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Cow genome map

           
Conread name:
           
Ss1.1-rdbla0127_j23.5.5
        

               
Conread position:
               
1-85
               

               
Cow position:
               
chr18:41974631-41974715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
85
               

               
Alignm identity:
               
83
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
78-179
               

               
Cow position:
               
chr18:41982035-41982136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
102
               

               
Alignm identity:
               
86
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
170-784
               

               
Cow position:
               
chr18:51839409-51838779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
631
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
173-1249
               

               
Cow position:
               
chr18:50848154-50849247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
1099
               

               
Alignm identity:
               
686
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 103
               

               
Conread position:
               
174-1039
               

               
Cow position:
               
chr18:51752348-51751470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
888
               

               
Alignm identity:
               
562
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 41
               

               
Conread position:
               
176-719
               

               
Cow position:
               
chr18:51969499-51970047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
559
               

               
Alignm identity:
               
362
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 306
               

               
Conread position:
               
176-849
               

               
Cow position:
               
chr18:40075013-40075702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
691
               

               
Alignm identity:
               
429
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 646
               

               
Conread position:
               
176-1248
               

               
Cow position:
               
chr18:50099049-50100138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
1096
               

               
Alignm identity:
               
693
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 245
               

               
Conread position:
               
176-1249
               

               
Cow position:
               
chr18:42791038-42792128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
1095
               

               
Alignm identity:
               
711
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 821
               

               
Conread position:
               
176-1269
               

               
Cow position:
               
chr18:54979718-54980826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
1120
               

               
Alignm identity:
               
699
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 214
               

               
Conread position:
               
177-1235
               

               
Cow position:
               
chr18:53559668-53560740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
1080
               

               
Alignm identity:
               
691
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 19
               

               
Conread position:
               
178-1275
               

               
Cow position:
               
chr18:43093834-43092736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
1102
               

               
Alignm identity:
               
902
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 1050
               

               
Conread position:
               
179-654
               

               
Cow position:
               
chr18:51874217-51874709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
496
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
9, 143
               

               
Conread position:
               
179-775
               

               
Cow position:
               
chr18:42792301-42792913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
614
               

               
Alignm identity:
               
411
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 315
               

               
Conread position:
               
179-797
               

               
Cow position:
               
chr18:50250914-50251543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
639
               

               
Alignm identity:
               
395
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
66, 9
               

               
Conread position:
               
179-802
               

               
Cow position:
               
chr18:44153877-44153252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
643
               

               
Alignm identity:
               
397
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
10, 212
               

               
Conread position:
               
179-842
               

               
Cow position:
               
chr18:51765585-51764906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
683
               

               
Alignm identity:
               
435
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 51
               

               
Conread position:
               
179-876
               

               
Cow position:
               
chr18:44253478-44252789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
706
               

               
Alignm identity:
               
443
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 105
               

               
Conread position:
               
179-882
               

               
Cow position:
               
chr18:42960138-42959428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
723
               

               
Alignm identity:
               
467
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 145
               

               
Conread position:
               
179-966
               

               
Cow position:
               
chr18:40086269-40085463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
819
               

               
Alignm identity:
               
519
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 72
               

               
Conread position:
               
179-994
               

               
Cow position:
               
chr18:42675076-42674241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
843
               

               
Alignm identity:
               
531
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 137
               

               
Conread position:
               
179-1022
               

               
Cow position:
               
chr18:44398362-44397503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
862
               

               
Alignm identity:
               
583
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 314
               

               
Conread position:
               
179-1050
               

               
Cow position:
               
chr18:51969184-51970042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
880
               

               
Alignm identity:
               
562
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 64
               

               
Conread position:
               
179-1101
               

               
Cow position:
               
chr18:41197820-41198758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
939
               

               
Alignm identity:
               
685
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
179-1134
               

               
Cow position:
               
chr18:51368189-51367218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
976
               

               
Alignm identity:
               
607
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 380
               

               
Conread position:
               
179-1134
               

               
Cow position:
               
chr18:51765921-51764949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
979
               

               
Alignm identity:
               
616
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 223
               

               
Conread position:
               
179-1147
               

               
Cow position:
               
chr18:50848496-50849480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
990
               

               
Alignm identity:
               
634
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 8
               

               
Conread position:
               
179-1176
               

               
Cow position:
               
chr18:50848079-50849089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
1015
               

               
Alignm identity:
               
659
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 222
               

               
Conread position:
               
179-1176
               

               
Cow position:
               
chr18:50848412-50849425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
1015
               

               
Alignm identity:
               
639
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 778
               

               
Conread position:
               
179-1177
               

               
Cow position:
               
chr18:52432975-52433989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
1016
               

               
Alignm identity:
               
639
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 565
               

               
Conread position:
               
179-1187
               

               
Cow position:
               
chr18:41197736-41198760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
1029
               

               
Alignm identity:
               
720
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 45
               

               
Conread position:
               
179-1187
               

               
Cow position:
               
chr18:42791881-42792905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
1025
               

               
Alignm identity:
               
676
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
179-1188
               

               
Cow position:
               
chr18:50099304-50100329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
1032
               

               
Alignm identity:
               
656
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 483
               

               
Conread position:
               
179-1188
               

               
Cow position:
               
chr18:51368357-51367333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
1029
               

               
Alignm identity:
               
650
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 51
               

               
Conread position:
               
179-1188
               

               
Cow position:
               
chr18:52427710-52428735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
1028
               

               
Alignm identity:
               
658
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 316
               

               
Conread position:
               
179-1189
               

               
Cow position:
               
chr18:42791377-42792403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
1028
               

               
Alignm identity:
               
675
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 315
               

               
Conread position:
               
179-1223
               

               
Cow position:
               
chr18:51789732-51788671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
1066
               

               
Alignm identity:
               
687
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 246
               

               
Conread position:
               
179-1251
               

               
Cow position:
               
chr18:42791209-42792298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
1093
               

               
Alignm identity:
               
706
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 145
               

               
Conread position:
               
180-686
               

               
Cow position:
               
chr18:43168038-43168558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
524
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 315
               

               
Conread position:
               
180-792
               

               
Cow position:
               
chr18:50021986-50021356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
639
               

               
Alignm identity:
               
409
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 299
               

               
Conread position:
               
180-965
               

               
Cow position:
               
chr18:43120245-43119445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
807
               

               
Alignm identity:
               
522
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 239
               

               
Conread position:
               
