Cow genome map

Conread name: Ss1.1-rdbla0127_j23.5.5

Conread position: 170-664
Cow position: chr14:25836702-25837212 (view UCSC Genome Browser custom track)
Alignm length: 513
Alignm identity: 317
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 18, 260

Conread position: 179-1134
Cow position: chr14:25783756-25784727 (view UCSC Genome Browser custom track)
Alignm length: 976
Alignm identity: 640
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 412

Conread position: 179-1142
Cow position: chr14:3101343-3100370 (view UCSC Genome Browser custom track)
Alignm length: 982
Alignm identity: 590
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 283

Conread position: 180-1150
Cow position: chr14:25895443-25896427 (view UCSC Genome Browser custom track)
Alignm length: 987
Alignm identity: 585
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 951

Conread position: 184-876
Cow position: chr14:25860106-25860808 (view UCSC Genome Browser custom track)
Alignm length: 713
Alignm identity: 436
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 59, 230

Conread position: 184-1188
Cow position: chr14:25876485-25877504 (view UCSC Genome Browser custom track)
Alignm length: 1024
Alignm identity: 635
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 236

Conread position: 187-670
Cow position: chr14:3127769-3127271 (view UCSC Genome Browser custom track)
Alignm length: 501
Alignm identity: 309
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 52, 224

Conread position: 187-967
Cow position: chr14:25877076-25877871 (view UCSC Genome Browser custom track)
Alignm length: 798
Alignm identity: 487
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 235

Conread position: 187-1014
Cow position: chr14:25836384-25837226 (view UCSC Genome Browser custom track)
Alignm length: 844
Alignm identity: 516
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 306

Conread position: 187-1149
Cow position: chr14:25859689-25860666 (view UCSC Genome Browser custom track)
Alignm length: 982
Alignm identity: 608
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 308

Conread position: 187-1177
Cow position: chr14:25859773-25860778 (view UCSC Genome Browser custom track)
Alignm length: 1014
Alignm identity: 618
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 230

Conread position: 187-1178
Cow position: chr14:3155494-3156485 (view UCSC Genome Browser custom track)
Alignm length: 1009
Alignm identity: 614
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 300

Conread position: 187-1188
Cow position: chr14:25859437-25860453 (view UCSC Genome Browser custom track)
Alignm length: 1023
Alignm identity: 637
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 237

Conread position: 187-1201
Cow position: chr14:25876824-25877854 (view UCSC Genome Browser custom track)
Alignm length: 1038
Alignm identity: 641
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 229

Conread position: 187-1249
Cow position: chr14:25859269-25860347 (view UCSC Genome Browser custom track)
Alignm length: 1086
Alignm identity: 669
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 381

Conread position: 188-634
Cow position: chr14:25910833-25911294 (view UCSC Genome Browser custom track)
Alignm length: 466
Alignm identity: 295
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 55, 299

Conread position: 188-754
Cow position: chr14:447675-448256 (view UCSC Genome Browser custom track)
Alignm length: 582
Alignm identity: 346
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 51, 0

Conread position: 188-764
Cow position: chr14:3156152-3156734 (view UCSC Genome Browser custom track)
Alignm length: 593
Alignm identity: 357
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 61, 343

Conread position: 188-934
Cow position: chr14:25836469-25837230 (view UCSC Genome Browser custom track)
Alignm length: 763
Alignm identity: 479
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 316

Conread position: 188-1010
Cow position: chr14:3101166-3100336 (view UCSC Genome Browser custom track)
Alignm length: 837
Alignm identity: 503
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 304

Conread position: 188-1137
Cow position: chr14:25836217-25837181 (view UCSC Genome Browser custom track)
Alignm length: 967
Alignm identity: 600
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 305

Conread position: 188-1177
Cow position: chr14:3080760-3079756 (view UCSC Genome Browser custom track)
Alignm length: 1005
Alignm identity: 607
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 0

Conread position: 188-1189
Cow position: chr14:25783598-25784614 (view UCSC Genome Browser custom track)
Alignm length: 1022
Alignm identity: 662
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 225

Conread position: 188-1189
Cow position: chr14:25895032-25896048 (view UCSC Genome Browser custom track)
Alignm length: 1023
Alignm identity: 598
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 137

Conread position: 188-1249
Cow position: chr14:25836049-25837126 (view UCSC Genome Browser custom track)
Alignm length: 1079
Alignm identity: 659
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 133

