Cow genome map
| Conread name: | Ss1.1-rdbla0127_j23.5.5 |
| Conread position: | 179-934 |
| Cow position: | chr17:22452305-22451536 (view UCSC Genome Browser custom track) |
| Alignm length: | 775 |
| Alignm identity: | 491 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 212 |
| Conread position: | 179-1176 |
| Cow position: | chr17:22552524-22551511 (view UCSC Genome Browser custom track) |
| Alignm length: | 1016 |
| Alignm identity: | 673 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 829 |
| Conread position: | 179-1176 |
| Cow position: | chr17:22552692-22551679 (view UCSC Genome Browser custom track) |
| Alignm length: | 1014 |
| Alignm identity: | 669 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 179-1249 |
| Cow position: | chr17:22552944-22551857 (view UCSC Genome Browser custom track) |
| Alignm length: | 1088 |
| Alignm identity: | 723 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 180-1123 |
| Cow position: | chr17:22552439-22551480 (view UCSC Genome Browser custom track) |
| Alignm length: | 960 |
| Alignm identity: | 640 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 187-1249 |
| Cow position: | chr17:22552767-22551689 (view UCSC Genome Browser custom track) |
| Alignm length: | 1080 |
| Alignm identity: | 739 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 394 |
| Conread position: | 188-1249 |
| Cow position: | chr17:22553102-22552025 (view UCSC Genome Browser custom track) |
| Alignm length: | 1079 |
| Alignm identity: | 704 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 723 |
| Conread position: | 191-1249 |
| Cow position: | chr17:22552595-22551521 (view UCSC Genome Browser custom track) |
| Alignm length: | 1077 |
| Alignm identity: | 702 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 226 |
| Conread position: | 202-1277 |
| Cow position: | chr17:22590254-22589165 (view UCSC Genome Browser custom track) |
| Alignm length: | 1098 |
| Alignm identity: | 696 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 294 |
| Conread position: | 248-963 |
| Cow position: | chr17:22452400-22451673 (view UCSC Genome Browser custom track) |
| Alignm length: | 732 |
| Alignm identity: | 486 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 139 |
| Conread position: | 255-956 |
| Cow position: | chr17:22473241-22473952 (view UCSC Genome Browser custom track) |
| Alignm length: | 716 |
| Alignm identity: | 472 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 152 |
| Conread position: | 255-1249 |
| Cow position: | chr17:22553191-22552193 (view UCSC Genome Browser custom track) |
| Alignm length: | 1001 |
| Alignm identity: | 665 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 822 |
| Conread position: | 280-695 |
| Cow position: | chr17:22498869-22498460 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 267 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 16, 191 |
| Conread position: | 280-1112 |
| Cow position: | chr17:22499373-22498538 (view UCSC Genome Browser custom track) |
| Alignm length: | 838 |
| Alignm identity: | 545 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 358 |
| Conread position: | 281-1173 |
| Cow position: | chr17:41441100-41440205 (view UCSC Genome Browser custom track) |
| Alignm length: | 900 |
| Alignm identity: | 503 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 36, 126 |
| Conread position: | 289-1202 |
| Cow position: | chr17:22499445-22498531 (view UCSC Genome Browser custom track) |
| Alignm length: | 916 |
| Alignm identity: | 579 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 32 |
| Conread position: | 320-1269 |
| Cow position: | chr17:22590289-22589340 (view UCSC Genome Browser custom track) |
| Alignm length: | 953 |
| Alignm identity: | 619 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 650, 660 |
| Conread position: | 375-1124 |
| Cow position: | chr17:22473205-22473952 (view UCSC Genome Browser custom track) |
| Alignm length: | 752 |
| Alignm identity: | 490 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 439, 60 |
| Conread position: | 399-1249 |
| Cow position: | chr17:22499419-22498568 (view UCSC Genome Browser custom track) |
| Alignm length: | 854 |
| Alignm identity: | 553 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 415, 404 |
| Conread position: | 415-1131 |
| Cow position: | chr17:22452389-22451673 (view UCSC Genome Browser custom track) |
| Alignm length: | 720 |
| Alignm identity: | 459 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 399, 390 |
| Conread position: | 476-1236 |
| Cow position: | chr17:22590301-22589540 (view UCSC Genome Browser custom track) |
| Alignm length: | 764 |
| Alignm identity: | 498 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 577, 593 |
| Conread position: | 480-1146 |
| Cow position: | chr17:22452408-22451742 (view UCSC Genome Browser custom track) |
| Alignm length: | 669 |
| Alignm identity: | 451 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 334, 328 |
| Conread position: | 486-1177 |
| Cow position: | chr17:22473232-22473920 (view UCSC Genome Browser custom track) |
| Alignm length: | 696 |
| Alignm identity: | 477 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 33 |
| Conread position: | 535-1249 |
| Cow position: | chr17:22452522-22451806 (view UCSC Genome Browser custom track) |
| Alignm length: | 721 |
| Alignm identity: | 416 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 111, 192 |
| Conread position: | 572-1174 |
| Cow position: | chr17:22452400-22451798 (view UCSC Genome Browser custom track) |
| Alignm length: | 606 |
| Alignm identity: | 401 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 317, 306 |
| Conread position: | 596-1176 |
| Cow position: | chr17:41441118-41440538 (view UCSC Genome Browser custom track) |
| Alignm length: | 585 |
| Alignm identity: | 340 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 245, 252 |
| Conread position: | 636-1188 |
| Cow position: | chr17:22590308-22589757 (view UCSC Genome Browser custom track) |
| Alignm length: | 554 |
| Alignm identity: | 373 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 334, 5 |
Show alignments to all cow chromosomes.