180-1081
               

               
Cow position:
               
chr18:51812806-51811891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
920
               

               
Alignm identity:
               
585
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 317
               

               
Conread position:
               
180-1137
               

               
Cow position:
               
chr18:51969101-51970045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
968
               

               
Alignm identity:
               
623
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 182
               

               
Conread position:
               
180-1213
               

               
Cow position:
               
chr18:51812974-51811924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
1052
               

               
Alignm identity:
               
669
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 973
               

               
Conread position:
               
182-1089
               

               
Cow position:
               
chr18:44398445-44397520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
930
               

               
Alignm identity:
               
640
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 392
               

               
Conread position:
               
183-872
               

               
Cow position:
               
chr18:56493839-56494543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
711
               

               
Alignm identity:
               
456
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 43
               

               
Conread position:
               
186-1165
               

               
Cow position:
               
chr18:49021487-49022467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
999
               

               
Alignm identity:
               
571
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
54, 641
               

               
Conread position:
               
186-1251
               

               
Cow position:
               
chr18:50059622-50058541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
1086
               

               
Alignm identity:
               
684
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 409
               

               
Conread position:
               
187-465
               

               
Cow position:
               
chr18:42744127-42743834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
187-507
               

               
Cow position:
               
chr18:56329177-56328842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
61, 224
               

               
Conread position:
               
187-600
               

               
Cow position:
               
chr18:53635286-53634860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
62, 253
               

               
Conread position:
               
187-682
               

               
Cow position:
               
chr18:40075193-40075703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
514
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
31, 38
               

               
Conread position:
               
187-714
               

               
Cow position:
               
chr18:50030980-50030436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
548
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
62, 44
               

               
Conread position:
               
187-802
               

               
Cow position:
               
chr18:51969427-51970046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
631
               

               
Alignm identity:
               
389
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
49, 187
               

               
Conread position:
               
187-845
               

               
Cow position:
               
chr18:40306675-40307348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
674
               

               
Alignm identity:
               
421
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
187-858
               

               
Cow position:
               
chr18:42792226-42792912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
688
               

               
Alignm identity:
               
474
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 643
               

               
Conread position:
               
187-882
               

               
Cow position:
               
chr18:51838784-51838084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
714
               

               
Alignm identity:
               
423
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
34, 199
               

               
Conread position:
               
187-882
               

               
Cow position:
               
chr18:53560096-53560802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
714
               

               
Alignm identity:
               
450
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 38
               

               
Conread position:
               
187-966
               

               
Cow position:
               
chr18:40324714-40323921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
798
               

               
Alignm identity:
               
522
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 466
               

               
Conread position:
               
187-966
               

               
Cow position:
               
chr18:42837934-42837140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
795
               

               
Alignm identity:
               
529
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
187-1057
               

               
Cow position:
               
chr18:50099733-50100602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
891
               

               
Alignm identity:
               
561
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 223
               

               
Conread position:
               
187-1134
               

               
Cow position:
               
chr18:54992738-54993700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
969
               

               
Alignm identity:
               
620
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 34
               

               
Conread position:
               
187-1137
               

               
Cow position:
               
chr18:33064600-33063635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
972
               

               
Alignm identity:
               
632
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 65
               

               
Conread position:
               
187-1176
               

               
Cow position:
               
chr18:42791722-42792726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
1007
               

               
Alignm identity:
               
659
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 306
               

               
Conread position:
               
187-1189
               

               
Cow position:
               
chr18:42791638-42792655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
1022
               

               
Alignm identity:
               
659
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 225
               

               
Conread position:
               
187-1211
               

               
Cow position:
               
chr18:53636042-53635003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
1043
               

               
Alignm identity:
               
658
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 44
               

               
Conread position:
               
187-1218
               

               
Cow position:
               
chr18:41197577-41198624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
1048
               

               
Alignm identity:
               
731
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
187-1219
               

               
Cow position:
               
chr18:56248157-56247109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
1061
               

               
Alignm identity:
               
674
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 251
               

               
Conread position:
               
187-1249
               

               
Cow position:
               
chr18:49033296-49032218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
1084
               

               
Alignm identity:
               
684
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 385
               

               
Conread position:
               
187-1251
               

               
Cow position:
               
chr18:49033212-49032132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
1081
               

               
Alignm identity:
               
690
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
187-1251
               

               
Cow position:
               
chr18:50059453-50058375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
1084
               

               
Alignm identity:
               
695
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 812
               

               
Conread position:
               
187-1255
               

               
Cow position:
               
chr18:49033128-49032042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
1089
               

               
Alignm identity:
               
702
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 485
               

               
Conread position:
               
187-1271
               

               
Cow position:
               
chr18:42791470-42792569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
1103
               

               
Alignm identity:
               
705
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 308
               

               
Conread position:
               
187-1280
               

               
Cow position:
               
chr18:51368432-51367325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
1113
               

               
Alignm identity:
               
675
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 127
               

               
Conread position:
               
187-1352
               

               
Cow position:
               
chr18:42985558-42984390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
1190
               

               
Alignm identity:
               
786
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 35
               

               
Conread position:
               
188-539
               

               
Cow position:
               
chr18:52448035-52448403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
59, 297
               

               
Conread position:
               
188-599
               

               
Cow position:
               
chr18:14453285-14452859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
52, 43
               

               
Conread position:
               
188-648
               

               
Cow position:
               
chr18:42959876-42959410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
52, 301
               

               
Conread position:
               
188-651
               

               
Cow position:
               
chr18:42827491-42827974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
188-681
               

               
Cow position:
               
chr18:43048725-43048221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
511
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
50, 407
               

               
Conread position:
               
188-758
               

               
Cow position:
               
chr18:44240264-44240849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
586
               

               
Alignm identity:
               
372
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
188-802
               

               
Cow position:
               
chr18:43120068-43119439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
633
               

               
Alignm identity:
               
406
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 230
               

               
Conread position:
               
188-804
               

               
Cow position:
               
chr18:51367843-51367213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
633
               

               
Alignm identity:
               
399
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 33
               

               
Conread position:
               
188-805
               

               
Cow position:
               
chr18:51874066-51874691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
627
               

               
Alignm identity:
               
399
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 370
               

               
Conread position:
               
188-844
               

               
Cow position:
               
chr18:42837765-42837094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
677
               

               
Alignm identity:
               
447
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 64
               

               
Conread position:
               