Conread position: 188-1252
Cow position: chr14:25783514-25784594 (view UCSC Genome Browser custom track)
Alignm length: 1083
Alignm identity: 705
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 467

Conread position: 190-1123
Cow position: chr14:25795094-25794147 (view UCSC Genome Browser custom track)
Alignm length: 954
Alignm identity: 609
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 216

Conread position: 194-1211
Cow position: chr14:25795342-25794308 (view UCSC Genome Browser custom track)
Alignm length: 1038
Alignm identity: 640
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 625

Conread position: 248-1188
Cow position: chr14:25783745-25784697 (view UCSC Genome Browser custom track)
Alignm length: 960
Alignm identity: 635
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 167

Conread position: 270-546
Cow position: chr14:420573-420850 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 181
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 23, 62

Conread position: 277-1177
Cow position: chr14:3080827-3079924 (view UCSC Genome Browser custom track)
Alignm length: 906
Alignm identity: 558
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 730

Conread position: 279-883
Cow position: chr14:447610-448217 (view UCSC Genome Browser custom track)
Alignm length: 613
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 74

Conread position: 279-1151
Cow position: chr14:25910360-25911223 (view UCSC Genome Browser custom track)
Alignm length: 881
Alignm identity: 513
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 38, 81

Conread position: 279-1176
Cow position: chr14:3080741-3079841 (view UCSC Genome Browser custom track)
Alignm length: 903
Alignm identity: 564
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 620

Conread position: 280-1166
Cow position: chr14:3101314-3100430 (view UCSC Genome Browser custom track)
Alignm length: 893
Alignm identity: 543
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 120

Conread position: 280-1176
Cow position: chr14:3080572-3079673 (view UCSC Genome Browser custom track)
Alignm length: 901
Alignm identity: 540
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 531

Conread position: 281-1176
Cow position: chr14:3155432-3156315 (view UCSC Genome Browser custom track)
Alignm length: 901
Alignm identity: 556
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 191

Conread position: 281-1188
Cow position: chr14:680246-681156 (view UCSC Genome Browser custom track)
Alignm length: 916
Alignm identity: 557
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 200

Conread position: 281-1225
Cow position: chr14:25895473-25896420 (view UCSC Genome Browser custom track)
Alignm length: 952
Alignm identity: 534
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 36, 121

Conread position: 284-1139
Cow position: chr14:680417-681275 (view UCSC Genome Browser custom track)
Alignm length: 863
Alignm identity: 534
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 191

Conread position: 284-1173
Cow position: chr14:3128164-3127272 (view UCSC Genome Browser custom track)
Alignm length: 896
Alignm identity: 553
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 119

Conread position: 284-1248
Cow position: chr14:25836241-25837209 (view UCSC Genome Browser custom track)
Alignm length: 970
Alignm identity: 575
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 719

Conread position: 303-890
Cow position: chr14:3061273-3060686 (view UCSC Genome Browser custom track)
Alignm length: 590
Alignm identity: 336
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 176, 166

Conread position: 312-1134
Cow position: chr14:25895255-25896078 (view UCSC Genome Browser custom track)
Alignm length: 830
Alignm identity: 497
Alignm E-value: 0
Alignm gaps (pig, cow): 476, 493

Conread position: 313-1219
Cow position: chr14:25795459-25794553 (view UCSC Genome Browser custom track)
Alignm length: 913
Alignm identity: 599
Alignm E-value: 0
Alignm gaps (pig, cow): 417, 7

Conread position: 314-1176
Cow position: chr14:3080954-3080093 (view UCSC Genome Browser custom track)
Alignm length: 865
Alignm identity: 528
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 6

Conread position: 320-861
Cow position: chr14:447570-448111 (view UCSC Genome Browser custom track)
Alignm length: 543
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 351, 356

Conread position: 320-965
Cow position: chr14:25784249-25784888 (view UCSC Genome Browser custom track)
Alignm length: 651
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 557, 481

Conread position: 320-1173
Cow position: chr14:3101438-3100591 (view UCSC Genome Browser custom track)
Alignm length: 856
Alignm identity: 533
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 64

Conread position: 320-1212
Cow position: chr14:25783325-25784218 (view UCSC Genome Browser custom track)
Alignm length: 896
Alignm identity: 589
Alignm E-value: 0
Alignm gaps (pig, cow): 332, 336

Conread position: 322-1140
Cow position: chr14:3081032-3080213 (view UCSC Genome Browser custom track)
Alignm length: 822
Alignm identity: 502
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 160

