113, 0

Conread position: 500-672
Cow position: chr28:4881209-4881045 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 136
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 102, 0

Conread position: 500-672
Cow position: chr28:5204226-5204389 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 131
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 116, 0

Conread position: 500-672
Cow position: chr28:5235912-5236078 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 139
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 89, 63

Conread position: 500-672
Cow position: chr28:5236573-5236391 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 142
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 91, 0

Conread position: 500-672
Cow position: chr28:5552684-5552503 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 138
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 82, 0

Conread position: 500-672
Cow position: chr28:5577560-5577736 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 132
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 86, 125

Conread position: 500-672
Cow position: chr28:5609886-5609714 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 131
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 73, 67

Conread position: 500-672
Cow position: chr28:5630129-5630303 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 136
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 107, 45

Conread position: 500-672
Cow position: chr28:6321848-6322023 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 130
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 107, 53

Conread position: 500-672
Cow position: chr28:6935148-6934972 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 123
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 106, 0

Conread position: 500-672
Cow position: chr28:7350685-7350854 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 137
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 141, 0

Conread position: 500-672
Cow position: chr28:7557703-7557523 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 135
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 83, 0

Conread position: 500-672
Cow position: chr28:7619119-7618956 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 128
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 91, 0

Conread position: 500-672
Cow position: chr28:8140513-8140688 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 127
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 116, 140

Conread position: 500-672
Cow position: chr28:8291458-8291617 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 129
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 58, 0

Conread position: 500-672
Cow position: chr28:8396366-8396529 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 130
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 91, 0

Conread position: 500-672
Cow position: chr28:9426319-9426148 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 129
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 103, 0

Conread position: 500-672
Cow position: chr28:9636426-9636253 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 130
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 138, 0

Conread position: 500-672
Cow position: chr28:9705684-9705860 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 139
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 95, 12

Conread position: 500-672
Cow position: chr28:10053294-10053128 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 130
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 93, 0

Conread position: 500-672
Cow position: chr28:10196834-10196666 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 125
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 86, 0

Conread position: 500-672
Cow position: chr28:10615915-10615746 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 134
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 143, 0

Conread position: 500-672
Cow position: chr28:10958833-10959003 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 132
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 104, 0

Conread position: 500-672
Cow position: chr28:11016438-11016608 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 131
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 27, 53

Conread position: 500-672
Cow position: chr28:11346456-11346285 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 133
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 83, 103

Conread position: 500-672
Cow position: chr28:11398766-11398590 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 138
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 107, 0

Conread position: 500-672
Cow position: chr28:11411503-11411335 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 133
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 90, 0

Conread position: 500-672
Cow position: chr28:11422782-11422615 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 130
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 84, 12

Conread position: 500-672
Cow position: chr28:11426510-11426344 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 128
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 77, 0

Conread position: 500-672
Cow position: chr28:11562215-11562039 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 130
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 106, 0

Conread position: 500-672
Cow position: chr28:11743789-11743624 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 135
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 105, 23

Conread position: 500-672
Cow position: chr28:11866634-11866464 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 133
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 107, 0

Conread position: 500-672
Cow position: chr28:12598370-12598540 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 120
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 101, 0

Conread position: 500-672
Cow position: chr28:12991173-12991339 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 122
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 91, 0

Conread position: 500-672
Cow position: chr28:13048253-13048076 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 133
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 98, 0

Conread position: 500-672
Cow position: chr28:13356341-13356162 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 134
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 26, 0

Conread position: 500-672
Cow position: chr28:13527225-13527402 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 137
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 60, 149

Conread position: 500-672
Cow position: chr28:14998098-14998269 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 127
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 164, 72

Conread position: 500-672
Cow position: chr28:15362610-15362782 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 136
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 78, 105

Conread position: 500-672
Cow position: chr28:17943761-17943928 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 125
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 101, 0

Conread position: 500-672
Cow position: chr28:20759670-20759489 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 139
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 94, 40

Conread position: 500-672
Cow position: chr28:21008634-21008467 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 142
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 25, 0

Conread position: 500-672
Cow position: chr28:21744746-21744916 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 133
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 106, 0

Conread position: 500-672
Cow position: chr28:21844988-21845155 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 133
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 106, 0

Conread position: 500-672
Cow position: chr28:22085511-22085341 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 131
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 106, 0

Conread position: 500-672
Cow position: chr28:23296353-23296523 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 131
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 102, 0

Conread position: 500-672
Cow position: chr28:24966417-24966590 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 126
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 62, 0

Conread position: 500-672
Cow position: chr28:26530835-26530664 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 133
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 163, 0

Conread position: 500-672
Cow position: chr28:26719374-26719534 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 137
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 86, 0

Conread position: 500-672
Cow position: chr28:26820248-26820072 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 129
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 107, 44

