Cow genome map


           Conread name:
           Ss1.1-rcte22_m17.5
        

               Conread position:
               35-388
               

               Cow position:
               
               

               Alignm length:
               359
               

               Alignm identity:
               246
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               101, 20
               

               Conread position:
               48-383
               

               Cow position:
               
               

               Alignm length:
               343
               

               Alignm identity:
               221
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               118, 22
               

               Conread position:
               48-399
               

               Cow position:
               
               

               Alignm length:
               358
               

               Alignm identity:
               240
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               71, 124
               

               Conread position:
               51-373
               

               Cow position:
               
               

               Alignm length:
               325
               

               Alignm identity:
               230
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               306, 74
               

               Conread position:
               57-195
               

               Cow position:
               
               

               Alignm length:
               140
               

               Alignm identity:
               116
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               57-195
               

               Cow position:
               
               

               Alignm length:
               140
               

               Alignm identity:
               104
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               57-203
               

               Cow position:
               
               

               Alignm length:
               151
               

               Alignm identity:
               112
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               27, 80
               

               Conread position:
               57-203
               

               Cow position:
               
               

               Alignm length:
               150
               

               Alignm identity:
               110
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               57-278
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               157
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               57-310
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               184
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               59, 23
               

               Conread position:
               57-337
               

               Cow position:
               
               

               Alignm length:
               282
               

               Alignm identity:
               197
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               47, 131
               

               Conread position:
               57-355
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               217
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               52, 147
               

               Conread position:
               57-361
               

               Cow position:
               
               

               Alignm length:
               313
               

               Alignm identity:
               217
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               57, 27
               

               Conread position:
               57-371
               

               Cow position:
               
               

               Alignm length:
               321
               

               Alignm identity:
               227
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               242, 53
               

               Conread position:
               57-373
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               224
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               59, 33
               

               Conread position:
               57-373
               

               Cow position:
               
               

               Alignm length:
               322
               

               Alignm identity:
               233
               

               Alignm E-value:
               8.99634e-43
               

               Alignm gaps (pig, cow):
               58, 28
               

               Conread position:
               57-373
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               223
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               172, 53
               

               Conread position:
               57-373
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               225
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               68, 137
               

               Conread position:
               58-355
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               219
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               59, 140
               

               Conread position:
               59-356
               

               Cow position:
               
               

               Alignm length:
               298
               

               Alignm identity:
               215
               

               Alignm E-value:
               7.00005e-41
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               59-361
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               217
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               60, 52
               

               Conread position:
               59-373
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               212
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               60-336
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               190
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               151, 48
               

               Conread position:
               61-196
               

               Cow position:
               
               

               Alignm length:
               137
               

               Alignm identity:
               104
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               55, 121
               

               Conread position:
               61-199
               

               Cow position:
               
               

               Alignm length:
               142
               

               Alignm identity:
               113
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               61-295
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               171
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               52, 66
               

               Conread position:
               61-316
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               153
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               58, 138
               

               Conread position:
               61-326
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               188
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               53, 136
               

               Conread position:
               61-351
               

               Cow position:
               
               

               Alignm length:
               293
               

               Alignm identity:
               198
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               53, 135
               

               Conread position:
               61-354
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               205
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               61-355
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               208
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               80, 137
               

               Conread position:
               61-355
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               201
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               53, 23
               

               Conread position:
               61-355
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               213
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               60, 141
               

               Conread position:
               61-359
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               215
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               50, 139
               

               Conread position:
               61-363
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               217
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               66, 126
               

               Conread position:
               61-373
               

               Cow position:
               
               

               Alignm length:
               313
               

               Alignm identity:
               223
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               61-373
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               219
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               293, 136
               

               Conread position:
               61-389
               

               Cow position:
               
               

               Alignm length:
               337
               

               Alignm identity:
               235
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               72, 37
               

               Conread position:
               63-269
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               151
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               53, 117
               

               Conread position:
               64-352
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               193
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               36, 193
               

               Conread position:
               64-371
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               224
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               179, 50
               

               Conread position:
               64-372
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               224
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               51, 16
               

               Conread position:
               66-348
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               199
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               49, 131
               

               Conread position:
               67-198
               

               Cow position:
               
               

               Alignm length:
               135
               

               Alignm identity:
               103
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               43, 103
               

               Conread position:
               67-203
               

               Cow position:
               
               

               Alignm length:
               146
               

               Alignm identity:
               113
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               60, 136
               

               Conread position:
               67-213
               

               Cow position:
               
               

               Alignm length:
               150
               

               Alignm identity:
               114
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               67-269
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               155
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               47, 127
               

               Conread position:
               67-281
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               51, 134
               

               Conread position:
               67-294
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               156
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               42, 116
               

               Conread position:
               67-355
               

               Cow position:
               
               

               Alignm length:
               293
               

               Alignm identity:
               201
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               46, 138
               

               Conread position:
               67-382
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               220
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               53, 131
               

               Conread position:
               68-355
               

               Cow position:
               
               

               Alignm length:
               292
               

               Alignm identity:
               215
               

               Alignm E-value:
               8.00001e-42
               

               Alignm gaps (pig, cow):
               16, 132
               

               Conread position:
               70-284
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               153
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               76-361
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               195
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               40, 157
               

               Conread position:
               79-374
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               208
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               34, 131
               

               Conread position:
               85-354
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               189
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               29, 112
               

               Conread position:
               85-355
               

               Cow position:
               
               

               Alignm length:
               276
               

               Alignm identity:
               178
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               32, 75
               

               Conread position:
               114-371
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               178
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               243, 38
               

               Conread position:
               118-371
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               177
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               240, 64
               

               Conread position:
               147-368
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               153
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               211-341
               

               Cow position:
               
               

               Alignm length:
               131
               

               Alignm identity:
               100
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               211-352
               

               Cow position:
               
               

               Alignm length:
               142
               

               Alignm identity:
               107
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               211-358
               

               Cow position:
               
               

               Alignm length:
               148
               

               Alignm identity:
               110
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               211-361
               

               Cow position:
               
               

               Alignm length:
               152
               

               Alignm identity:
               113
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               104, 0
               

               Conread position:
               211-373
               

               Cow position:
               
               

               Alignm length:
               164
               

               Alignm identity:
               119
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               146, 84
               

               Conread position:
               211-373
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               122
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               211-389
               

               Cow position:
               
               

               Alignm length:
               179
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               211-393
               

               Cow position:
               
               

               Alignm length:
               187
               

               Alignm identity:
               132
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               140, 84
               

               Conread position:
               211-404
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               143
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               86, 12
               

               Conread position:
               212-372
               

               Cow position:
               
               

               Alignm length:
               161
               

               Alignm identity:
               119
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               83, 0
               

               Conread position:
               213-355
               

               Cow position:
               
               

               Alignm length:
               146
               

               Alignm identity:
               110
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               213-373
               

               Cow position:
               
               

               Alignm length:
               164
               

               Alignm identity:
               119
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               144, 58
               

               Conread position:
               213-386
               

               Cow position:
               
               

               Alignm length:
               175
               

               Alignm identity:
               124
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               153, 89
               
Show alignments to all cow chromosomes.