Conread position: 323-1176
Cow position: chr14:3128206-3127353 (view UCSC Genome Browser custom track)
Alignm length: 857
Alignm identity: 539
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 149

Conread position: 337-1137
Cow position: chr14:25895364-25896164 (view UCSC Genome Browser custom track)
Alignm length: 805
Alignm identity: 478
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 134

Conread position: 337-1249
Cow position: chr14:3155407-3156305 (view UCSC Genome Browser custom track)
Alignm length: 915
Alignm identity: 563
Alignm E-value: 0
Alignm gaps (pig, cow): 709, 432

Conread position: 338-806
Cow position: chr14:433893-434361 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 271
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 396, 402

Conread position: 338-1137
Cow position: chr14:25877074-25877873 (view UCSC Genome Browser custom track)
Alignm length: 804
Alignm identity: 496
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 147

Conread position: 338-1141
Cow position: chr14:25895029-25895832 (view UCSC Genome Browser custom track)
Alignm length: 808
Alignm identity: 458
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 53, 66

Conread position: 338-1176
Cow position: chr14:3061658-3060820 (view UCSC Genome Browser custom track)
Alignm length: 842
Alignm identity: 485
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 403, 383

Conread position: 338-1188
Cow position: chr14:25895449-25896299 (view UCSC Genome Browser custom track)
Alignm length: 854
Alignm identity: 500
Alignm E-value: 0
Alignm gaps (pig, cow): 312, 319

Conread position: 338-1235
Cow position: chr14:25835794-25836692 (view UCSC Genome Browser custom track)
Alignm length: 903
Alignm identity: 535
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 95

Conread position: 340-1137
Cow position: chr14:25836048-25836845 (view UCSC Genome Browser custom track)
Alignm length: 800
Alignm identity: 512
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 143

Conread position: 348-1212
Cow position: chr14:25795257-25794395 (view UCSC Genome Browser custom track)
Alignm length: 870
Alignm identity: 565
Alignm E-value: 0
Alignm gaps (pig, cow): 303, 309

Conread position: 356-1173
Cow position: chr14:680240-681057 (view UCSC Genome Browser custom track)
Alignm length: 821
Alignm identity: 506
Alignm E-value: 0
Alignm gaps (pig, cow): 618, 629

Conread position: 365-1219
Cow position: chr14:680417-681272 (view UCSC Genome Browser custom track)
Alignm length: 860
Alignm identity: 529
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 104

Conread position: 365-1250
Cow position: chr14:3080820-3079934 (view UCSC Genome Browser custom track)
Alignm length: 891
Alignm identity: 552
Alignm E-value: 0
Alignm gaps (pig, cow): 521, 550

Conread position: 384-1249
Cow position: chr14:25795472-25794607 (view UCSC Genome Browser custom track)
Alignm length: 871
Alignm identity: 554
Alignm E-value: 0
Alignm gaps (pig, cow): 417, 7

Conread position: 393-1249
Cow position: chr14:25783314-25784171 (view UCSC Genome Browser custom track)
Alignm length: 861
Alignm identity: 560
Alignm E-value: 0
Alignm gaps (pig, cow): 233, 249

Conread position: 408-1149
Cow position: chr14:25876304-25877045 (view UCSC Genome Browser custom track)
Alignm length: 748
Alignm identity: 462
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 77

Conread position: 412-1176
Cow position: chr14:680212-680976 (view UCSC Genome Browser custom track)
Alignm length: 766
Alignm identity: 458
Alignm E-value: 0
Alignm gaps (pig, cow): 403, 381

Conread position: 414-967
Cow position: chr14:25910742-25911291 (view UCSC Genome Browser custom track)
Alignm length: 559
Alignm identity: 346
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 243, 48

Conread position: 414-1051
Cow position: chr14:447580-448217 (view UCSC Genome Browser custom track)
Alignm length: 641
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 318, 330

Conread position: 414-1151
Cow position: chr14:25876226-25876963 (view UCSC Genome Browser custom track)
Alignm length: 743
Alignm identity: 454
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 52

Conread position: 426-1136
Cow position: chr14:25859187-25859897 (view UCSC Genome Browser custom track)
Alignm length: 717
Alignm identity: 452
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 39

Conread position: 468-1251
Cow position: chr14:25783302-25784089 (view UCSC Genome Browser custom track)
Alignm length: 792
Alignm identity: 520
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 168

Conread position: 480-1176
Cow position: chr14:25895003-25895699 (view UCSC Genome Browser custom track)
Alignm length: 700
Alignm identity: 401
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 160, 165