Conread position: 500-672
Cow position: chr28:26826250-26826426 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 129
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 105, 0

Conread position: 500-672
Cow position: chr28:27218354-27218529 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 126
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 83, 31

Conread position: 500-672
Cow position: chr28:27445542-27445371 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 126
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 73, 107

Conread position: 500-672
Cow position: chr28:30902157-30902325 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 137
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 91, 0

Conread position: 500-672
Cow position: chr28:32014815-32014989 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 131
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 107, 0

Conread position: 500-672
Cow position: chr28:33884433-33884606 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 123
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 119, 46

Conread position: 500-672
Cow position: chr28:34230259-34230435 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 131
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 91, 0

Conread position: 500-672
Cow position: chr28:34843541-34843368 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 128
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 93, 12

Conread position: 501-667
Cow position: chr28:26960877-26960714 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 133
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 76, 0

Conread position: 501-672
Cow position: chr28:24698722-24698897 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 126
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 79, 66

Conread position: 501-672
Cow position: chr28:34830183-34830358 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 132
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 13, 69

Conread position: 502-605
Cow position: chr28:27161293-27161191 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 88
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 35, 0

Conread position: 502-615
Cow position: chr28:8258857-8258970 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 93
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 502-632
Cow position: chr28:8167321-8167190 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 105
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 102, 129

Conread position: 502-635
Cow position: chr28:13448156-13448291 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 102
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 82, 0

Conread position: 502-643
Cow position: chr28:2899022-2899173 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 116
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 98, 0

Conread position: 502-656
Cow position: chr28:20397337-20397178 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 124
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 89, 0

Conread position: 502-659
Cow position: chr28:3729986-3729829 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 125
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 89, 140

Conread position: 502-661
Cow position: chr28:4045880-4046037 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 125
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 109, 10

Conread position: 502-663
Cow position: chr28:4307864-4307698 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 122
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 87, 0

Conread position: 502-663
Cow position: chr28:17680655-17680820 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 129
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 81, 0

Conread position: 502-663
Cow position: chr28:22132944-22133103 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 120
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 75, 19

Conread position: 502-667
Cow position: chr28:8259661-8259831 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 123
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 87, 0

Conread position: 502-671
Cow position: chr28:4074002-4074180 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 130
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 93, 0

Conread position: 502-672
Cow position: chr28:662139-662304 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 129
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 56, 93

Conread position: 502-672
Cow position: chr28:777708-777880 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 132
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 56, 0

Conread position: 502-672
Cow position: chr28:2777563-2777734 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 125
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 79, 0

Conread position: 502-672
Cow position: chr28:4006817-4006985 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 126
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 50, 60

Conread position: 502-672
Cow position: chr28:4027429-4027265 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 125
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 16, 0

Conread position: 502-672
Cow position: chr28:5441864-5441693 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 138
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 121, 24

Conread position: 502-672
Cow position: chr28:7008945-7008777 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 130
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 99, 0

Conread position: 502-672
Cow position: chr28:8347764-8347938 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 133
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 92, 0

Conread position: 502-672
Cow position: chr28:10977874-10978042 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 128
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 26, 68

Conread position: 502-672
Cow position: chr28:11059533-11059695 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 132
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 54, 0

Conread position: 502-672
Cow position: chr28:20046586-20046746 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 127
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 22, 0

Conread position: 502-672
Cow position: chr28:20173872-20174042 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 128
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 76, 51

Conread position: 502-672
Cow position: chr28:23724429-23724265 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 130
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 22, 82

Conread position: 502-672
Cow position: chr28:24996580-24996414 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 132
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 134, 70

Conread position: 502-672
Cow position: chr28:28765870-28765699 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 127
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 104, 145

Conread position: 502-672
Cow position: chr28:29989077-29988904 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 129
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 103, 75

Conread position: 503-659
Cow position: chr28:4227510-4227667 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 122
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 86, 17

Conread position: 503-664
Cow position: chr28:4182035-4182197 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 123
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 78, 114

Conread position: 503-667
Cow position: chr28:13474334-13474498 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 131
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 122, 80

Conread position: 503-670
Cow position: chr28:24646625-24646785 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 124
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 103, 0

Conread position: 503-670
Cow position: chr28:24672299-24672470 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 125
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 77, 64

Conread position: 503-672
Cow position: chr28:3492750-3492583 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 128
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 88, 0

Conread position: 503-672
Cow position: chr28:4876477-4876642 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 128
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 18, 0

Conread position: 503-672
Cow position: chr28:5254908-5255075 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 131
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 99, 0

Conread position: 503-672
Cow position: chr28:5684737-5684904 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 121
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 66, 0

Conread position: 503-672
Cow position: chr28:6358380-6358206 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 128
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 86, 0

