Cow genome map


           Conread name:
           Ss1.1-rcte22_m17.5
        

               Conread position:
               42-378
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               231
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               77, 8
               

               Conread position:
               43-352
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               217
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               12, 56
               

               Conread position:
               44-198
               

               Cow position:
               
               

               Alignm length:
               157
               

               Alignm identity:
               118
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               49-355
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               214
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               25, 12
               

               Conread position:
               50-393
               

               Cow position:
               
               

               Alignm length:
               345
               

               Alignm identity:
               227
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               66, 73
               

               Conread position:
               51-201
               

               Cow position:
               
               

               Alignm length:
               156
               

               Alignm identity:
               119
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               51-203
               

               Cow position:
               
               

               Alignm length:
               155
               

               Alignm identity:
               113
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               51-373
               

               Cow position:
               
               

               Alignm length:
               337
               

               Alignm identity:
               233
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               64, 35
               

               Conread position:
               51-374
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               214
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               74, 0
               

               Conread position:
               54-373
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               219
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               64, 29
               

               Conread position:
               57-195
               

               Cow position:
               
               

               Alignm length:
               141
               

               Alignm identity:
               111
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               70, 29
               

               Conread position:
               57-202
               

               Cow position:
               
               

               Alignm length:
               151
               

               Alignm identity:
               114
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               57-203
               

               Cow position:
               
               

               Alignm length:
               149
               

               Alignm identity:
               114
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               70, 126
               

               Conread position:
               57-203
               

               Cow position:
               
               

               Alignm length:
               147
               

               Alignm identity:
               110
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               130, 0
               

               Conread position:
               57-278
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               162
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               8, 28
               

               Conread position:
               57-350
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               197
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               70, 31
               

               Conread position:
               57-373
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               210
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               56, 159
               

               Conread position:
               58-355
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               219
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               59-355
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               208
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               204, 16
               

               Conread position:
               59-355
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               220
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               64, 8
               

               Conread position:
               59-368
               

               Cow position:
               
               

               Alignm length:
               326
               

               Alignm identity:
               220
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               53, 26
               

               Conread position:
               59-377
               

               Cow position:
               
               

               Alignm length:
               322
               

               Alignm identity:
               225
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               62, 138
               

               Conread position:
               61-182
               

               Cow position:
               
               

               Alignm length:
               122
               

               Alignm identity:
               93
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               61-203
               

               Cow position:
               
               

               Alignm length:
               146
               

               Alignm identity:
               108
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               61-227
               

               Cow position:
               
               

               Alignm length:
               170
               

               Alignm identity:
               124
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               61-288
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               102, 49
               

               Conread position:
               61-297
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               173
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               56, 130
               

               Conread position:
               61-355
               

               Cow position:
               
               

               Alignm length:
               296
               

               Alignm identity:
               214
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               58, 135
               

               Conread position:
               61-355
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               200
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               23, 128
               

               Conread position:
               61-355
               

               Cow position:
               
               

               Alignm length:
               295
               

               Alignm identity:
               210
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               61-355
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               206
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               68, 48
               

               Conread position:
               61-356
               

               Cow position:
               
               

               Alignm length:
               296
               

               Alignm identity:
               211
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               61-358
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               205
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               113, 58
               

               Conread position:
               61-375
               

               Cow position:
               
               

               Alignm length:
               322
               

               Alignm identity:
               226
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               59, 136
               

               Conread position:
               63-195
               

               Cow position:
               
               

               Alignm length:
               140
               

               Alignm identity:
               111
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               46, 17
               

               Conread position:
               64-352
               

               Cow position:
               
               

               Alignm length:
               293
               

               Alignm identity:
               214
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               52, 134
               

               Conread position:
               67-203
               

               Cow position:
               
               

               Alignm length:
               140
               

               Alignm identity:
               109
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               50, 44
               

               Conread position:
               67-203
               

               Cow position:
               
               

               Alignm length:
               139
               

               Alignm identity:
               106
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               60, 18
               

               Conread position:
               67-371
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               216
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               60, 52
               

               Conread position:
               67-383
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               227
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               60, 132
               

               Conread position:
               68-343
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               204
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               48, 16
               

               Conread position:
               68-374
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               221
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               47, 18
               

               Conread position:
               76-373
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               217
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               43, 113
               

               Conread position:
               88-373
               

               Cow position:
               
               

               Alignm length:
               292
               

               Alignm identity:
               203
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               38, 109
               

               Conread position:
               121-371
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               176
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               57, 80
               

               Conread position:
               122-375
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               182
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               235, 66
               

               Conread position:
               200-355
               

               Cow position:
               
               

               Alignm length:
               156
               

               Alignm identity:
               113
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               209-376
               

               Cow position:
               
               

               Alignm length:
               168
               

               Alignm identity:
               124
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               92, 0
               

               Conread position:
               210-382
               

               Cow position:
               
               

               Alignm length:
               173
               

               Alignm identity:
               123
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               211-355
               

               Cow position:
               
               

               Alignm length:
               145
               

               Alignm identity:
               107
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               211-355
               

               Cow position:
               
               

               Alignm length:
               145
               

               Alignm identity:
               110
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               211-368
               

               Cow position:
               
               

               Alignm length:
               160
               

               Alignm identity:
               117
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               18, 72
               

               Conread position:
               211-372
               

               Cow position:
               
               

               Alignm length:
               169
               

               Alignm identity:
               124
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               71, 58
               

               Conread position:
               211-375
               

               Cow position:
               
               

               Alignm length:
               165
               

               Alignm identity:
               119
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               211-375
               

               Cow position:
               
               

               Alignm length:
               165
               

               Alignm identity:
               118
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               211-377
               

               Cow position:
               
               

               Alignm length:
               168
               

               Alignm identity:
               121
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               145, 66
               

               Conread position:
               211-384
               

               Cow position:
               
               

               Alignm length:
               174
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               211-394
               

               Cow position:
               
               

               Alignm length:
               187
               

               Alignm identity:
               132
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               65, 144
               

               Conread position:
               212-367
               

               Cow position:
               
               

               Alignm length:
               158
               

               Alignm identity:
               117
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               70, 44
               

               Conread position:
               223-355
               

               Cow position:
               
               

               Alignm length:
               134
               

               Alignm identity:
               100
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               57, 0
               
Show alignments to all cow chromosomes.