188-904
               

               
Cow position:
               
chr18:33064179-33063452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
734
               

               
Alignm identity:
               
464
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 310
               

               
Conread position:
               
188-994
               

               
Cow position:
               
chr18:50848674-50849495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
825
               

               
Alignm identity:
               
516
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 306
               

               
Conread position:
               
188-1026
               

               
Cow position:
               
chr18:44184799-44183946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
857
               

               
Alignm identity:
               
565
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 313
               

               
Conread position:
               
188-1027
               

               
Cow position:
               
chr18:56329680-56328826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
856
               

               
Alignm identity:
               
541
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 299
               

               
Conread position:
               
188-1047
               

               
Cow position:
               
chr18:52012439-52011566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
881
               

               
Alignm identity:
               
554
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 379
               

               
Conread position:
               
188-1050
               

               
Cow position:
               
chr18:40086511-40085643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
881
               

               
Alignm identity:
               
563
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 295
               

               
Conread position:
               
188-1113
               

               
Cow position:
               
chr18:52428056-52428996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
944
               

               
Alignm identity:
               
604
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 126
               

               
Conread position:
               
188-1113
               

               
Cow position:
               
chr18:52433237-52434177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
945
               

               
Alignm identity:
               
607
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 126
               

               
Conread position:
               
188-1123
               

               
Cow position:
               
chr18:44154196-44153267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
953
               

               
Alignm identity:
               
607
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 216
               

               
Conread position:
               
188-1134
               

               
Cow position:
               
chr18:44253636-44252699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
967
               

               
Alignm identity:
               
600
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 148
               

               
Conread position:
               
188-1134
               

               
Cow position:
               
chr18:56128292-56129252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
964
               

               
Alignm identity:
               
600
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 305
               

               
Conread position:
               
188-1135
               

               
Cow position:
               
chr18:33064767-33063805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
967
               

               
Alignm identity:
               
633
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 467
               

               
Conread position:
               
188-1175
               

               
Cow position:
               
chr18:44239844-44240846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
1009
               

               
Alignm identity:
               
655
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 120
               

               
Conread position:
               
188-1176
               

               
Cow position:
               
chr18:40306340-40307343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
1005
               

               
Alignm identity:
               
645
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 384
               

               
Conread position:
               
188-1177
               

               
Cow position:
               
chr18:49033043-49032039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
1007
               

               
Alignm identity:
               
633
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 37
               

               
Conread position:
               
188-1188
               

               
Cow position:
               
chr18:33064851-33063836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
1023
               

               
Alignm identity:
               
663
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 232
               

               
Conread position:
               
188-1188
               

               
Cow position:
               
chr18:43023068-43022053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
1017
               

               
Alignm identity:
               
663
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 548
               

               
Conread position:
               
188-1188
               

               
Cow position:
               
chr18:52427972-52428987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
1020
               

               
Alignm identity:
               
654
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 461
               

               
Conread position:
               
188-1188
               

               
Cow position:
               
chr18:52433153-52434168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
1018
               

               
Alignm identity:
               
647
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 966
               

               
Conread position:
               
188-1188
               

               
Cow position:
               
chr18:56330016-56329001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
1018
               

               
Alignm identity:
               
641
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 222
               

               
Conread position:
               
188-1189
               

               
Cow position:
               
chr18:52447111-52448127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
1019
               

               
Alignm identity:
               
676
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 248
               

               
Conread position:
               
188-1195
               

               
Cow position:
               
chr18:43022984-43021964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
1028
               

               
Alignm identity:
               
675
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 305
               

               
Conread position:
               
188-1207
               

               
Cow position:
               
chr18:44253720-44252712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
1041
               

               
Alignm identity:
               
658
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 203
               

               
Conread position:
               
188-1218
               

               
Cow position:
               
chr18:41197662-41198708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
1047
               

               
Alignm identity:
               
716
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
188-1228
               

               
Cow position:
               
chr18:33064935-33063879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
1062
               

               
Alignm identity:
               
696
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 310
               

               
Conread position:
               
189-616
               

               
Cow position:
               
chr18:56247476-56247042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
60, 14
               

               
Conread position:
               
189-643
               

               
Cow position:
               
chr18:51969597-51970055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
46, 17
               

               
Conread position:
               
189-862
               

               
Cow position:
               
chr18:14454016-14453325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
696
               

               
Alignm identity:
               
430
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 295
               

               
Conread position:
               
189-946
               

               
Cow position:
               
chr18:55067106-55066334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
778
               

               
Alignm identity:
               
497
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 147
               

               
Conread position:
               
189-1050
               

               
Cow position:
               
chr18:43120403-43119527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
883
               

               
Alignm identity:
               
586
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 133
               

               
Conread position:
               
189-1176
               

               
Cow position:
               
chr18:49033378-49032376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
1003
               

               
Alignm identity:
               
637
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
189-1249
               

               
Cow position:
               
chr18:42694044-42692968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
1081
               

               
Alignm identity:
               
645
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 817
               

               
Conread position:
               
189-1249
               

               
Cow position:
               
chr18:43120646-43119579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
1081
               

               
Alignm identity:
               
673
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 215
               

               
Conread position:
               
190-952
               

               
Cow position:
               
chr18:40324207-40323451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
782
               

               
Alignm identity:
               
479
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
61, 263
               

               
Conread position:
               
190-966
               

               
Cow position:
               
chr18:33093101-33092316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
796
               

               
Alignm identity:
               
493
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 291
               

               
Conread position:
               
191-526
               

               
Cow position:
               
chr18:43174846-43174496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
48, 305
               

               
Conread position:
               
191-1188
               

               
Cow position:
               
chr18:40306175-40307187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
1017
               

               
Alignm identity:
               
663
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 378
               

               
Conread position:
               
197-1166
               

               
Cow position:
               
chr18:55523320-55524304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
989
               

               
Alignm identity:
               
620
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 138
               

               
Conread position:
               
200-1189
               

               
Cow position:
               
chr18:51765983-51764979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
1012
               

               
Alignm identity:
               
638
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 216
               

               
Conread position:
               
201-908
               

               
Cow position:
               
chr18:50295204-50295924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
725
               

               
Alignm identity:
               
463
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 111
               

               
Conread position:
               
201-947
               

               
Cow position:
               
chr18:1417850-1418611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
764
               

               
Alignm identity:
               
503
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 319
               

               
Conread position:
               
201-1236
               

               
Cow position:
               
chr18:41949332-41948283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
1051
               

