Cow genome map
| Conread name: | Ss1.1-rcte22_m17.5 |
| Conread position: | 49-404 |
| Cow position: | chr14:16524618-16524271 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 249 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 65, 154 |
| Conread position: | 51-217 |
| Cow position: | chr14:27591814-27591984 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 126 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 54-381 |
| Cow position: | chr14:10078406-10078077 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 242 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 72, 142 |
| Conread position: | 57-331 |
| Cow position: | chr14:24608100-24607836 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 192 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 57, 132 |
| Conread position: | 57-351 |
| Cow position: | chr14:41966374-41966080 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 193 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 155, 21 |
| Conread position: | 57-355 |
| Cow position: | chr14:18345600-18345873 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 213 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 44, 27 |
| Conread position: | 57-355 |
| Cow position: | chr14:20640493-20640778 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 121 |
| Conread position: | 57-373 |
| Cow position: | chr14:20110589-20110889 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 222 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 52, 35 |
| Conread position: | 57-373 |
| Cow position: | chr14:41210987-41210700 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 222 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 133, 28 |
| Conread position: | 57-403 |
| Cow position: | chr14:47252091-47252433 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 227 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 110, 54 |
| Conread position: | 61-201 |
| Cow position: | chr14:37131785-37131643 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 109 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 61-270 |
| Cow position: | chr14:29698228-29698427 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 62, 23 |
| Conread position: | 61-278 |
| Cow position: | chr14:19372471-19372265 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 66, 136 |
| Conread position: | 61-352 |
| Cow position: | chr14:22989164-22988889 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 200 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 65, 50 |
| Conread position: | 61-352 |
| Cow position: | chr14:48427203-48426926 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 205 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 66, 129 |
| Conread position: | 61-356 |
| Cow position: | chr14:15492726-15492441 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 217 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 52, 135 |
| Conread position: | 62-203 |
| Cow position: | chr14:39774920-39775063 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 108 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 56, 129 |
| Conread position: | 64-281 |
| Cow position: | chr14:16256893-16256682 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 154 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 63, 20 |
| Conread position: | 64-351 |
| Cow position: | chr14:33791313-33791048 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 216 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 67-360 |
| Cow position: | chr14:26433116-26433403 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 213 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 62, 116 |
| Conread position: | 67-372 |
| Cow position: | chr14:33714553-33714836 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 220 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 48, 73 |
| Conread position: | 70-355 |
| Cow position: | chr14:24945370-24945643 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 209 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 58, 14 |
| Conread position: | 86-355 |
| Cow position: | chr14:8688404-8688664 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 193 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 122, 28 |
| Conread position: | 88-355 |
| Cow position: | chr14:7636392-7636648 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 181 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 34, 47 |
| Conread position: | 88-412 |
| Cow position: | chr14:11643153-11643452 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 226 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 30, 11 |
| Conread position: | 118-355 |
| Cow position: | chr14:10706949-10706729 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 168 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 12, 52 |
| Conread position: | 210-404 |
| Cow position: | chr14:44751033-44751224 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 163, 61 |
| Conread position: | 211-340 |
| Cow position: | chr14:21530080-21530210 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 98 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 211-349 |
| Cow position: | chr14:21357551-21357414 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 107 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 211-372 |
| Cow position: | chr14:20667015-20667174 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 123 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 146, 73 |
| Conread position: | 211-373 |
| Cow position: | chr14:47224372-47224541 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 125 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 211-379 |
| Cow position: | chr14:32784122-32784293 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 121 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 71, 0 |
Show alignments to all cow chromosomes.