Cow genome map

Conread name: Ss1.1-rcte22_m17.5

Conread position: 42-204
Cow position:
Alignm length: 165
Alignm identity: 125
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 79, 8

Conread position: 42-351
Cow position:
Alignm length: 315
Alignm identity: 217
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 67, 8

Conread position: 48-351
Cow position:
Alignm length: 308
Alignm identity: 198
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 67, 19

Conread position: 54-372
Cow position:
Alignm length: 319
Alignm identity: 219
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 21, 0

Conread position: 54-381
Cow position:
Alignm length: 337
Alignm identity: 239
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 49, 123

Conread position: 56-275
Cow position:
Alignm length: 222
Alignm identity: 163
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 71, 44

Conread position: 57-198
Cow position:
Alignm length: 145
Alignm identity: 111
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 61, 0

Conread position: 57-352
Cow position:
Alignm length: 298
Alignm identity: 204
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 59, 142

Conread position: 57-373
Cow position:
Alignm length: 320
Alignm identity: 221
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 69, 124

Conread position: 57-374
Cow position:
Alignm length: 327
Alignm identity: 241
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 27, 146

Conread position: 58-196
Cow position:
Alignm length: 141
Alignm identity: 107
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 59, 0

Conread position: 58-203
Cow position:
Alignm length: 146
Alignm identity: 112
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 52, 0

Conread position: 58-351
Cow position:
Alignm length: 295
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 138

Conread position: 60-355
Cow position:
Alignm length: 297
Alignm identity: 206
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 56, 70

Conread position: 61-169
Cow position:
Alignm length: 111
Alignm identity: 91
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 62, 77

Conread position: 61-195
Cow position:
Alignm length: 140
Alignm identity: 109
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 48, 94

Conread position: 61-347
Cow position:
Alignm length: 287
Alignm identity: 209
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 23, 0

Conread position: 61-349
Cow position:
Alignm length: 293
Alignm identity: 211
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 9, 51

Conread position: 61-355
Cow position:
Alignm length: 297
Alignm identity: 209
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 216, 49

Conread position: 61-355
Cow position:
Alignm length: 296
Alignm identity: 200
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 193, 13

Conread position: 61-373
Cow position:
Alignm length: 317
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 296, 57

Conread position: 61-382
Cow position:
Alignm length: 329
Alignm identity: 229
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 57, 24

Conread position: 61-383
Cow position:
Alignm length: 330
Alignm identity: 221
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 60, 17

Conread position: 61-398
Cow position:
Alignm length: 339
Alignm identity: 231
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 293, 53

Conread position: 62-373
Cow position:
Alignm length: 319
Alignm identity: 222
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 58, 48

Conread position: 63-370
Cow position:
Alignm length: 314
Alignm identity: 219
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 207, 47

Conread position: 64-349
Cow position:
Alignm length: 286
Alignm identity: 203
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 133, 0

Conread position: 64-355
Cow position:
Alignm length: 295
Alignm identity: 202
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 49, 20

Conread position: 64-373
Cow position:
Alignm length: 314
Alignm identity: 220
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 59, 133

Conread position: 67-355
Cow position:
Alignm length: 298
Alignm identity: 201
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 41, 131

Conread position: 67-371
Cow position:
Alignm length: 306
Alignm identity: 217
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 287, 25

Conread position: 67-373
Cow position:
Alignm length: 313
Alignm identity: 224
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 50, 137

Conread position: 67-378
Cow position:
Alignm length: 325
Alignm identity: 214
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 55, 159

Conread position: 68-374
Cow position:
Alignm length: 312
Alignm identity: 223
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 48, 91

Conread position: 70-356
Cow position:
Alignm length: 299
Alignm identity: 207
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 57, 133

Conread position: 76-373
Cow position:
Alignm length: 319
Alignm identity: 213
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 41, 118

Conread position: 77-373
Cow position:
Alignm length: 306
Alignm identity: 200
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 128, 23

Conread position: 83-355
Cow position:
Alignm length: 276
Alignm identity: 196
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 44, 117

Conread position: 85-352
Cow position:
Alignm length: 271
Alignm identity: 190
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 45, 114

Conread position: 98-381
Cow position:
Alignm length: 290
Alignm identity: 198
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 22, 60

Conread position: 112-373
Cow position:
Alignm length: 270
Alignm identity: 188
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 6, 86

Conread position: 113-378
Cow position:
Alignm length: 267
Alignm identity: 188
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 157, 59

Conread position: 113-393
Cow position:
Alignm length: 284
Alignm identity: 195
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 254, 87

Conread position: 211-349
Cow position:
Alignm length: 139
Alignm identity: 102
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 68, 0

Conread position: 211-355
Cow position:
Alignm length: 145
Alignm identity: 111
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 52, 0

Conread position: 211-355
Cow position:
Alignm length: 145
Alignm identity: 107
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 68, 0

Conread position: 211-355
Cow position:
Alignm length: 145
Alignm identity: 105
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 60, 0

Conread position: 211-356
Cow position:
Alignm length: 146
Alignm identity: 108
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 17, 0

Conread position: 211-368
Cow position:
Alignm length: 158
Alignm identity: 118
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 66, 0

Conread position: 211-371
Cow position:
Alignm length: 164
Alignm identity: 123
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 146, 60

Conread position: 211-372
Cow position:
Alignm length: 162
Alignm identity: 122
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 71, 0

Conread position: 211-374
Cow position:
Alignm length: 164
Alignm identity: 116
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 68, 0

Conread position: 212-371
Cow position:
Alignm length: 164
Alignm identity: 118
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 70, 0

Conread position: 213-355
Cow position:
Alignm length: 143
Alignm identity: 107
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 67, 0

Conread position: 213-363
Cow position:
Alignm length: 151
Alignm identity: 113
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 58, 0

Conread position: 214-371
Cow position:
Alignm length: 160
Alignm identity: 115
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 86, 49

Conread position: 215-404
Cow position:
Alignm length: 190
Alignm identity: 130
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 67, 0

Show alignments to all cow chromosomes.