               
Alignm identity:
               
679
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 1009
               

               
Conread position:
               
210-1051
               

               
Cow position:
               
chr18:54967648-54968499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
858
               

               
Alignm identity:
               
527
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 19
               

               
Conread position:
               
233-1189
               

               
Cow position:
               
chr18:42790932-42791899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
969
               

               
Alignm identity:
               
613
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 15
               

               
Conread position:
               
236-797
               

               
Cow position:
               
chr18:22634609-22635183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
576
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
14, 146
               

               
Conread position:
               
237-1273
               

               
Cow position:
               
chr18:43175553-43174504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
1055
               

               
Alignm identity:
               
695
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 247
               

               
Conread position:
               
247-876
               

               
Cow position:
               
chr18:56434278-56434919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
644
               

               
Alignm identity:
               
378
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
37, 340
               

               
Conread position:
               
247-1219
               

               
Cow position:
               
chr18:51839244-51838245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
1007
               

               
Alignm identity:
               
578
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 589
               

               
Conread position:
               
248-1177
               

               
Cow position:
               
chr18:44184904-44183963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
948
               

               
Alignm identity:
               
612
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 161
               

               
Conread position:
               
249-1279
               

               
Cow position:
               
chr18:44239740-44240782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
1049
               

               
Alignm identity:
               
672
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 241
               

               
Conread position:
               
250-1279
               

               
Cow position:
               
chr18:44154470-44153445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
1049
               

               
Alignm identity:
               
664
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 160
               

               
Conread position:
               
262-1188
               

               
Cow position:
               
chr18:42960546-42959626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
942
               

               
Alignm identity:
               
596
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 52
               

               
Conread position:
               
271-1174
               

               
Cow position:
               
chr18:44398425-44397519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
910
               

               
Alignm identity:
               
614
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 210
               

               
Conread position:
               
277-1177
               

               
Cow position:
               
chr18:52427569-52428472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
907
               

               
Alignm identity:
               
582
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 364
               

               
Conread position:
               
277-1177
               

               
Cow position:
               
chr18:52432918-52433821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
905
               

               
Alignm identity:
               
580
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 365
               

               
Conread position:
               
279-681
               

               
Cow position:
               
chr18:50281948-50282353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
279-687
               

               
Cow position:
               
chr18:54968144-54968555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
42, 196
               

               
Conread position:
               
279-882
               

               
Cow position:
               
chr18:50250941-50251543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
611
               

               
Alignm identity:
               
381
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 105
               

               
Conread position:
               
279-888
               

               
Cow position:
               
chr18:51839455-51838843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
613
               

               
Alignm identity:
               
378
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
279-921
               

               
Cow position:
               
chr18:50022042-50021394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
653
               

               
Alignm identity:
               
411
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 14
               

               
Conread position:
               
279-975
               

               
Cow position:
               
chr18:50271483-50272180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
701
               

               
Alignm identity:
               
462
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 201
               

               
Conread position:
               
279-1022
               

               
Cow position:
               
chr18:50031044-50030301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
755
               

               
Alignm identity:
               
470
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 21
               

               
Conread position:
               
279-1050
               

               
Cow position:
               
chr18:53498159-53498938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
793
               

               
Alignm identity:
               
515
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 214
               

               
Conread position:
               
279-1090
               

               
Cow position:
               
chr18:40074880-40075691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
815
               

               
Alignm identity:
               
504
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
279, 274
               

               
Conread position:
               
279-1091
               

               
Cow position:
               
chr18:50246015-50246830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
820
               

               
Alignm identity:
               
537
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 299
               

               
Conread position:
               
279-1117
               

               
Cow position:
               
chr18:55523498-55524339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
845
               

               
Alignm identity:
               
528
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 45
               

               
Conread position:
               
279-1147
               

               
Cow position:
               
chr18:50083388-50084259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
872
               

               
Alignm identity:
               
551
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
279-1176
               

               
Cow position:
               
chr18:56329829-56328929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
902
               

               
Alignm identity:
               
579
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 205
               

               
Conread position:
               
279-1177
               

               
Cow position:
               
chr18:53559864-53560765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
908
               

               
Alignm identity:
               
573
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 121
               

               
Conread position:
               
279-1177
               

               
Cow position:
               
chr18:54993010-54993911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
905
               

               
Alignm identity:
               
560
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 213
               

               
Conread position:
               
279-1184
               

               
Cow position:
               
chr18:54967645-54968548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
914
               

               
Alignm identity:
               
551
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 24
               

               
Conread position:
               
279-1189
               

               
Cow position:
               
chr18:50099249-50100162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
925
               

               
Alignm identity:
               
601
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 120
               

               
Conread position:
               
279-1189
               

               
Cow position:
               
chr18:53586977-53586064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
915
               

               
Alignm identity:
               
573
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 536
               

               
Conread position:
               
279-1189
               

               
Cow position:
               
chr18:54992926-54993839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
921
               

               
Alignm identity:
               
573
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 113
               

               
Conread position:
               
279-1189
               

               
Cow position:
               
chr18:56433909-56434811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
924
               

               
Alignm identity:
               
570
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 45
               

               
Conread position:
               
279-1217
               

               
Cow position:
               
chr18:50098997-50099939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
951
               

               
Alignm identity:
               
628
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 207
               

               
Conread position:
               
280-765
               

               
Cow position:
               
chr18:42827427-42827915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
280-807
               

               
Cow position:
               
chr18:51839370-51838840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
532
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 195
               

               
Conread position:
               
280-882
               

               
Cow position:
               
chr18:49022669-49023274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
608
               

               
Alignm identity:
               
376
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 24
               

               
Conread position:
               
280-934
               

               
Cow position:
               
chr18:14453997-14453340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
664
               

               
Alignm identity:
               
422
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 200
               

               
Conread position:
               
280-961
               

               
Cow position:
               
chr18:55067087-55066403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
690
               

               
Alignm identity:
               
447
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 30
               

               
Conread position:
               
280-970
               

               
Cow position:
               
chr18:49032687-49031994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
697
               

               
Alignm identity:
               
450
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 379
               

               
Conread position:
               
280-1051
               

               
Cow position:
               
chr18:55008582-55009354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
784
               

               
Alignm identity:
               
500
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 120
               

               
Conread position:
               
280-1070
               

               
Cow position:
               
chr18:50083473-50084266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
796
               

               
Alignm identity:
               
