Cow genome map
| Conread name: | Ss1.1-rcst01_n6.5 |
| Conread position: | 77-252 |
| Cow position: | chr29:30821179-30821353 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 140 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 161, 0 |
| Conread position: | 230-358 |
| Cow position: | chr29:30736522-30736650 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 98 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 230-358 |
| Cow position: | chr29:30823707-30823835 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 243-356 |
| Cow position: | chr29:28075957-28075846 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 93 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 97, 0 |
| Conread position: | 243-358 |
| Cow position: | chr29:28071640-28071525 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 93 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 358-475 |
| Cow position: | chr29:30824738-30824855 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 103 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 471-671 |
| Cow position: | chr29:30825582-30825782 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 192 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 495-673 |
| Cow position: | chr29:30738118-30738296 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 674-790 |
| Cow position: | chr29:30827716-30827832 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 100 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 788-934 |
| Cow position: | chr29:30829028-30829174 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 127 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 934-1035 |
| Cow position: | chr29:30829267-30829368 (view UCSC Genome Browser custom track) |
| Alignm length: | 102 |
| Alignm identity: | 93 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1027-1351 |
| Cow position: | chr29:30830605-30830931 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 272 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 241, 178 |
| Conread position: | 1053-1171 |
| Cow position: | chr29:43984461-43984343 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 94 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 36, 28 |
Show alignments to all cow chromosomes.