Cow genome map


           Conread name:
           Ss1.1-rcte22_m17.5
        

               Conread position:
               51-355
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               213
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               69, 52
               

               Conread position:
               52-371
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               226
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               65, 18
               

               Conread position:
               54-198
               

               Cow position:
               
               

               Alignm length:
               149
               

               Alignm identity:
               116
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               14, 131
               

               Conread position:
               57-172
               

               Cow position:
               
               

               Alignm length:
               118
               

               Alignm identity:
               94
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               61, 69
               

               Conread position:
               57-198
               

               Cow position:
               
               

               Alignm length:
               144
               

               Alignm identity:
               111
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               63, 25
               

               Conread position:
               57-203
               

               Cow position:
               
               

               Alignm length:
               147
               

               Alignm identity:
               110
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               57-276
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               57-361
               

               Cow position:
               
               

               Alignm length:
               312
               

               Alignm identity:
               202
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               52, 72
               

               Conread position:
               57-370
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               212
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               52, 65
               

               Conread position:
               57-371
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               222
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               61, 84
               

               Conread position:
               57-373
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               223
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               69, 124
               

               Conread position:
               57-375
               

               Cow position:
               
               

               Alignm length:
               331
               

               Alignm identity:
               226
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               60, 141
               

               Conread position:
               57-404
               

               Cow position:
               
               

               Alignm length:
               351
               

               Alignm identity:
               222
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               186, 66
               

               Conread position:
               61-177
               

               Cow position:
               
               

               Alignm length:
               120
               

               Alignm identity:
               95
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               61-203
               

               Cow position:
               
               

               Alignm length:
               145
               

               Alignm identity:
               111
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               61-349
               

               Cow position:
               
               

               Alignm length:
               291
               

               Alignm identity:
               206
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               66, 140
               

               Conread position:
               61-349
               

               Cow position:
               
               

               Alignm length:
               293
               

               Alignm identity:
               211
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               53, 148
               

               Conread position:
               61-352
               

               Cow position:
               
               

               Alignm length:
               292
               

               Alignm identity:
               212
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               61-353
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               205
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               56, 61
               

               Conread position:
               61-355
               

               Cow position:
               
               

               Alignm length:
               296
               

               Alignm identity:
               211
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               70, 136
               

               Conread position:
               61-364
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               217
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               57, 142
               

               Conread position:
               61-379
               

               Cow position:
               
               

               Alignm length:
               328
               

               Alignm identity:
               226
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               66, 136
               

               Conread position:
               64-179
               

               Cow position:
               
               

               Alignm length:
               120
               

               Alignm identity:
               95
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               64-345
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               199
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               53, 21
               

               Conread position:
               64-355
               

               Cow position:
               
               

               Alignm length:
               292
               

               Alignm identity:
               200
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               67-203
               

               Cow position:
               
               

               Alignm length:
               137
               

               Alignm identity:
               103
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               67-278
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               154
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               67-294
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               70, 42
               

               Conread position:
               67-355
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               200
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               67-373
               

               Cow position:
               
               

               Alignm length:
               313
               

               Alignm identity:
               224
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               49, 99
               

               Conread position:
               69-175
               

               Cow position:
               
               

               Alignm length:
               108
               

               Alignm identity:
               92
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               51, 57
               

               Conread position:
               70-356
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               206
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               54, 112
               

               Conread position:
               70-382
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               223
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               47, 14
               

               Conread position:
               74-378
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               212
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               53, 115
               

               Conread position:
               85-285
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               150
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               41, 104
               

               Conread position:
               85-355
               

               Cow position:
               
               

               Alignm length:
               282
               

               Alignm identity:
               199
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               35, 111
               

               Conread position:
               87-355
               

               Cow position:
               
               

               Alignm length:
               271
               

               Alignm identity:
               198
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               27, 104
               

               Conread position:
               111-355
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               177
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               23, 82
               

               Conread position:
               111-373
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               188
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               185, 82
               

               Conread position:
               119-355
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               166
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               153, 77
               

               Conread position:
               122-373
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               179
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               126-355
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               167
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               147-373
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               161
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               199, 54
               

               Conread position:
               210-372
               

               Cow position:
               
               

               Alignm length:
               167
               

               Alignm identity:
               122
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               147, 67
               

               Conread position:
               211-352
               

               Cow position:
               
               

               Alignm length:
               142
               

               Alignm identity:
               108
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               211-355
               

               Cow position:
               
               

               Alignm length:
               146
               

               Alignm identity:
               108
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               69, 85
               

               Conread position:
               211-356
               

               Cow position:
               
               

               Alignm length:
               147
               

               Alignm identity:
               111
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               50, 71
               

               Conread position:
               211-373
               

               Cow position:
               
               

               Alignm length:
               164
               

               Alignm identity:
               120
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               146, 61
               

               Conread position:
               211-373
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               122
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               71, 146
               

               Conread position:
               211-399
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               211-402
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               69, 90
               

               Conread position:
               213-373
               

               Cow position:
               
               

               Alignm length:
               165
               

               Alignm identity:
               120
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               218-373
               

               Cow position:
               
               

               Alignm length:
               159
               

               Alignm identity:
               117
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               139, 62
               
Show alignments to all cow chromosomes.