Cow genome map

Conread name: Ss1.1-rcte22_m17.5

Conread position: 48-355
Cow position: chr27:427023-426735 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 9

Conread position: 57-278
Cow position: chr27:4673067-4672852 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 165
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 58, 146

Conread position: 57-347
Cow position: chr27:23890987-23890706 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 201
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 50, 144

Conread position: 57-349
Cow position: chr27:19685663-19685939 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 215
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 68, 139

Conread position: 57-355
Cow position: chr27:19388062-19387786 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 218
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 213, 44

Conread position: 57-370
Cow position: chr27:815414-815083 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 224
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 52, 80

Conread position: 57-373
Cow position: chr27:16103856-16103555 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 229
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 59, 125

Conread position: 57-382
Cow position: chr27:22220604-22220284 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 226
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 71, 142

Conread position: 57-382
Cow position: chr27:30988844-30988511 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 213
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 148, 62

Conread position: 59-373
Cow position: chr27:23559984-23560281 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 219
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 67, 137

Conread position: 61-349
Cow position: chr27:27694727-27695004 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 206
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 60, 127

Conread position: 61-351
Cow position: chr27:435279-435001 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 198
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 40, 30

Conread position: 61-355
Cow position: chr27:23452503-23452228 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 207
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 58, 0

Conread position: 64-203
Cow position: chr27:16625939-16625802 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 114
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 63, 47

Conread position: 64-349
Cow position: chr27:23107860-23108131 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 206
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 59, 109

Conread position: 64-373
Cow position: chr27:23511031-23510718 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 220
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 60, 127

Conread position: 67-349
Cow position: chr27:4720074-4720355 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 194
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 55, 40

Conread position: 67-355
Cow position: chr27:15408996-15409260 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 205
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 61, 130

Conread position: 67-376
Cow position: chr27:12459319-12459034 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 225
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 68, 15

Conread position: 68-373
Cow position: chr27:20517696-20517397 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 206
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 16, 30

Conread position: 76-352
Cow position: chr27:7412414-7412162 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 195
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 39, 0

Conread position: 76-404
Cow position: chr27:23918000-23918315 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 223
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 34, 11

Conread position: 85-361
Cow position: chr27:590740-591010 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 193
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 30, 112

Conread position: 87-355
Cow position: chr27:237288-237017 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 181
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 33, 157

Conread position: 90-368
Cow position: chr27:19509030-19508763 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 202
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 21, 109

Conread position: 94-373
Cow position: chr27:31210559-31210297 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 198
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 23, 51

Conread position: 111-368
Cow position: chr27:27055278-27055048 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 181
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 11, 0

Conread position: 138-355
Cow position: chr27:26323415-26323207 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 159
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 144, 19

Conread position: 211-349
Cow position: chr27:26504212-26504075 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 107
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 114, 60

Conread position: 211-352
Cow position: chr27:178770-178631 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 106
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 67, 0

Conread position: 211-355
Cow position: chr27:6106611-6106472 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 111
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 60, 0

Conread position: 211-361
Cow position: chr27:31183483-31183331 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 113
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 69, 141

Conread position: 211-373
Cow position: chr27:11133994-11133832 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 119
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 146, 60

Conread position: 211-373
Cow position: chr27:19452909-19452746 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 115
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 65, 0

Conread position: 212-363
Cow position: chr27:19576417-19576567 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 115
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 133, 65

Conread position: 213-355
Cow position: chr27:22748233-22748093 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 106
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 65, 0

Conread position: 213-363
Cow position: chr27:22150789-22150936 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 112
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 58, 0

Conread position: 222-382
Cow position: chr27:23527605-23527762 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 116
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 149, 73

Show alignments to all cow chromosomes.