521
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 24
               

               
Conread position:
               
280-1134
               

               
Cow position:
               
chr18:56434077-56434925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
862
               

               
Alignm identity:
               
525
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 19
               

               
Conread position:
               
280-1137
               

               
Cow position:
               
chr18:51839118-51838244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
881
               

               
Alignm identity:
               
503
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 528
               

               
Conread position:
               
280-1146
               

               
Cow position:
               
chr18:50049204-50048331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
874
               

               
Alignm identity:
               
560
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
280-1161
               

               
Cow position:
               
chr18:56128144-56129028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
886
               

               
Alignm identity:
               
549
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 691
               

               
Conread position:
               
280-1167
               

               
Cow position:
               
chr18:53586892-53586002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
898
               

               
Alignm identity:
               
578
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 22
               

               
Conread position:
               
280-1175
               

               
Cow position:
               
chr18:53636105-53635207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
901
               

               
Alignm identity:
               
564
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 133
               

               
Conread position:
               
280-1175
               

               
Cow position:
               
chr18:55017903-55018802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
906
               

               
Alignm identity:
               
574
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 120
               

               
Conread position:
               
280-1176
               

               
Cow position:
               
chr18:50083305-50084204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
902
               

               
Alignm identity:
               
596
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 99
               

               
Conread position:
               
280-1189
               

               
Cow position:
               
chr18:41949325-41948413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
914
               

               
Alignm identity:
               
615
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 204
               

               
Conread position:
               
280-1217
               

               
Cow position:
               
chr18:40324861-40323921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
946
               

               
Alignm identity:
               
630
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 252
               

               
Conread position:
               
280-1249
               

               
Cow position:
               
chr18:50059264-50058298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
978
               

               
Alignm identity:
               
629
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 20
               

               
Conread position:
               
280-1269
               

               
Cow position:
               
chr18:42675547-42674557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
998
               

               
Alignm identity:
               
650
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 9
               

               
Conread position:
               
281-523
               

               
Cow position:
               
chr18:43053435-43053190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
36, 200
               

               
Conread position:
               
281-749
               

               
Cow position:
               
chr18:50281866-50282337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
281-851
               

               
Cow position:
               
chr18:42693520-42692947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
577
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
13, 19
               

               
Conread position:
               
281-858
               

               
Cow position:
               
chr18:55018324-55018903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
588
               

               
Alignm identity:
               
363
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
31, 23
               

               
Conread position:
               
281-882
               

               
Cow position:
               
chr18:53525884-53526486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
608
               

               
Alignm identity:
               
392
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 197
               

               
Conread position:
               
281-934
               

               
Cow position:
               
chr18:40075047-40075703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
661
               

               
Alignm identity:
               
415
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 297
               

               
Conread position:
               
281-1020
               

               
Cow position:
               
chr18:50295212-50295949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
744
               

               
Alignm identity:
               
450
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 528
               

               
Conread position:
               
281-1043
               

               
Cow position:
               
chr18:53610443-53609679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
768
               

               
Alignm identity:
               
471
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 194
               

               
Conread position:
               
281-1085
               

               
Cow position:
               
chr18:50022211-50021398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
822
               

               
Alignm identity:
               
527
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 204
               

               
Conread position:
               
281-1175
               

               
Cow position:
               
chr18:56128229-56129126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
903
               

               
Alignm identity:
               
565
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 127
               

               
Conread position:
               
281-1177
               

               
Cow position:
               
chr18:53587059-53586160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
906
               

               
Alignm identity:
               
586
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 190
               

               
Conread position:
               
281-1177
               

               
Cow position:
               
chr18:55523332-55524231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
906
               

               
Alignm identity:
               
570
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 197
               

               
Conread position:
               
281-1177
               

               
Cow position:
               
chr18:56329743-56328844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
902
               

               
Alignm identity:
               
579
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 194
               

               
Conread position:
               
281-1189
               

               
Cow position:
               
chr18:44253867-44252970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
915
               

               
Alignm identity:
               
603
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 200
               

               
Conread position:
               
281-1189
               

               
Cow position:
               
chr18:49033358-49032447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
914
               

               
Alignm identity:
               
578
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 132
               

               
Conread position:
               
281-1213
               

               
Cow position:
               
chr18:40306193-40307128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
941
               

               
Alignm identity:
               
585
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 119
               

               
Conread position:
               
281-1227
               

               
Cow position:
               
chr18:43094053-43093117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
952
               

               
Alignm identity:
               
667
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 27
               

               
Conread position:
               
281-1247
               

               
Cow position:
               
chr18:50848359-50849329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
974
               

               
Alignm identity:
               
618
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 122
               

               
Conread position:
               
281-1262
               

               
Cow position:
               
chr18:43023047-43022063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
990
               

               
Alignm identity:
               
642
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 33
               

               
Conread position:
               
281-1262
               

               
Cow position:
               
chr18:43175818-43174852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
987
               

               
Alignm identity:
               
630
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 30
               

               
Conread position:
               
282-1022
               

               
Cow position:
               
chr18:1417859-1418602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
749
               

               
Alignm identity:
               
498
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 42
               

               
Conread position:
               
282-1138
               

               
Cow position:
               
chr18:54993097-54993955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
869
               

               
Alignm identity:
               
556
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 96
               

               
Conread position:
               
282-1176
               

               
Cow position:
               
chr18:49022253-49023148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
904
               

               
Alignm identity:
               
552
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 29
               

               
Conread position:
               
282-1186
               

               
Cow position:
               
chr18:42744692-42743785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
911
               

               
Alignm identity:
               
623
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 378
               

               
Conread position:
               
282-1189
               

               
Cow position:
               
chr18:54992677-54993587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
914
               

               
Alignm identity:
               
559
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 186
               

               
Conread position:
               
282-1253
               

               
Cow position:
               
chr18:44253946-44252988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
978
               

               
Alignm identity:
               
620
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 27
               

               
Conread position:
               
283-1095
               

               
Cow position:
               
chr18:56329657-56328842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
816
               

               
Alignm identity:
               
514
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
284-1186
               

               
Cow position:
               
chr18:51400307-51401212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
910
               

               
Alignm identity:
               
577
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 19
               

               
Conread position:
               
284-1321
               

               
Cow position:
               
chr18:52447387-52448432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
1051
               

               
Alignm identity:
               
698
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 291
               

               
Conread position:
               
