Cow genome map


           Conread name:
           Ss1.1-rcte22_m17.5
        

               Conread position:
               28-177
               

               Cow position:
               
               

               Alignm length:
               151
               

               Alignm identity:
               111
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               8, 83
               

               Conread position:
               47-374
               

               Cow position:
               
               

               Alignm length:
               329
               

               Alignm identity:
               230
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               24, 65
               

               Conread position:
               51-204
               

               Cow position:
               
               

               Alignm length:
               156
               

               Alignm identity:
               116
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               69, 132
               

               Conread position:
               53-265
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               157
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               62, 19
               

               Conread position:
               54-373
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               226
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               64, 137
               

               Conread position:
               56-355
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               214
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               9, 15
               

               Conread position:
               57-177
               

               Cow position:
               
               

               Alignm length:
               124
               

               Alignm identity:
               100
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               57-186
               

               Cow position:
               
               

               Alignm length:
               133
               

               Alignm identity:
               102
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               64, 42
               

               Conread position:
               57-203
               

               Cow position:
               
               

               Alignm length:
               148
               

               Alignm identity:
               109
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               57-277
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               150
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               57-331
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               198
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               69, 38
               

               Conread position:
               57-351
               

               Cow position:
               
               

               Alignm length:
               298
               

               Alignm identity:
               213
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               58, 28
               

               Conread position:
               57-352
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               212
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               56, 66
               

               Conread position:
               57-352
               

               Cow position:
               
               

               Alignm length:
               296
               

               Alignm identity:
               198
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               57-355
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               206
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               52, 113
               

               Conread position:
               57-368
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               221
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               56, 36
               

               Conread position:
               57-370
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               226
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               58, 140
               

               Conread position:
               57-374
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               226
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               61, 43
               

               Conread position:
               57-375
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               218
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               300, 58
               

               Conread position:
               57-378
               

               Cow position:
               
               

               Alignm length:
               325
               

               Alignm identity:
               219
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               57, 147
               

               Conread position:
               57-395
               

               Cow position:
               
               

               Alignm length:
               343
               

               Alignm identity:
               230
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               61, 134
               

               Conread position:
               61-198
               

               Cow position:
               
               

               Alignm length:
               140
               

               Alignm identity:
               103
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               61-198
               

               Cow position:
               
               

               Alignm length:
               142
               

               Alignm identity:
               110
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               9, 84
               

               Conread position:
               61-203
               

               Cow position:
               
               

               Alignm length:
               146
               

               Alignm identity:
               110
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               28, 126
               

               Conread position:
               61-227
               

               Cow position:
               
               

               Alignm length:
               171
               

               Alignm identity:
               127
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               52, 153
               

               Conread position:
               61-273
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               59, 69
               

               Conread position:
               61-275
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               149
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               134, 0
               

               Conread position:
               61-287
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               161
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               56, 116
               

               Conread position:
               61-355
               

               Cow position:
               
               

               Alignm length:
               295
               

               Alignm identity:
               208
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               61-355
               

               Cow position:
               
               

               Alignm length:
               295
               

               Alignm identity:
               203
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               61-372
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               224
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               59, 140
               

               Conread position:
               61-373
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               202
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               57, 135
               

               Conread position:
               61-373
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               222
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               296, 49
               

               Conread position:
               61-374
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               220
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               258, 61
               

               Conread position:
               61-374
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               224
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               56, 129
               

               Conread position:
               61-375
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               221
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               66, 138
               

               Conread position:
               61-375
               

               Cow position:
               
               

               Alignm length:
               328
               

               Alignm identity:
               235
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               66, 136
               

               Conread position:
               61-381
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               221
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               62-355
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               209
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               13, 138
               

               Conread position:
               63-352
               

               Cow position:
               
               

               Alignm length:
               293
               

               Alignm identity:
               205
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               57, 21
               

               Conread position:
               63-370
               

               Cow position:
               
               

               Alignm length:
               313
               

               Alignm identity:
               217
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               56, 77
               

               Conread position:
               64-186
               

               Cow position:
               
               

               Alignm length:
               124
               

               Alignm identity:
               98
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               64-294
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               131, 0
               

               Conread position:
               64-353
               

               Cow position:
               
               

               Alignm length:
               296
               

               Alignm identity:
               205
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               55, 29
               

               Conread position:
               64-355
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               207
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               257, 20
               

               Conread position:
               66-361
               

               Cow position:
               
               

               Alignm length:
               296
               

               Alignm identity:
               198
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               67-278
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               155
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               60, 106
               

               Conread position:
               67-352
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               206
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               51, 131
               

               Conread position:
               67-355
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               207
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               67-355
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               200
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               70-319
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               172
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               47, 27
               

               Conread position:
               73-375
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               216
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               53, 24
               

               Conread position:
               73-375
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               216
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               53, 24
               

               Conread position:
               79-391
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               222
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               49, 122
               

               Conread position:
               85-355
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               193
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               41, 115
               

               Conread position:
               87-349
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               191
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               28, 113
               

               Conread position:
               88-373
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               209
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               35, 9
               

               Conread position:
               91-355
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               193
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               186, 19
               

               Conread position:
               138-367
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               164
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               219, 59
               

               Conread position:
               141-355
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               160
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               12, 57
               

               Conread position:
               194-351
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               122
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               85, 15
               

               Conread position:
               211-361
               

               Cow position:
               
               

               Alignm length:
               151
               

               Alignm identity:
               113
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               211-372
               

               Cow position:
               
               

               Alignm length:
               164
               

               Alignm identity:
               124
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               71, 92
               

               Conread position:
               211-373
               

               Cow position:
               
               

               Alignm length:
               164
               

               Alignm identity:
               122
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               143, 60
               

               Conread position:
               211-373
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               115
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               211-382
               

               Cow position:
               
               

               Alignm length:
               175
               

               Alignm identity:
               126
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               146, 60
               

               Conread position:
               211-383
               

               Cow position:
               
               

               Alignm length:
               176
               

               Alignm identity:
               128
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               71, 146
               

               Conread position:
               211-384
               

               Cow position:
               
               

               Alignm length:
               178
               

               Alignm identity:
               130
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               146, 66
               

               Conread position:
               211-399
               

               Cow position:
               
               

               Alignm length:
               193
               

               Alignm identity:
               140
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               66, 99
               

               Conread position:
               212-388
               

               Cow position:
               
               

               Alignm length:
               179
               

               Alignm identity:
               133
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               145, 51
               

               Conread position:
               227-375
               

               Cow position:
               
               

               Alignm length:
               152
               

               Alignm identity:
               114
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               26, 37
               

               Conread position:
               229-373
               

               Cow position:
               
               

               Alignm length:
               145
               

               Alignm identity:
               106
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               242-403
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               122
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               151, 40
               
Show alignments to all cow chromosomes.