Conread position: 485-978
Cow position: chr14:433872-434365 (view UCSC Genome Browser custom track)
Alignm length: 497
Alignm identity: 290
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 88, 68

Conread position: 485-1174
Cow position: chr14:447567-448256 (view UCSC Genome Browser custom track)
Alignm length: 690
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 486-1176
Cow position: chr14:3128211-3127521 (view UCSC Genome Browser custom track)
Alignm length: 694
Alignm identity: 444
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 23

Conread position: 487-900
Cow position: chr14:3155389-3155802 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 253
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 0, 0

Conread position: 487-1250
Cow position: chr14:680203-680967 (view UCSC Genome Browser custom track)
Alignm length: 766
Alignm identity: 439
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 28, 38

Conread position: 488-1150
Cow position: chr14:3061676-3061014 (view UCSC Genome Browser custom track)
Alignm length: 667
Alignm identity: 382
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 164, 169

Conread position: 488-1165
Cow position: chr14:25894927-25895604 (view UCSC Genome Browser custom track)
Alignm length: 684
Alignm identity: 407
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 82, 64

Conread position: 500-1134
Cow position: chr14:25859177-25859812 (view UCSC Genome Browser custom track)
Alignm length: 637
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 316, 305

Conread position: 500-1173
Cow position: chr14:3061328-3060655 (view UCSC Genome Browser custom track)
Alignm length: 676
Alignm identity: 389
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 242, 235

Conread position: 503-1188
Cow position: chr14:25835791-25836476 (view UCSC Genome Browser custom track)
Alignm length: 690
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 153

Conread position: 528-1151
Cow position: chr14:25835648-25836271 (view UCSC Genome Browser custom track)
Alignm length: 626
Alignm identity: 367
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 52, 58

Conread position: 563-1262
Cow position: chr14:25795462-25794763 (view UCSC Genome Browser custom track)
Alignm length: 704
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 337, 321

Conread position: 572-1176
Cow position: chr14:680204-680808 (view UCSC Genome Browser custom track)
Alignm length: 608
Alignm identity: 365
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 397, 424

Conread position: 572-1177
Cow position: chr14:447570-448175 (view UCSC Genome Browser custom track)
Alignm length: 608
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 219, 226

Conread position: 574-849
Cow position: chr14:420625-420901 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 180
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 12, 160

Conread position: 574-1133
Cow position: chr14:25910735-25911290 (view UCSC Genome Browser custom track)
Alignm length: 566
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 8

Conread position: 581-1189
Cow position: chr14:25859174-25859782 (view UCSC Genome Browser custom track)
Alignm length: 612
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 340, 331

Conread position: 588-984
Cow position: chr14:3155406-3155802 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 257
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 64, 68

Conread position: 590-1137
Cow position: chr14:3061742-3061195 (view UCSC Genome Browser custom track)
Alignm length: 551
Alignm identity: 319
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 37, 46

Conread position: 607-1173
Cow position: chr14:433826-434392 (view UCSC Genome Browser custom track)
Alignm length: 570
Alignm identity: 333
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 19, 30

Conread position: 641-1177
Cow position: chr14:447555-448091 (view UCSC Genome Browser custom track)
Alignm length: 540
Alignm identity: 328
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 339, 355

Conread position: 656-938
Cow position: chr14:420626-420906 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 183
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 154, 10

Conread position: 659-1177
Cow position: chr14:3081031-3080512 (view UCSC Genome Browser custom track)
Alignm length: 524
Alignm identity: 324
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 10, 136

Conread position: 664-1188
Cow position: chr14:25859173-25859697 (view UCSC Genome Browser custom track)
Alignm length: 527
Alignm identity: 317
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 127, 145

Conread position: 667-1176
Cow position: chr14:25876227-25876736 (view UCSC Genome Browser custom track)
Alignm length: 517
Alignm identity: 315
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 113, 85

Conread position: 701-1165
Cow position: chr14:447531-447995 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 295
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 40, 35

Conread position: 701-1221
Cow position: chr14:3128164-3127643 (view UCSC Genome Browser custom track)
Alignm length: 523
Alignm identity: 312
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 113, 107

Conread position: 748-1188
Cow position: chr14:25859173-25859613 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 273
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 403, 412

Conread position: 840-1176
Cow position: chr14:3155406-3155742 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 217
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 0, 0

Conread position: 895-1250
Cow position: chr14:25795466-25795110 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 233
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 194, 158

Show alignments to all cow chromosomes.