Cow genome map

Conread name: Ss1.1-rcte22_m17.5

Conread position: 33-366
Cow position:
Alignm length: 340
Alignm identity: 233
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 32, 174

Conread position: 38-355
Cow position:
Alignm length: 322
Alignm identity: 224
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 79, 161

Conread position: 47-185
Cow position:
Alignm length: 142
Alignm identity: 110
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 80, 0

Conread position: 48-365
Cow position:
Alignm length: 330
Alignm identity: 212
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 69, 18

Conread position: 52-373
Cow position:
Alignm length: 324
Alignm identity: 222
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 77, 131

Conread position: 57-203
Cow position:
Alignm length: 147
Alignm identity: 107
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 68, 0

Conread position: 57-352
Cow position:
Alignm length: 298
Alignm identity: 214
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 61, 112

Conread position: 57-352
Cow position:
Alignm length: 297
Alignm identity: 203
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 56, 139

Conread position: 57-355
Cow position:
Alignm length: 302
Alignm identity: 218
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 69, 99

Conread position: 57-355
Cow position:
Alignm length: 300
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 69

Conread position: 57-355
Cow position:
Alignm length: 307
Alignm identity: 200
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 57, 192

Conread position: 57-381
Cow position:
Alignm length: 328
Alignm identity: 234
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 61, 24

Conread position: 58-384
Cow position:
Alignm length: 329
Alignm identity: 233
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 62, 28

Conread position: 60-355
Cow position:
Alignm length: 300
Alignm identity: 200
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 56, 41

Conread position: 61-203
Cow position:
Alignm length: 144
Alignm identity: 108
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 61, 0

Conread position: 61-276
Cow position:
Alignm length: 220
Alignm identity: 155
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 54, 143

Conread position: 61-298
Cow position:
Alignm length: 243
Alignm identity: 174
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 50, 141

Conread position: 61-347
Cow position:
Alignm length: 290
Alignm identity: 209
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 53, 134

Conread position: 61-373
Cow position:
Alignm length: 319
Alignm identity: 213
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 65, 142

Conread position: 61-394
Cow position:
Alignm length: 337
Alignm identity: 238
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 63, 135

Conread position: 62-373
Cow position:
Alignm length: 313
Alignm identity: 207
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 286, 57

Conread position: 63-221
Cow position:
Alignm length: 163
Alignm identity: 121
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 52, 103

Conread position: 63-351
Cow position:
Alignm length: 291
Alignm identity: 202
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 64, 77

Conread position: 63-355
Cow position:
Alignm length: 313
Alignm identity: 210
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 50, 21

Conread position: 67-177
Cow position:
Alignm length: 114
Alignm identity: 92
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 48, 0

Conread position: 69-201
Cow position:
Alignm length: 134
Alignm identity: 100
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 46, 0

Conread position: 76-375
Cow position:
Alignm length: 313
Alignm identity: 219
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 43, 123

Conread position: 78-275
Cow position:
Alignm length: 198
Alignm identity: 147
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 117, 0

Conread position: 85-352
Cow position:
Alignm length: 270
Alignm identity: 200
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 28, 108

Conread position: 125-372
Cow position:
Alignm length: 248
Alignm identity: 165
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 76, 0

Conread position: 126-372
Cow position:
Alignm length: 253
Alignm identity: 182
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 147, 71

Conread position: 131-352
Cow position:
Alignm length: 223
Alignm identity: 162
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 124, 58

Conread position: 142-372
Cow position:
Alignm length: 233
Alignm identity: 164
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 215, 58

Conread position: 209-365
Cow position:
Alignm length: 158
Alignm identity: 119
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 148, 62

Conread position: 211-373
Cow position:
Alignm length: 164
Alignm identity: 120
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 145, 66

Conread position: 211-404
Cow position:
Alignm length: 197
Alignm identity: 143
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 164, 60

Conread position: 213-404
Cow position:
Alignm length: 194
Alignm identity: 136
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 144, 58

Show alignments to all cow chromosomes.