Cow genome map


           Conread name:
           Ss1.1-rcte22_m17.5
        

               Conread position:
               43-382
               

               Cow position:
               
               

               Alignm length:
               347
               

               Alignm identity:
               236
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               12, 160
               

               Conread position:
               52-369
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               207
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               230, 126
               

               Conread position:
               54-296
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               163
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               204, 146
               

               Conread position:
               55-406
               

               Cow position:
               
               

               Alignm length:
               367
               

               Alignm identity:
               245
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               66, 10
               

               Conread position:
               57-195
               

               Cow position:
               
               

               Alignm length:
               142
               

               Alignm identity:
               110
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               62, 53
               

               Conread position:
               57-198
               

               Cow position:
               
               

               Alignm length:
               148
               

               Alignm identity:
               113
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               27, 56
               

               Conread position:
               57-270
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               160
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               60, 139
               

               Conread position:
               57-340
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               206
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               67, 140
               

               Conread position:
               57-355
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               200
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               121, 62
               

               Conread position:
               57-355
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               212
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               60, 118
               

               Conread position:
               57-355
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               224
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               68, 141
               

               Conread position:
               57-374
               

               Cow position:
               
               

               Alignm length:
               328
               

               Alignm identity:
               216
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               57, 94
               

               Conread position:
               59-352
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               192
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               59-353
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               209
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               67, 123
               

               Conread position:
               59-374
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               216
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               68, 143
               

               Conread position:
               61-177
               

               Cow position:
               
               

               Alignm length:
               118
               

               Alignm identity:
               94
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               61-198
               

               Cow position:
               
               

               Alignm length:
               140
               

               Alignm identity:
               106
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               61-203
               

               Cow position:
               
               

               Alignm length:
               145
               

               Alignm identity:
               107
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               61-292
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               48, 136
               

               Conread position:
               61-297
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               171
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               61-352
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               218
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               216, 49
               

               Conread position:
               61-352
               

               Cow position:
               
               

               Alignm length:
               295
               

               Alignm identity:
               215
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               58, 137
               

               Conread position:
               61-355
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               206
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               9, 144
               

               Conread position:
               61-355
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               207
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               60, 115
               

               Conread position:
               61-365
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               217
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               297, 46
               

               Conread position:
               61-373
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               221
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               31, 52
               

               Conread position:
               61-374
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               215
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               56, 30
               

               Conread position:
               61-381
               

               Cow position:
               
               

               Alignm length:
               329
               

               Alignm identity:
               233
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               55, 111
               

               Conread position:
               61-385
               

               Cow position:
               
               

               Alignm length:
               330
               

               Alignm identity:
               233
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               55, 143
               

               Conread position:
               61-394
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               243
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               296, 49
               

               Conread position:
               64-355
               

               Cow position:
               
               

               Alignm length:
               295
               

               Alignm identity:
               215
               

               Alignm E-value:
               8.00001e-42
               

               Alignm gaps (pig, cow):
               53, 15
               

               Conread position:
               64-407
               

               Cow position:
               
               

               Alignm length:
               351
               

               Alignm identity:
               242
               

               Alignm E-value:
               7.00005e-41
               

               Alignm gaps (pig, cow):
               60, 35
               

               Conread position:
               67-174
               

               Cow position:
               
               

               Alignm length:
               110
               

               Alignm identity:
               90
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               67-269
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               53, 44
               

               Conread position:
               67-291
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               168
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               50, 13
               

               Conread position:
               67-355
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               215
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               58, 26
               

               Conread position:
               67-355
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               200
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               215, 114
               

               Conread position:
               67-356
               

               Cow position:
               
               

               Alignm length:
               293
               

               Alignm identity:
               212
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               55, 131
               

               Conread position:
               67-373
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               212
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               61, 9
               

               Conread position:
               67-378
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               224
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               186, 43
               

               Conread position:
               67-378
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               221
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               61, 136
               

               Conread position:
               67-403
               

               Cow position:
               
               

               Alignm length:
               337
               

               Alignm identity:
               226
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               75-369
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               219
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               34, 22
               

               Conread position:
               76-204
               

               Cow position:
               
               

               Alignm length:
               132
               

               Alignm identity:
               101
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               77-373
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               206
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               38, 73
               

               Conread position:
               77-373
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               208
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               280, 33
               

               Conread position:
               85-355
               

               Cow position:
               
               

               Alignm length:
               276
               

               Alignm identity:
               199
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               41, 18
               

               Conread position:
               85-376
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               206
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               42, 26
               

               Conread position:
               85-376
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               200
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               28, 112
               

               Conread position:
               101-355
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               183
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               19, 45
               

               Conread position:
               102-355
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               184
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               25, 95
               

               Conread position:
               104-355
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               182
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               16, 96
               

               Conread position:
               122-373
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               183
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               56, 95
               

               Conread position:
               125-355
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               129-355
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               133-373
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               176
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               224, 55
               

               Conread position:
               134-384
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               179
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               191, 61
               

               Conread position:
               198-372
               

               Cow position:
               
               

               Alignm length:
               179
               

               Alignm identity:
               127
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               12, 82
               

               Conread position:
               211-351
               

               Cow position:
               
               

               Alignm length:
               141
               

               Alignm identity:
               106
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               73, 0
               

               Conread position:
               211-352
               

               Cow position:
               
               

               Alignm length:
               143
               

               Alignm identity:
               107
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               60, 52
               

               Conread position:
               211-355
               

               Cow position:
               
               

               Alignm length:
               148
               

               Alignm identity:
               109
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               75, 60
               

               Conread position:
               211-355
               

               Cow position:
               
               

               Alignm length:
               145
               

               Alignm identity:
               108
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               211-355
               

               Cow position:
               
               

               Alignm length:
               145
               

               Alignm identity:
               110
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               211-355
               

               Cow position:
               
               

               Alignm length:
               146
               

               Alignm identity:
               108
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               211-355
               

               Cow position:
               
               

               Alignm length:
               145
               

               Alignm identity:
               106
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               211-355
               

               Cow position:
               
               

               Alignm length:
               150
               

               Alignm identity:
               112
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               211-355
               

               Cow position:
               
               

               Alignm length:
               145
               

               Alignm identity:
               106
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               211-356
               

               Cow position:
               
               

               Alignm length:
               146
               

               Alignm identity:
               110
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               211-372
               

               Cow position:
               
               

               Alignm length:
               162
               

               Alignm identity:
               119
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               211-373
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               122
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               211-373
               

               Cow position:
               
               

               Alignm length:
               164
               

               Alignm identity:
               123
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               146, 66
               

               Conread position:
               211-374
               

               Cow position:
               
               

               Alignm length:
               164
               

               Alignm identity:
               118
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               211-374
               

               Cow position:
               
               

               Alignm length:
               164
               

               Alignm identity:
               118
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               213-356
               

               Cow position:
               
               

               Alignm length:
               144
               

               Alignm identity:
               105
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               213-373
               

               Cow position:
               
               

               Alignm length:
               161
               

               Alignm identity:
               122
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               213-373
               

               Cow position:
               
               

               Alignm length:
               161
               

               Alignm identity:
               119
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               37, 0
               
Show alignments to all cow chromosomes.