Cow genome map


           Conread name:
           Ss1.1-rcte22_m17.5
        

               Conread position:
               50-293
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               179
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               66, 23
               

               Conread position:
               51-202
               

               Cow position:
               
               

               Alignm length:
               160
               

               Alignm identity:
               119
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               51-203
               

               Cow position:
               
               

               Alignm length:
               156
               

               Alignm identity:
               119
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               68, 50
               

               Conread position:
               56-355
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               208
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               57-173
               

               Cow position:
               
               

               Alignm length:
               120
               

               Alignm identity:
               94
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               57-177
               

               Cow position:
               
               

               Alignm length:
               124
               

               Alignm identity:
               98
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               57-277
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               158
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               75, 143
               

               Conread position:
               57-355
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               211
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               259, 63
               

               Conread position:
               57-373
               

               Cow position:
               
               

               Alignm length:
               322
               

               Alignm identity:
               219
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               67, 78
               

               Conread position:
               58-351
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               217
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               57, 141
               

               Conread position:
               58-404
               

               Cow position:
               
               

               Alignm length:
               349
               

               Alignm identity:
               252
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 80
               

               Conread position:
               59-393
               

               Cow position:
               
               

               Alignm length:
               339
               

               Alignm identity:
               214
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               68, 141
               

               Conread position:
               61-203
               

               Cow position:
               
               

               Alignm length:
               144
               

               Alignm identity:
               110
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               65, 25
               

               Conread position:
               61-203
               

               Cow position:
               
               

               Alignm length:
               144
               

               Alignm identity:
               109
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               61-355
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               208
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               216, 14
               

               Conread position:
               61-356
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               196
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               213, 83
               

               Conread position:
               61-361
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               210
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               61-364
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               218
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               49, 134
               

               Conread position:
               61-373
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               224
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               71, 144
               

               Conread position:
               61-373
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               221
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               63, 136
               

               Conread position:
               61-373
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               228
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               135, 23
               

               Conread position:
               61-374
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               227
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               305, 61
               

               Conread position:
               64-295
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               169
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               62, 20
               

               Conread position:
               64-297
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               172
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               60, 22
               

               Conread position:
               64-355
               

               Cow position:
               
               

               Alignm length:
               293
               

               Alignm identity:
               209
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               48, 106
               

               Conread position:
               64-373
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               227
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               62, 134
               

               Conread position:
               65-280
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               154
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               51, 131
               

               Conread position:
               65-406
               

               Cow position:
               
               

               Alignm length:
               347
               

               Alignm identity:
               247
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               292, 56
               

               Conread position:
               67-194
               

               Cow position:
               
               

               Alignm length:
               128
               

               Alignm identity:
               99
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               67-199
               

               Cow position:
               
               

               Alignm length:
               135
               

               Alignm identity:
               106
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               51, 114
               

               Conread position:
               67-206
               

               Cow position:
               
               

               Alignm length:
               142
               

               Alignm identity:
               108
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               57, 43
               

               Conread position:
               67-355
               

               Cow position:
               
               

               Alignm length:
               296
               

               Alignm identity:
               207
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               57, 133
               

               Conread position:
               67-355
               

               Cow position:
               
               

               Alignm length:
               292
               

               Alignm identity:
               204
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               59, 124
               

               Conread position:
               67-372
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               208
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               138, 294
               

               Conread position:
               68-373
               

               Cow position:
               
               

               Alignm length:
               312
               

               Alignm identity:
               220
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               16, 47
               

               Conread position:
               69-298
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               74-372
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               215
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               42, 75
               

               Conread position:
               76-373
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               208
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               206, 35
               

               Conread position:
               77-355
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               209
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               80-355
               

               Cow position:
               
               

               Alignm length:
               276
               

               Alignm identity:
               203
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               83-355
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               194
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               7, 116
               

               Conread position:
               85-374
               

               Cow position:
               
               

               Alignm length:
               292
               

               Alignm identity:
               205
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               272, 25
               

               Conread position:
               86-355
               

               Cow position:
               
               

               Alignm length:
               274
               

               Alignm identity:
               181
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               42, 189
               

               Conread position:
               89-361
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               191
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               189, 28
               

               Conread position:
               105-373
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               196
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               253, 17
               

               Conread position:
               211-352
               

               Cow position:
               
               

               Alignm length:
               142
               

               Alignm identity:
               107
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               211-355
               

               Cow position:
               
               

               Alignm length:
               145
               

               Alignm identity:
               109
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               211-373
               

               Cow position:
               
               

               Alignm length:
               165
               

               Alignm identity:
               119
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               146, 61
               

               Conread position:
               211-374
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               126
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               43, 38
               

               Conread position:
               211-404
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               138
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               146, 45
               

               Conread position:
               213-374
               

               Cow position:
               
               

               Alignm length:
               170
               

               Alignm identity:
               126
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               215-373
               

               Cow position:
               
               

               Alignm length:
               165
               

               Alignm identity:
               120
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               142, 0
               
Show alignments to all cow chromosomes.