Cow genome map


           Conread name:
           Ss1.1-rcte22_m17.5
        

               Conread position:
               47-183
               

               Cow position:
               
               

               Alignm length:
               137
               

               Alignm identity:
               103
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               48-355
               

               Cow position:
               
               

               Alignm length:
               312
               

               Alignm identity:
               223
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               18, 143
               

               Conread position:
               54-378
               

               Cow position:
               
               

               Alignm length:
               334
               

               Alignm identity:
               219
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               24, 101
               

               Conread position:
               55-203
               

               Cow position:
               
               

               Alignm length:
               152
               

               Alignm identity:
               111
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               61, 16
               

               Conread position:
               57-198
               

               Cow position:
               
               

               Alignm length:
               143
               

               Alignm identity:
               106
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               57-278
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               156
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               155, 115
               

               Conread position:
               57-282
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               67, 52
               

               Conread position:
               57-284
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               161
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               32, 66
               

               Conread position:
               57-298
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               173
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               57-326
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               190
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               67, 10
               

               Conread position:
               57-350
               

               Cow position:
               
               

               Alignm length:
               296
               

               Alignm identity:
               215
               

               Alignm E-value:
               7.00005e-41
               

               Alignm gaps (pig, cow):
               68, 83
               

               Conread position:
               57-352
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               223
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               64, 139
               

               Conread position:
               57-352
               

               Cow position:
               
               

               Alignm length:
               298
               

               Alignm identity:
               199
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               59, 142
               

               Conread position:
               57-355
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               215
               

               Alignm E-value:
               7.00005e-41
               

               Alignm gaps (pig, cow):
               58, 42
               

               Conread position:
               57-355
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               214
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               67, 133
               

               Conread position:
               57-355
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               220
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               60, 140
               

               Conread position:
               57-355
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               212
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               68, 137
               

               Conread position:
               57-372
               

               Cow position:
               
               

               Alignm length:
               333
               

               Alignm identity:
               234
               

               Alignm E-value:
               7.00005e-41
               

               Alignm gaps (pig, cow):
               130, 229
               

               Conread position:
               57-373
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               218
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               73, 27
               

               Conread position:
               57-373
               

               Cow position:
               
               

               Alignm length:
               325
               

               Alignm identity:
               234
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               220, 53
               

               Conread position:
               57-374
               

               Cow position:
               
               

               Alignm length:
               328
               

               Alignm identity:
               233
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               60, 134
               

               Conread position:
               57-383
               

               Cow position:
               
               

               Alignm length:
               335
               

               Alignm identity:
               238
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               59, 24
               

               Conread position:
               61-181
               

               Cow position:
               
               

               Alignm length:
               124
               

               Alignm identity:
               97
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               61-195
               

               Cow position:
               
               

               Alignm length:
               137
               

               Alignm identity:
               107
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               61-203
               

               Cow position:
               
               

               Alignm length:
               144
               

               Alignm identity:
               109
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               55, 70
               

               Conread position:
               61-203
               

               Cow position:
               
               

               Alignm length:
               145
               

               Alignm identity:
               110
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               63, 111
               

               Conread position:
               61-205
               

               Cow position:
               
               

               Alignm length:
               150
               

               Alignm identity:
               113
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               56, 17
               

               Conread position:
               61-272
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               155
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               63, 135
               

               Conread position:
               61-277
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               159
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               57, 50
               

               Conread position:
               61-351
               

               Cow position:
               
               

               Alignm length:
               293
               

               Alignm identity:
               207
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               57, 46
               

               Conread position:
               61-355
               

               Cow position:
               
               

               Alignm length:
               296
               

               Alignm identity:
               202
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               31, 59
               

               Conread position:
               61-355
               

               Cow position:
               
               

               Alignm length:
               295
               

               Alignm identity:
               205
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               61-355
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               205
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               63, 138
               

               Conread position:
               61-355
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               211
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               55, 76
               

               Conread position:
               61-364
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               208
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               56, 119
               

               Conread position:
               61-365
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               211
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               221, 134
               

               Conread position:
               61-380
               

               Cow position:
               
               

               Alignm length:
               334
               

               Alignm identity:
               225
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               52, 137
               

               Conread position:
               64-352
               

               Cow position:
               
               

               Alignm length:
               291
               

               Alignm identity:
               213
               

               Alignm E-value:
               8.00001e-42
               

               Alignm gaps (pig, cow):
               56, 105
               

               Conread position:
               64-352
               

               Cow position:
               
               

               Alignm length:
               292
               

               Alignm identity:
               205
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               56, 133
               

               Conread position:
               64-355
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               215
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               53, 26
               

               Conread position:
               67-186
               

               Cow position:
               
               

               Alignm length:
               122
               

               Alignm identity:
               96
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               46, 103
               

               Conread position:
               67-319
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               184
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               50, 98
               

               Conread position:
               67-355
               

               Cow position:
               
               

               Alignm length:
               295
               

               Alignm identity:
               215
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 146
               

               Conread position:
               67-356
               

               Cow position:
               
               

               Alignm length:
               292
               

               Alignm identity:
               209
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               50, 8
               

               Conread position:
               67-361
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               218
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               51, 129
               

               Conread position:
               67-373
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               233
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               47, 136
               

               Conread position:
               67-388
               

               Cow position:
               
               

               Alignm length:
               328
               

               Alignm identity:
               218
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               51, 130
               

               Conread position:
               68-351
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               189
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               54, 112
               

               Conread position:
               68-373
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               223
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               289, 42
               

               Conread position:
               69-342
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               199
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               53, 129
               

               Conread position:
               70-374
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               229
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               44, 27
               

               Conread position:
               75-368
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               200
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               34, 118
               

               Conread position:
               85-294
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               103-355
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               179
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               32, 22
               

               Conread position:
               108-331
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               162
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               9, 15
               

               Conread position:
               108-355
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               175
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               111-352
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               176
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               121-355
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               169
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               152, 75
               

               Conread position:
               135-368
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               165
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               152-352
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               144, 45
               

               Conread position:
               211-355
               

               Cow position:
               
               

               Alignm length:
               145
               

               Alignm identity:
               107
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               211-355
               

               Cow position:
               
               

               Alignm length:
               145
               

               Alignm identity:
               110
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               211-367
               

               Cow position:
               
               

               Alignm length:
               159
               

               Alignm identity:
               115
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               143, 71
               

               Conread position:
               211-373
               

               Cow position:
               
               

               Alignm length:
               169
               

               Alignm identity:
               123
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               211-382
               

               Cow position:
               
               

               Alignm length:
               176
               

               Alignm identity:
               126
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               58, 126
               

               Conread position:
               211-400
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               136
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               146, 66
               

               Conread position:
               211-412
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               147
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               146, 66
               

               Conread position:
               212-355
               

               Cow position:
               
               

               Alignm length:
               144
               

               Alignm identity:
               107
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               90, 0
               
Show alignments to all cow chromosomes.