285-1021
               

               
Cow position:
               
chr18:56265359-56264624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
764
               

               
Alignm identity:
               
460
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
24, 17
               

               
Conread position:
               
285-1279
               

               
Cow position:
               
chr18:51789865-51788868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
1001
               

               
Alignm identity:
               
625
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 18
               

               
Conread position:
               
286-1173
               

               
Cow position:
               
chr18:43167653-43168543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
893
               

               
Alignm identity:
               
582
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 136
               

               
Conread position:
               
288-1173
               

               
Cow position:
               
chr18:53587137-53586248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
898
               

               
Alignm identity:
               
577
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 24
               

               
Conread position:
               
290-1271
               

               
Cow position:
               
chr18:50059674-50058690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
989
               

               
Alignm identity:
               
634
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 326
               

               
Conread position:
               
290-1279
               

               
Cow position:
               
chr18:51813018-51812027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
997
               

               
Alignm identity:
               
638
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 12
               

               
Conread position:
               
303-1273
               

               
Cow position:
               
chr18:41197539-41198511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
978
               

               
Alignm identity:
               
672
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 514
               

               
Conread position:
               
311-964
               

               
Cow position:
               
chr18:52012216-52011565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
659
               

               
Alignm identity:
               
418
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
264, 5
               

               
Conread position:
               
312-1134
               

               
Cow position:
               
chr18:55017770-55018592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
825
               

               
Alignm identity:
               
520
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
503, 492
               

               
Conread position:
               
314-1025
               

               
Cow position:
               
chr18:56247753-56247054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
715
               

               
Alignm identity:
               
464
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
164, 152
               

               
Conread position:
               
314-1142
               

               
Cow position:
               
chr18:55008454-55009279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
836
               

               
Alignm identity:
               
529
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 6
               

               
Conread position:
               
314-1188
               

               
Cow position:
               
chr18:53498030-53498907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
890
               

               
Alignm identity:
               
560
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
162, 6
               

               
Conread position:
               
314-1211
               

               
Cow position:
               
chr18:52012464-52011569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
905
               

               
Alignm identity:
               
556
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 6
               

               
Conread position:
               
315-1101
               

               
Cow position:
               
chr18:43167769-43168553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
788
               

               
Alignm identity:
               
509
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
159, 163
               

               
Conread position:
               
315-1167
               

               
Cow position:
               
chr18:56493648-56494504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
860
               

               
Alignm identity:
               
532
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 19
               

               
Conread position:
               
317-1212
               

               
Cow position:
               
chr18:51368539-51367645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
900
               

               
Alignm identity:
               
547
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
245, 233
               

               
Conread position:
               
319-988
               

               
Cow position:
               
chr18:51874044-51874706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
673
               

               
Alignm identity:
               
434
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
306, 115
               

               
Conread position:
               
319-1166
               

               
Cow position:
               
chr18:56330206-56329359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
850
               

               
Alignm identity:
               
550
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
157, 149
               

               
Conread position:
               
319-1208
               

               
Cow position:
               
chr18:51969172-51970030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
892
               

               
Alignm identity:
               
566
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
564, 76
               

               
Conread position:
               
319-1217
               

               
Cow position:
               
chr18:54966932-54967827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
901
               

               
Alignm identity:
               
533
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
581, 565
               

               
Conread position:
               
319-1237
               

               
Cow position:
               
chr18:50245806-50246725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
925
               

               
Alignm identity:
               
581
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 63
               

               
Conread position:
               
320-681
               

               
Cow position:
               
chr18:14453222-14452861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 58
               

               
Conread position:
               
320-702
               

               
Cow position:
               
chr18:42693310-42692928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
51, 59
               

               
Conread position:
               
320-870
               

               
Cow position:
               
chr18:53586429-53585879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
553
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
242, 232
               

               
Conread position:
               
320-877
               

               
Cow position:
               
chr18:53509472-53510027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
561
               

               
Alignm identity:
               
364
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
161, 155
               

               
Conread position:
               
320-969
               

               
Cow position:
               
chr18:22634540-22635186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
657
               

               
Alignm identity:
               
402
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 83
               

               
Conread position:
               
320-1114
               

               
Cow position:
               
chr18:43175290-43174496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
800
               

               
Alignm identity:
               
526
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
152, 158
               

               
Conread position:
               
320-1128
               

               
Cow position:
               
chr18:42837954-42837146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
811
               

               
Alignm identity:
               
542
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 159
               

               
Conread position:
               
320-1129
               

               
Cow position:
               
chr18:55017862-55018671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
811
               

               
Alignm identity:
               
517
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 76
               

               
Conread position:
               
320-1151
               

               
Cow position:
               
chr18:56316115-56316946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
836
               

               
Alignm identity:
               
508
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 76
               

               
Conread position:
               
320-1188
               

               
Cow position:
               
chr18:44184904-44184036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
873
               

               
Alignm identity:
               
577
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 161
               

               
Conread position:
               
320-1189
               

               
Cow position:
               
chr18:54979542-54980411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
874
               

               
Alignm identity:
               
552
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
331, 336
               

               
Conread position:
               
320-1197
               

               
Cow position:
               
chr18:42675255-42674379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
880
               

               
Alignm identity:
               
594
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
329, 316
               

               
Conread position:
               
320-1206
               

               
Cow position:
               
chr18:40086532-40085656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
893
               

               
Alignm identity:
               
591
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 62
               

               
Conread position:
               
320-1249
               

               
Cow position:
               
chr18:56329953-56329023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
933
               

               
Alignm identity:
               
582
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
158, 152
               

               
Conread position:
               
320-1253
               

               
Cow position:
               
chr18:33064872-33063937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
943
               

               
Alignm identity:
               
617
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
246, 233
               

               
Conread position:
               
320-1255
               

               
Cow position:
               
chr18:42790946-42791880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
942
               

               
Alignm identity:
               
607
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
155, 161
               

               
Conread position:
               
321-1125
               

               
Cow position:
               
chr18:53509222-53510023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
809
               

               
Alignm identity:
               
514
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
147, 9
               

               
Conread position:
               
321-1138
               

               
Cow position:
               
chr18:53525676-53526490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
823
               

               
Alignm identity:
               
512
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
143, 9
               

               
Conread position:
               
323-1030
               

               
Cow position:
               
chr18:14454035-14453325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
715
               

               
Alignm identity:
               
454
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
250, 230
               

               
Conread position:
               
