Cow genome map


           Conread name:
           Ss1.1-rdbla0125_e20.5
        

               Conread position:
               113-188
               

               Cow position:
               chr20:4651357-4651282 (view UCSC Genome Browser custom track)
               

               Alignm length:
               76
               

               Alignm identity:
               72
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               187-308
               

               Cow position:
               chr20:4649855-4649737 (view UCSC Genome Browser custom track)
               

               Alignm length:
               123
               

               Alignm identity:
               104
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               116, 75
               

               Conread position:
               306-532
               

               Cow position:
               chr20:4648647-4648422 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               197
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               205, 177
               

               Conread position:
               508-665
               

               Cow position:
               chr20:4648320-4648163 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               142
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               664-762
               

               Cow position:
               chr20:4646756-4646658 (view UCSC Genome Browser custom track)
               

               Alignm length:
               99
               

               Alignm identity:
               84
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               759-870
               

               Cow position:
               chr20:4645869-4645758 (view UCSC Genome Browser custom track)
               

               Alignm length:
               112
               

               Alignm identity:
               106
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               945-1292
               

               Cow position:
               chr20:4636608-4636268 (view UCSC Genome Browser custom track)
               

               Alignm length:
               353
               

               Alignm identity:
               304
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               294, 25
               
Show alignments to all cow chromosomes.