Cow genome map


           Conread name:
           Ss1.1-rcte22_m17.5
        

               Conread position:
               29-199
               

               Cow position:
               
               

               Alignm length:
               173
               

               Alignm identity:
               124
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               94, 41
               

               Conread position:
               43-335
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               206
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               75, 12
               

               Conread position:
               48-179
               

               Cow position:
               
               

               Alignm length:
               136
               

               Alignm identity:
               106
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               48-397
               

               Cow position:
               
               

               Alignm length:
               362
               

               Alignm identity:
               244
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               238, 70
               

               Conread position:
               57-187
               

               Cow position:
               
               

               Alignm length:
               134
               

               Alignm identity:
               110
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               57-203
               

               Cow position:
               
               

               Alignm length:
               147
               

               Alignm identity:
               105
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               57-276
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               160
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               63, 141
               

               Conread position:
               57-277
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               161
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               60, 142
               

               Conread position:
               57-284
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               57-284
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               169
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               57, 128
               

               Conread position:
               57-294
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               167
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               19, 122
               

               Conread position:
               57-294
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               172
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               67, 140
               

               Conread position:
               57-352
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               209
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               56, 137
               

               Conread position:
               57-352
               

               Cow position:
               
               

               Alignm length:
               298
               

               Alignm identity:
               192
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               60, 35
               

               Conread position:
               57-352
               

               Cow position:
               
               

               Alignm length:
               298
               

               Alignm identity:
               212
               

               Alignm E-value:
               8e-40
               

               Alignm gaps (pig, cow):
               60, 139
               

               Conread position:
               57-355
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               219
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               71, 125
               

               Conread position:
               57-355
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               221
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               60, 145
               

               Conread position:
               57-381
               

               Cow position:
               
               

               Alignm length:
               328
               

               Alignm identity:
               229
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               59, 141
               

               Conread position:
               57-387
               

               Cow position:
               
               

               Alignm length:
               333
               

               Alignm identity:
               238
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               70, 140
               

               Conread position:
               58-340
               

               Cow position:
               
               

               Alignm length:
               286
               

               Alignm identity:
               208
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               63, 24
               

               Conread position:
               58-371
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               223
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               68, 139
               

               Conread position:
               58-385
               

               Cow position:
               
               

               Alignm length:
               333
               

               Alignm identity:
               224
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               58, 84
               

               Conread position:
               59-378
               

               Cow position:
               
               

               Alignm length:
               329
               

               Alignm identity:
               216
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               7, 52
               

               Conread position:
               60-195
               

               Cow position:
               
               

               Alignm length:
               138
               

               Alignm identity:
               109
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               60-276
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               154
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               59, 135
               

               Conread position:
               61-198
               

               Cow position:
               
               

               Alignm length:
               140
               

               Alignm identity:
               104
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               61-198
               

               Cow position:
               
               

               Alignm length:
               141
               

               Alignm identity:
               107
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               61-203
               

               Cow position:
               
               

               Alignm length:
               143
               

               Alignm identity:
               107
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               61-203
               

               Cow position:
               
               

               Alignm length:
               148
               

               Alignm identity:
               110
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               61-270
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               153
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               63, 23
               

               Conread position:
               61-294
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               169
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               54, 17
               

               Conread position:
               61-294
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               169
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               182, 62
               

               Conread position:
               61-297
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               169
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               56, 137
               

               Conread position:
               61-350
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               202
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               57, 116
               

               Conread position:
               61-350
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               209
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               67, 143
               

               Conread position:
               61-355
               

               Cow position:
               
               

               Alignm length:
               313
               

               Alignm identity:
               205
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               69, 57
               

               Conread position:
               61-355
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               219
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               54, 143
               

               Conread position:
               61-355
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               206
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               56, 100
               

               Conread position:
               61-355
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               213
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               48, 131
               

               Conread position:
               61-374
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               232
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               297, 134
               

               Conread position:
               61-382
               

               Cow position:
               
               

               Alignm length:
               330
               

               Alignm identity:
               233
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               66, 23
               

               Conread position:
               62-368
               

               Cow position:
               
               

               Alignm length:
               313
               

               Alignm identity:
               224
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               61, 9
               

               Conread position:
               62-373
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               224
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               24, 50
               

               Conread position:
               62-373
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               226
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               28, 122
               

               Conread position:
               62-378
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               221
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               51, 139
               

               Conread position:
               62-384
               

               Cow position:
               
               

               Alignm length:
               328
               

               Alignm identity:
               226
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               109, 48
               

               Conread position:
               64-351
               

               Cow position:
               
               

               Alignm length:
               291
               

               Alignm identity:
               205
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               142, 27
               

               Conread position:
               64-372
               

               Cow position:
               
               

               Alignm length:
               312
               

               Alignm identity:
               207
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               177, 46
               

               Conread position:
               64-373
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               226
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               50, 94
               

               Conread position:
               67-347
               

               Cow position:
               
               

               Alignm length:
               286
               

               Alignm identity:
               198
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               49, 132
               

               Conread position:
               67-355
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               211
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               67-363
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               199
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               290, 7
               

               Conread position:
               67-375
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               214
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               16, 9
               

               Conread position:
               67-379
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               223
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               49, 123
               

               Conread position:
               68-293
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               171
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               49, 129
               

               Conread position:
               68-352
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               203
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               54, 30
               

               Conread position:
               69-187
               

               Cow position:
               
               

               Alignm length:
               120
               

               Alignm identity:
               94
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               72-355
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               208
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               48, 126
               

               Conread position:
               80-377
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               212
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               278, 34
               

               Conread position:
               81-284
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               155
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               5, 117
               

               Conread position:
               85-198
               

               Cow position:
               
               

               Alignm length:
               114
               

               Alignm identity:
               95
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               85-402
               

               Cow position:
               
               

               Alignm length:
               326
               

               Alignm identity:
               221
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               169, 24
               

               Conread position:
               86-355
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               198
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               42, 112
               

               Conread position:
               114-406
               

               Cow position:
               
               

               Alignm length:
               296
               

               Alignm identity:
               196
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               243, 83
               

               Conread position:
               134-349
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               157
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               129, 63
               

               Conread position:
               210-376
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               122
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               142, 40
               

               Conread position:
               211-348
               

               Cow position:
               
               

               Alignm length:
               139
               

               Alignm identity:
               104
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               37, 70
               

               Conread position:
               211-368
               

               Cow position:
               
               

               Alignm length:
               160
               

               Alignm identity:
               116
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               145, 61
               

               Conread position:
               211-371
               

               Cow position:
               
               

               Alignm length:
               164
               

               Alignm identity:
               120
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               146, 66
               

               Conread position:
               211-373
               

               Cow position:
               
               

               Alignm length:
               167
               

               Alignm identity:
               120
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               146, 55
               

               Conread position:
               212-373
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               120
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               65, 73
               

               Conread position:
               213-393
               

               Cow position:
               
               

               Alignm length:
               181
               

               Alignm identity:
               127
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               214-374
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               121
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               143, 88
               

               Conread position:
               214-409
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               139
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               117, 42
               
Show alignments to all cow chromosomes.