Cow genome map

Conread name: Ss1.1-rcte22_m17.5

Conread position: 55-352
Cow position: chr12:9143257-9143534 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 213
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 9, 29

Conread position: 57-198
Cow position: chr12:18421053-18420911 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 111
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 56, 27

Conread position: 57-205
Cow position: chr12:26317332-26317483 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 112
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 65, 0

Conread position: 57-352
Cow position: chr12:40910419-40910135 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 203
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 58, 42

Conread position: 57-355
Cow position: chr12:36544780-36544492 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 220
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 60, 150

Conread position: 57-368
Cow position: chr12:15089384-15089683 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 229
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 69, 20

Conread position: 57-371
Cow position: chr12:17031485-17031780 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 219
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 64, 112

Conread position: 57-372
Cow position: chr12:25561240-25561539 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 229
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 300, 124

Conread position: 57-373
Cow position: chr12:16670135-16670440 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 225
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 62, 144

Conread position: 57-377
Cow position: chr12:37170073-37169771 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 300, 40

Conread position: 57-386
Cow position: chr12:7110070-7110395 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 214
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 175, 50

Conread position: 57-409
Cow position: chr12:12300791-12301135 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 231
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 218, 52

Conread position: 61-203
Cow position: chr12:45820495-45820350 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 113
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 11, 0

Conread position: 61-355
Cow position: chr12:18518540-18518825 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 213
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 53, 141

Conread position: 61-356
Cow position: chr12:30805728-30806006 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 199
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 58, 0

Conread position: 61-361
Cow position: chr12:24662990-24663277 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 208
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 238, 42

Conread position: 61-364
Cow position: chr12:17269673-17269963 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 222
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 67, 137

Conread position: 61-373
Cow position: chr12:7884808-7884505 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 223
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 59, 136

Conread position: 61-374
Cow position: chr12:42879569-42879866 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 226
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 58, 23

Conread position: 61-376
Cow position: chr12:22285245-22284948 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 208
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 54, 0

Conread position: 64-199
Cow position: chr12:30819117-30819256 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 107
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 26, 14

Conread position: 64-297
Cow position: chr12:27037575-27037356 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 170
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 5, 132

Conread position: 64-352
Cow position: chr12:11056751-11057016 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 205
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 55, 130

Conread position: 64-355
Cow position: chr12:32169418-32169699 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 208
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 54, 21

Conread position: 67-186
Cow position: chr12:38454790-38454908 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 93
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 58, 0

Conread position: 67-270
Cow position: chr12:43942351-43942551 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 142
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 53, 124

Conread position: 67-341
Cow position: chr12:5632002-5631745 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 198
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 55, 122

Conread position: 67-355
Cow position: chr12:9767000-9766728 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 204
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 55, 133

Conread position: 67-355
Cow position: chr12:39486307-39486582 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 196
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 188, 17

Conread position: 67-356
Cow position: chr12:35669593-35669318 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 201
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 51, 136

Conread position: 67-373
Cow position: chr12:18123560-18123840 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 220
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 290, 43

Conread position: 76-368
Cow position: chr12:18577727-18577994 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 200
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 50, 120

Conread position: 76-373
Cow position: chr12:18583104-18582826 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 218
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 40, 59

Conread position: 77-352
Cow position: chr12:3371654-3371398 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 196
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 54, 107

Conread position: 94-355
Cow position: chr12:33948808-33949053 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 188
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 28, 104

Conread position: 111-350
Cow position: chr12:25027843-25027608 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 164
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 56, 47

Conread position: 113-383
Cow position: chr12:12232809-12233060 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 188
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 116, 75

Conread position: 142-355
Cow position: chr12:14986704-14986900 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 155
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 55, 0

Conread position: 211-370
Cow position: chr12:29731325-29731479 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 120
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 68, 0

Conread position: 211-373
Cow position: chr12:2964058-2964221 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 126
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 147, 66

Conread position: 211-373
Cow position: chr12:25528549-25528388 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 121
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 146, 61

Conread position: 211-373
Cow position: chr12:38679060-38679221 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 120
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 72, 92

Conread position: 211-378
Cow position: chr12:19272678-19272510 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 123
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 146, 66

Conread position: 212-351
Cow position: chr12:583498-583355 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 110
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 74, 0

Conread position: 212-378
Cow position: chr12:40435031-40434867 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 121
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 142, 58

Conread position: 213-355
Cow position: chr12:3579498-3579637 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 108
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 16, 0

Conread position: 213-357
Cow position: chr12:1952789-1952650 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 108
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 67, 0

Conread position: 215-374
Cow position: chr12:2835416-2835577 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 121
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 8, 50

Conread position: 216-403
Cow position: chr12:20637520-20637336 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 134
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 173, 7

Conread position: 219-350
Cow position: chr12:38165522-38165393 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 103
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 52, 0

Conread position: 244-397
Cow position: chr12:44211196-44211346 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 114
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 31, 111

Show alignments to all cow chromosomes.