323-1137
               

               
Cow position:
               
chr18:43120338-43119524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
818
               

               
Alignm identity:
               
539
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
310, 325
               

               
Conread position:
               
323-1188
               

               
Cow position:
               
chr18:43023086-43022221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
874
               

               
Alignm identity:
               
587
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 70
               

               
Conread position:
               
323-1212
               

               
Cow position:
               
chr18:42985575-42984685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
896
               

               
Alignm identity:
               
589
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
150, 155
               

               
Conread position:
               
323-1242
               

               
Cow position:
               
chr18:42960314-42959402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
927
               

               
Alignm identity:
               
599
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 64
               

               
Conread position:
               
323-1251
               

               
Cow position:
               
chr18:42675336-42674407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
933
               

               
Alignm identity:
               
632
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
150, 155
               

               
Conread position:
               
325-849
               

               
Cow position:
               
chr18:43048741-43048221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
528
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
153, 147
               

               
Conread position:
               
326-1222
               

               
Cow position:
               
chr18:40324895-40323999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
900
               

               
Alignm identity:
               
585
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
488, 11
               

               
Conread position:
               
326-1251
               

               
Cow position:
               
chr18:40086948-40086022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
939
               

               
Alignm identity:
               
618
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 72
               

               
Conread position:
               
328-1137
               

               
Cow position:
               
chr18:33065032-33064223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
815
               

               
Alignm identity:
               
522
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 153
               

               
Conread position:
               
328-1188
               

               
Cow position:
               
chr18:42744727-42743867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
862
               

               
Alignm identity:
               
580
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 73
               

               
Conread position:
               
331-1177
               

               
Cow position:
               
chr18:49033387-49032543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
849
               

               
Alignm identity:
               
556
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 15
               

               
Conread position:
               
335-1251
               

               
Cow position:
               
chr18:43167621-43168538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
919
               

               
Alignm identity:
               
598
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 82
               

               
Conread position:
               
337-869
               

               
Cow position:
               
chr18:14453289-14452756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
535
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
313, 320
               

               
Conread position:
               
337-975
               

               
Cow position:
               
chr18:42724590-42723951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
643
               

               
Alignm identity:
               
367
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
16, 333
               

               
Conread position:
               
337-1166
               

               
Cow position:
               
chr18:42694049-42693221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
836
               

               
Alignm identity:
               
515
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 141
               

               
Conread position:
               
337-1175
               

               
Cow position:
               
chr18:56128120-56128958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
842
               

               
Alignm identity:
               
515
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 62
               

               
Conread position:
               
337-1188
               

               
Cow position:
               
chr18:33065107-33064256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
859
               

               
Alignm identity:
               
543
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 32
               

               
Conread position:
               
337-1188
               

               
Cow position:
               
chr18:56248160-56247307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
864
               

               
Alignm identity:
               
548
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
303, 254
               

               
Conread position:
               
337-1249
               

               
Cow position:
               
chr18:41949349-41948436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
915
               

               
Alignm identity:
               
603
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
289, 299
               

               
Conread position:
               
338-1050
               

               
Cow position:
               
chr18:51838786-51838084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
718
               

               
Alignm identity:
               
428
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
136, 151
               

               
Conread position:
               
338-1223
               

               
Cow position:
               
chr18:50245993-50246876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
889
               

               
Alignm identity:
               
576
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 44
               

               
Conread position:
               
338-1273
               

               
Cow position:
               
chr18:50022490-50021545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
952
               

               
Alignm identity:
               
572
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 461
               

               
Conread position:
               
340-1194
               

               
Cow position:
               
chr18:40306170-40307025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
857
               

               
Alignm identity:
               
557
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 139
               

               
Conread position:
               
340-1249
               

               
Cow position:
               
chr18:42675405-42674493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
916
               

               
Alignm identity:
               
603
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 466
               

               
Conread position:
               
340-1271
               

               
Cow position:
               
chr18:53636126-53635195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
936
               

               
Alignm identity:
               
579
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 50
               

               
Conread position:
               
341-1056
               

               
Cow position:
               
chr18:50271464-50272179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
719
               

               
Alignm identity:
               
469
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
140, 124
               

               
Conread position:
               
341-1176
               

               
Cow position:
               
chr18:50049224-50048385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
844
               

               
Alignm identity:
               
533
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 276
               

               
Conread position:
               
343-882
               

               
Cow position:
               
chr18:42827410-42827953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
545
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
515, 14
               

               
Conread position:
               
343-1176
               

               
Cow position:
               
chr18:50083288-50084120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
838
               

               
Alignm identity:
               
545
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
548, 10
               

               
Conread position:
               
343-1269
               

               
Cow position:
               
chr18:41197496-41198423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
931
               

               
Alignm identity:
               
676
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 57
               

               
Conread position:
               
344-962
               

               
Cow position:
               
chr18:33093100-33092482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
625
               

               
Alignm identity:
               
413
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 61
               

               
Conread position:
               
346-1177
               

               
Cow position:
               
chr18:53610543-53609712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
836
               

               
Alignm identity:
               
513
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 38
               

               
Conread position:
               
349-606
               

               
Cow position:
               
chr18:43053448-43053191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
125, 132
               

               
Conread position:
               
353-1176
               

               
Cow position:
               
chr18:50245756-50246579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
830
               

               
Alignm identity:
               
513
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 128
               

               
Conread position:
               
355-1146
               

               
Cow position:
               
chr18:56433817-56434601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
798
               

               
Alignm identity:
               
488
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 107
               

               
Conread position:
               
356-883
               

               
Cow position:
               
chr18:55497688-55497161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
531
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
50, 44
               

               
Conread position:
               
356-1137
               

               
Cow position:
               
chr18:56316067-56316848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
787
               

               
Alignm identity:
               
488
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
222, 195
               

               
Conread position:
               
356-1177
               

               
Cow position:
               
chr18:44398421-44397600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
825
               

               
Alignm identity:
               
571
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
116, 122
               

               
Conread position:
               
356-1186
               

               
Cow position:
               
chr18:49022414-49023242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
832
               

               
Alignm identity:
               
520
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 121
               

               
Conread position:
               
356-1188
               

               
Cow position:
               
chr18:43120389-43119557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
835
               

               
Alignm identity:
               
530
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 15
               

               
Conread position:
               
356-1188
               

               
Cow position:
               
chr18:52433084-52433916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
834
               

               
Alignm identity:
               
535
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
213, 200
               

               
Conread position:
               
