Cow genome map


           Conread name:
           Ss1.1-rcte22_m17.5
        

               Conread position:
               37-341
               

               Cow position:
               
               

               Alignm length:
               312
               

               Alignm identity:
               222
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               54, 124
               

               Conread position:
               52-355
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               209
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               54-273
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               154
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               64, 142
               

               Conread position:
               55-355
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               211
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               58, 148
               

               Conread position:
               57-198
               

               Cow position:
               
               

               Alignm length:
               142
               

               Alignm identity:
               108
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               57-203
               

               Cow position:
               
               

               Alignm length:
               148
               

               Alignm identity:
               107
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               57-203
               

               Cow position:
               
               

               Alignm length:
               148
               

               Alignm identity:
               110
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               8, 50
               

               Conread position:
               57-334
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               198
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               60, 140
               

               Conread position:
               57-355
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               223
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 144
               

               Conread position:
               57-355
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               213
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               59, 40
               

               Conread position:
               57-355
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               214
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               57-372
               

               Cow position:
               
               

               Alignm length:
               322
               

               Alignm identity:
               224
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               69, 42
               

               Conread position:
               57-374
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               224
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               297, 35
               

               Conread position:
               57-374
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               224
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               62, 117
               

               Conread position:
               57-399
               

               Cow position:
               
               

               Alignm length:
               350
               

               Alignm identity:
               232
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               66, 139
               

               Conread position:
               57-401
               

               Cow position:
               
               

               Alignm length:
               360
               

               Alignm identity:
               237
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               23, 194
               

               Conread position:
               58-331
               

               Cow position:
               
               

               Alignm length:
               274
               

               Alignm identity:
               199
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               59-372
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               229
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               223, 51
               

               Conread position:
               59-374
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               231
               

               Alignm E-value:
               6.99949e-42
               

               Alignm gaps (pig, cow):
               54, 140
               

               Conread position:
               60-375
               

               Cow position:
               
               

               Alignm length:
               330
               

               Alignm identity:
               241
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               70, 55
               

               Conread position:
               61-186
               

               Cow position:
               
               

               Alignm length:
               128
               

               Alignm identity:
               99
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               61-203
               

               Cow position:
               
               

               Alignm length:
               144
               

               Alignm identity:
               108
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               61-203
               

               Cow position:
               
               

               Alignm length:
               145
               

               Alignm identity:
               106
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               61-278
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               161
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               55, 9
               

               Conread position:
               61-284
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               156
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               55, 99
               

               Conread position:
               61-290
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               64, 119
               

               Conread position:
               61-331
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               191
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               66, 30
               

               Conread position:
               61-348
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               193
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               61-352
               

               Cow position:
               
               

               Alignm length:
               292
               

               Alignm identity:
               204
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               61-355
               

               Cow position:
               
               

               Alignm length:
               295
               

               Alignm identity:
               211
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               61-355
               

               Cow position:
               
               

               Alignm length:
               295
               

               Alignm identity:
               203
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               61-355
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               216
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               55, 117
               

               Conread position:
               61-355
               

               Cow position:
               
               

               Alignm length:
               296
               

               Alignm identity:
               197
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               69, 108
               

               Conread position:
               61-372
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               218
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               52, 143
               

               Conread position:
               62-195
               

               Cow position:
               
               

               Alignm length:
               135
               

               Alignm identity:
               100
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               62-373
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               220
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               10, 94
               

               Conread position:
               62-382
               

               Cow position:
               
               

               Alignm length:
               327
               

               Alignm identity:
               228
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               43, 139
               

               Conread position:
               64-194
               

               Cow position:
               
               

               Alignm length:
               134
               

               Alignm identity:
               103
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               64-380
               

               Cow position:
               
               

               Alignm length:
               328
               

               Alignm identity:
               222
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               50, 134
               

               Conread position:
               67-177
               

               Cow position:
               
               

               Alignm length:
               112
               

               Alignm identity:
               90
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               95, 58
               

               Conread position:
               67-269
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               147
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               60, 132
               

               Conread position:
               67-278
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               154
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               67-355
               

               Cow position:
               
               

               Alignm length:
               291
               

               Alignm identity:
               200
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               50, 135
               

               Conread position:
               67-373
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               213
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               48, 128
               

               Conread position:
               68-205
               

               Cow position:
               
               

               Alignm length:
               141
               

               Alignm identity:
               105
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               70-355
               

               Cow position:
               
               

               Alignm length:
               286
               

               Alignm identity:
               204
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               78-412
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               228
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               221, 43
               

               Conread position:
               121-372
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               188
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               156, 76
               

               Conread position:
               134-355
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               166
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               157-361
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               86, 42
               

               Conread position:
               211-352
               

               Cow position:
               
               

               Alignm length:
               142
               

               Alignm identity:
               108
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               211-352
               

               Cow position:
               
               

               Alignm length:
               142
               

               Alignm identity:
               107
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               211-355
               

               Cow position:
               
               

               Alignm length:
               145
               

               Alignm identity:
               106
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               211-355
               

               Cow position:
               
               

               Alignm length:
               146
               

               Alignm identity:
               111
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               32, 28
               

               Conread position:
               211-355
               

               Cow position:
               
               

               Alignm length:
               145
               

               Alignm identity:
               109
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               211-373
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               117
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               211-374
               

               Cow position:
               
               

               Alignm length:
               164
               

               Alignm identity:
               118
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               87, 0
               

               Conread position:
               211-374
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               121
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               146, 66
               

               Conread position:
               211-374
               

               Cow position:
               
               

               Alignm length:
               167
               

               Alignm identity:
               119
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               146, 71
               

               Conread position:
               212-355
               

               Cow position:
               
               

               Alignm length:
               146
               

               Alignm identity:
               110
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               87, 65
               
Show alignments to all cow chromosomes.