Conread position: 503-672
Cow position: chr28:16370049-16369885 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 123
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 124, 0

Conread position: 503-672
Cow position: chr28:17739856-17740029 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 136
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 104, 0

Conread position: 504-661
Cow position: chr28:19128134-19127979 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 120
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 103, 27

Conread position: 504-663
Cow position: chr28:7697947-7697784 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 125
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 102, 0

Conread position: 504-663
Cow position: chr28:16857072-16856911 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 122
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 88, 0

Conread position: 504-667
Cow position: chr28:13269762-13269917 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 119
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 87, 0

Conread position: 504-667
Cow position: chr28:28903525-28903360 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 120
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 80, 0

Conread position: 504-671
Cow position: chr28:26868116-26867951 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 133
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 85, 0

Conread position: 504-672
Cow position: chr28:3445446-3445275 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 126
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 67, 21

Conread position: 504-672
Cow position: chr28:4090023-4089857 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 123
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 21, 28

Conread position: 504-672
Cow position: chr28:4282456-4282285 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 129
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 103, 82

Conread position: 504-672
Cow position: chr28:4884221-4884049 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 130
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 21, 0

Conread position: 504-672
Cow position: chr28:5437050-5436882 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 138
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 87, 33

Conread position: 504-672
Cow position: chr28:5805702-5805866 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 127
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 113, 0

Conread position: 504-672
Cow position: chr28:7547174-7547006 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 93
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 504-672
Cow position: chr28:8681395-8681233 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 128
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 92, 0

Conread position: 504-672
Cow position: chr28:10252882-10252711 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 125
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 84, 0

Conread position: 504-672
Cow position: chr28:11585167-11585005 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 125
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 82, 0

Conread position: 504-672
Cow position: chr28:13245596-13245768 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 121
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 101, 0

Conread position: 504-672
Cow position: chr28:19262552-19262380 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 129
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 99, 0

Conread position: 504-672
Cow position: chr28:21207333-21207173 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 133
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 49, 80

Conread position: 504-672
Cow position: chr28:22332563-22332736 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 128
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 77, 143

Conread position: 506-635
Cow position: chr28:23793272-23793144 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 103
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 99, 50

Conread position: 506-652
Cow position: chr28:16252368-16252224 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 116
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 83, 37

Conread position: 506-656
Cow position: chr28:16569842-16569992 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 122
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 102, 36

Conread position: 506-661
Cow position: chr28:2593718-2593872 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 119
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 88, 57

Conread position: 506-667
Cow position: chr28:22500461-22500307 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 121
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 139, 30

Conread position: 506-671
Cow position: chr28:30385188-30385358 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 123
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 5, 0

Conread position: 506-672
Cow position: chr28:4077309-4077133 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 136
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 75, 0

Conread position: 506-672
Cow position: chr28:24651569-24651412 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 127
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 131, 0

Conread position: 507-667
Cow position: chr28:8304285-8304441 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 117
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 90, 0

Conread position: 507-672
Cow position: chr28:25518727-25518552 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 134
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 103, 149

Conread position: 508-672
Cow position: chr28:17738114-17737946 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 124
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 94, 0

Conread position: 509-672
Cow position: chr28:4230851-4231014 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 117
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 82, 58

Conread position: 512-669
Cow position: chr28:8656123-8655965 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 123
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 71, 109

Conread position: 512-672
Cow position: chr28:659252-659083 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 128
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 76, 0

Conread position: 512-672
Cow position: chr28:6283448-6283286 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 126
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 74, 110

Conread position: 512-672
Cow position: chr28:16767553-16767405 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 123
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 68, 0

Conread position: 513-627
Cow position: chr28:24726393-24726281 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 99
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 87, 0

Conread position: 513-652
Cow position: chr28:11310056-11309906 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 115
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 86, 0

Conread position: 513-670
Cow position: chr28:4866529-4866376 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 124
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 84, 0

Conread position: 513-672
Cow position: chr28:3759034-3759201 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 129
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 88, 0

Conread position: 513-672
Cow position: chr28:17620317-17620155 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 126
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 91, 19

Conread position: 513-672
Cow position: chr28:29500444-29500611 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 129
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 77, 0

Conread position: 514-662
Cow position: chr28:21118722-21118874 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 116
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 84, 0

Conread position: 514-672
Cow position: chr28:18791083-18791238 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 121
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 63, 0

Conread position: 515-672
Cow position: chr28:16200697-16200536 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 130
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 78, 0

Conread position: 516-667
Cow position: chr28:8283657-8283503 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 121
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 40, 83

Conread position: 517-672
Cow position: chr28:26304111-26304270 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 118
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 69, 128

Conread position: 520-654
Cow position: chr28:4100708-4100578 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 112
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 63, 0

