Cow genome map


           Conread name:
           Ss1.1-rcte22_m17.5
        

               Conread position:
               51-394
               

               Cow position:
               
               

               Alignm length:
               347
               

               Alignm identity:
               231
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               245, 90
               

               Conread position:
               57-326
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               190
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               57-355
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               218
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               57-355
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               222
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               58, 148
               

               Conread position:
               57-372
               

               Cow position:
               
               

               Alignm length:
               333
               

               Alignm identity:
               224
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               52, 19
               

               Conread position:
               57-373
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               220
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               61, 140
               

               Conread position:
               57-378
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               227
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               70, 140
               

               Conread position:
               58-186
               

               Cow position:
               
               

               Alignm length:
               132
               

               Alignm identity:
               101
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               58-349
               

               Cow position:
               
               

               Alignm length:
               292
               

               Alignm identity:
               212
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               58-355
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               214
               

               Alignm E-value:
               9e-36
               

               Alignm gaps (pig, cow):
               68, 143
               

               Conread position:
               58-376
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               206
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               148, 52
               

               Conread position:
               61-175
               

               Cow position:
               
               

               Alignm length:
               116
               

               Alignm identity:
               93
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               61-203
               

               Cow position:
               
               

               Alignm length:
               143
               

               Alignm identity:
               105
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               61-274
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               152
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               51, 13
               

               Conread position:
               61-294
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               9, 142
               

               Conread position:
               61-295
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               169
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               56, 136
               

               Conread position:
               61-297
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               170
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               65, 135
               

               Conread position:
               61-327
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               191
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               56, 23
               

               Conread position:
               61-355
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               207
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               59, 164
               

               Conread position:
               61-355
               

               Cow position:
               
               

               Alignm length:
               295
               

               Alignm identity:
               208
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               73, 0
               

               Conread position:
               61-366
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               222
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               9, 23
               

               Conread position:
               61-371
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               231
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               59, 140
               

               Conread position:
               61-373
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               227
               

               Alignm E-value:
               9e-36
               

               Alignm gaps (pig, cow):
               56, 138
               

               Conread position:
               61-374
               

               Cow position:
               
               

               Alignm length:
               321
               

               Alignm identity:
               221
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               48, 138
               

               Conread position:
               61-376
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               222
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               221, 50
               

               Conread position:
               61-382
               

               Cow position:
               
               

               Alignm length:
               327
               

               Alignm identity:
               226
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               223, 50
               

               Conread position:
               64-269
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               64-355
               

               Cow position:
               
               

               Alignm length:
               292
               

               Alignm identity:
               213
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               64-368
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               214
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               62, 162
               

               Conread position:
               64-373
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               215
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               50, 34
               

               Conread position:
               67-195
               

               Cow position:
               
               

               Alignm length:
               132
               

               Alignm identity:
               105
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               67-203
               

               Cow position:
               
               

               Alignm length:
               139
               

               Alignm identity:
               105
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               67-275
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               157
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               61, 11
               

               Conread position:
               67-355
               

               Cow position:
               
               

               Alignm length:
               293
               

               Alignm identity:
               219
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 129
               

               Conread position:
               67-355
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               206
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               31, 131
               

               Conread position:
               67-355
               

               Cow position:
               
               

               Alignm length:
               291
               

               Alignm identity:
               209
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               46, 132
               

               Conread position:
               67-360
               

               Cow position:
               
               

               Alignm length:
               298
               

               Alignm identity:
               224
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               61, 117
               

               Conread position:
               67-379
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               226
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               57, 130
               

               Conread position:
               67-384
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               234
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               207, 55
               

               Conread position:
               67-388
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               229
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               260, 55
               

               Conread position:
               68-373
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               215
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               47, 120
               

               Conread position:
               68-382
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               230
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               49, 107
               

               Conread position:
               72-373
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               214
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               203, 38
               

               Conread position:
               78-373
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               212
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               43, 123
               

               Conread position:
               85-374
               

               Cow position:
               
               

               Alignm length:
               293
               

               Alignm identity:
               201
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               35, 98
               

               Conread position:
               85-381
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               208
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               38, 113
               

               Conread position:
               86-373
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               202
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               41, 160
               

               Conread position:
               88-355
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               185
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               89-355
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               192
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               36, 22
               

               Conread position:
               104-334
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               167
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               20, 7
               

               Conread position:
               112-371
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               183
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               242, 76
               

               Conread position:
               121-374
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               188
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               236, 80
               

               Conread position:
               122-379
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               187
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               204, 75
               

               Conread position:
               125-355
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               171
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               125-355
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               168
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               44, 64
               

               Conread position:
               207-373
               

               Cow position:
               
               

               Alignm length:
               169
               

               Alignm identity:
               123
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               5, 26
               

               Conread position:
               211-352
               

               Cow position:
               
               

               Alignm length:
               143
               

               Alignm identity:
               110
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               211-352
               

               Cow position:
               
               

               Alignm length:
               142
               

               Alignm identity:
               104
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               211-355
               

               Cow position:
               
               

               Alignm length:
               145
               

               Alignm identity:
               109
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               211-355
               

               Cow position:
               
               

               Alignm length:
               145
               

               Alignm identity:
               108
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               211-355
               

               Cow position:
               
               

               Alignm length:
               146
               

               Alignm identity:
               111
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               44, 61
               

               Conread position:
               211-363
               

               Cow position:
               
               

               Alignm length:
               155
               

               Alignm identity:
               113
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               146, 71
               

               Conread position:
               211-372
               

               Cow position:
               
               

               Alignm length:
               162
               

               Alignm identity:
               120
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               211-373
               

               Cow position:
               
               

               Alignm length:
               174
               

               Alignm identity:
               132
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               211-393
               

               Cow position:
               
               

               Alignm length:
               184
               

               Alignm identity:
               131
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               146, 60
               

               Conread position:
               212-383
               

               Cow position:
               
               

               Alignm length:
               176
               

               Alignm identity:
               129
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               145, 53
               

               Conread position:
               213-363
               

               Cow position:
               
               

               Alignm length:
               153
               

               Alignm identity:
               113
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               69, 120
               

               Conread position:
               213-373
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               116
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               83, 58
               

               Conread position:
               213-374
               

               Cow position:
               
               

               Alignm length:
               164
               

               Alignm identity:
               120
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               144, 69
               

               Conread position:
               214-352
               

               Cow position:
               
               

               Alignm length:
               139
               

               Alignm identity:
               107
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               223-373
               

               Cow position:
               
               

               Alignm length:
               153
               

               Alignm identity:
               114
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               35, 27
               
Show alignments to all cow chromosomes.