Conread position: 520-664
Cow position: chr28:3494406-3494557 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 117
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 66, 0

Conread position: 520-664
Cow position: chr28:9069939-9070081 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 118
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 30, 83

Conread position: 520-669
Cow position: chr28:9639701-9639854 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 117
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 86, 0

Conread position: 520-671
Cow position: chr28:12430656-12430808 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 118
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 86, 49

Conread position: 520-672
Cow position: chr28:2737467-2737323 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 113
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 64, 0

Conread position: 520-672
Cow position: chr28:4016582-4016727 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 117
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 79, 0

Conread position: 520-672
Cow position: chr28:4937191-4937035 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 119
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 73, 0

Conread position: 520-672
Cow position: chr28:6301132-6301288 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 123
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 83, 0

Conread position: 520-672
Cow position: chr28:6563846-6563690 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 123
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 87, 0

Conread position: 520-672
Cow position: chr28:10495250-10495096 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 122
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 85, 125

Conread position: 520-672
Cow position: chr28:11828911-11828755 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 121
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 84, 0

Conread position: 520-672
Cow position: chr28:22371615-22371471 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 117
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 10, 0

Conread position: 520-672
Cow position: chr28:24238426-24238280 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 121
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 66, 0

Conread position: 523-670
Cow position: chr28:7523362-7523213 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 118
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 70, 41

Conread position: 524-667
Cow position: chr28:22183086-22182934 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 126
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 65, 0

Conread position: 524-670
Cow position: chr28:9285322-9285175 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 113
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 77, 87

Conread position: 524-671
Cow position: chr28:2821313-2821464 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 117
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 73, 0

Conread position: 524-672
Cow position: chr28:7132033-7131887 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 118
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 60, 0

Conread position: 524-672
Cow position: chr28:14657768-14657920 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 116
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 67, 0

Conread position: 524-672
Cow position: chr28:24767459-24767612 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 116
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 70, 0

Conread position: 524-672
Cow position: chr28:33322514-33322656 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 111
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 68, 0

Conread position: 525-659
Cow position: chr28:3311168-3311030 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 113
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 82, 0

Conread position: 525-667
Cow position: chr28:7750960-7750822 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 108
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 61, 0

Conread position: 525-670
Cow position: chr28:2435976-2435836 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 114
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 77, 42

Conread position: 525-671
Cow position: chr28:21263213-21263357 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 120
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 81, 0

Conread position: 525-672
Cow position: chr28:4588374-4588518 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 118
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 66, 0

Conread position: 525-672
Cow position: chr28:13174500-13174350 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 118
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 61, 0

Conread position: 525-672
Cow position: chr28:19394927-19395067 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 116
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 19, 0

Conread position: 525-672
Cow position: chr28:20124841-20124985 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 111
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 52, 0

Conread position: 525-672
Cow position: chr28:27787622-27787768 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 109
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 52, 0

Conread position: 525-672
Cow position: chr28:31223505-31223353 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 115
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 31, 63

Conread position: 526-664
Cow position: chr28:22278575-22278429 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 117
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 70, 0

Conread position: 527-661
Cow position: chr28:17060124-17060254 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 112
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 59, 0

Conread position: 527-667
Cow position: chr28:3257046-3257189 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 115
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 57, 0

Conread position: 527-671
Cow position: chr28:2279538-2279399 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 117
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 59, 0

Conread position: 528-672
Cow position: chr28:5725089-5724936 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 119
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 75, 109

Conread position: 529-638
Cow position: chr28:7577119-7577226 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 90
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 62, 0

Conread position: 531-656
Cow position: chr28:5188365-5188242 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 99
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 75, 0

Conread position: 531-664
Cow position: chr28:26574472-26574596 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 110
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 57, 0

Conread position: 531-672
Cow position: chr28:11815014-11814875 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 112
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 75, 0

Conread position: 532-672
Cow position: chr28:22170217-22170078 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 118
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 24, 58

Conread position: 535-661
Cow position: chr28:5294936-5294809 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 102
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 67, 112

Conread position: 536-672
Cow position: chr28:15411747-15411885 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 103
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 47, 0

Conread position: 537-663
Cow position: chr28:5428686-5428563 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 104
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 65, 0

Conread position: 537-672
Cow position: chr28:8165148-8165009 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 109
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 56, 0

Conread position: 547-672
Cow position: chr28:16964889-16964760 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 102
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 56, 0

Conread position: 550-663
Cow position: chr28:4375542-4375431 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 91
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 56, 0

Conread position: 550-672
Cow position: chr28:1825482-1825604 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 96
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 39, 102

Conread position: 556-672
Cow position: chr28:3449399-3449513 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 93
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 50, 0

Conread position: 563-672
Cow position: chr28:27941689-27941577 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 95
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 14, 6

Show alignments to all cow chromosomes.