356-1190
               

               
Cow position:
               
chr18:51400298-51401132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
835
               

               
Alignm identity:
               
519
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
356-1255
               

               
Cow position:
               
chr18:51368585-51367684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
907
               

               
Alignm identity:
               
571
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 68
               

               
Conread position:
               
356-1279
               

               
Cow position:
               
chr18:52446958-52447881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
928
               

               
Alignm identity:
               
592
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 121
               

               
Conread position:
               
360-1176
               

               
Cow position:
               
chr18:49021088-49021901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
823
               

               
Alignm identity:
               
462
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
157, 344
               

               
Conread position:
               
362-1036
               

               
Cow position:
               
chr18:51839453-51838779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
676
               

               
Alignm identity:
               
392
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 38
               

               
Conread position:
               
362-1144
               

               
Cow position:
               
chr18:50098915-50099697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
786
               

               
Alignm identity:
               
500
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
511, 535
               

               
Conread position:
               
364-715
               

               
Cow position:
               
chr18:53598282-53597937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
296, 27
               

               
Conread position:
               
364-1019
               

               
Cow position:
               
chr18:50281700-50282355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
656
               

               
Alignm identity:
               
398
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
364-1045
               

               
Cow position:
               
chr18:55067084-55066403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
686
               

               
Alignm identity:
               
456
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 120
               

               
Conread position:
               
364-1134
               

               
Cow position:
               
chr18:56433411-56434169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
780
               

               
Alignm identity:
               
456
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
202, 30
               

               
Conread position:
               
364-1173
               

               
Cow position:
               
chr18:40074884-40075690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
814
               

               
Alignm identity:
               
513
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 43
               

               
Conread position:
               
364-1177
               

               
Cow position:
               
chr18:54966893-54967703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
819
               

               
Alignm identity:
               
525
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
198, 190
               

               
Conread position:
               
364-1177
               

               
Cow position:
               
chr18:54979418-54980231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
818
               

               
Alignm identity:
               
520
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 32
               

               
Conread position:
               
364-1249
               

               
Cow position:
               
chr18:42790906-42791792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
892
               

               
Alignm identity:
               
579
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 26
               

               
Conread position:
               
365-1050
               

               
Cow position:
               
chr18:50031123-50030436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
694
               

               
Alignm identity:
               
426
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
276, 185
               

               
Conread position:
               
365-1177
               

               
Cow position:
               
chr18:53587140-53586328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
819
               

               
Alignm identity:
               
510
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
277, 270
               

               
Conread position:
               
365-1269
               

               
Cow position:
               
chr18:52447387-52448291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
908
               

               
Alignm identity:
               
619
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
683, 691
               

               
Conread position:
               
366-1103
               

               
Cow position:
               
chr18:49022590-49023327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
742
               

               
Alignm identity:
               
448
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 30
               

               
Conread position:
               
366-1116
               

               
Cow position:
               
chr18:1417862-1418612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
755
               

               
Alignm identity:
               
519
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 113
               

               
Conread position:
               
369-1185
               

               
Cow position:
               
chr18:55008424-55009237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
823
               

               
Alignm identity:
               
521
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
193, 128
               

               
Conread position:
               
370-1134
               

               
Cow position:
               
chr18:55008341-55009103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
774
               

               
Alignm identity:
               
483
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
235, 207
               

               
Conread position:
               
371-1188
               

               
Cow position:
               
chr18:52427327-52428147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
829
               

               
Alignm identity:
               
514
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 70
               

               
Conread position:
               
372-1279
               

               
Cow position:
               
chr18:52446568-52447461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
922
               

               
Alignm identity:
               
564
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 68
               

               
Conread position:
               
374-1134
               

               
Cow position:
               
chr18:54966819-54967579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
768
               

               
Alignm identity:
               
480
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 98
               

               
Conread position:
               
374-1151
               

               
Cow position:
               
chr18:54979344-54980121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
785
               

               
Alignm identity:
               
499
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 92
               

               
Conread position:
               
374-1251
               

               
Cow position:
               
chr18:54992604-54993482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
880
               

               
Alignm identity:
               
547
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 98
               

               
Conread position:
               
375-1101
               

               
Cow position:
               
chr18:50281627-50282353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
727
               

               
Alignm identity:
               
444
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
375-1105
               

               
Cow position:
               
chr18:50271414-50272144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
735
               

               
Alignm identity:
               
490
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
197, 174
               

               
Conread position:
               
375-1189
               

               
Cow position:
               
chr18:50049276-50048456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
824
               

               
Alignm identity:
               
524
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 518
               

               
Conread position:
               
377-1152
               

               
Cow position:
               
chr18:44254100-44253330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
780
               

               
Alignm identity:
               
516
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 106
               

               
Conread position:
               
380-1189
               

               
Cow position:
               
chr18:56493632-56494443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
816
               

               
Alignm identity:
               
492
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
200, 27
               

               
Conread position:
               
382-1177
               

               
Cow position:
               
chr18:53498013-53498811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
808
               

               
Alignm identity:
               
507
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 99
               

               
Conread position:
               
385-1177
               

               
Cow position:
               
chr18:52432860-52433653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
797
               

               
Alignm identity:
               
516
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 424
               

               
Conread position:
               
386-1177
               

               
Cow position:
               
chr18:44398475-44397684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
795
               

               
Alignm identity:
               
553
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 36
               

               
Conread position:
               
389-1141
               

               
Cow position:
               
chr18:56248269-56247514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
770
               

               
Alignm identity:
               
503
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 21
               

               
Conread position:
               
389-1177
               

               
Cow position:
               
chr18:52446834-52447611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
789
               

               
Alignm identity:
               
491
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
389-1233
               

               
Cow position:
               
chr18:44154487-44153647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
852
               

               
Alignm identity:
               
555
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 89
               

               
Conread position:
               
389-1249
               

               
Cow position:
               
chr18:44184919-44184058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
867
               

               
Alignm identity:
               
579
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 89
               

               
Conread position:
               
394-1176
               

               
Cow position:
               
chr18:1417805-1418588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
786
               

               
Alignm identity:
               
524
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 85
               

               
Conread position:
               
394-1189
               

               
Cow position:
               
chr18:42985588-42984793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
804
               

               
Alignm identity:
               
541
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 89
               

               
Conread position:
               
395-1253
               

               
Cow position:
               
chr18:43167513-43168373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
865
               

               
Alignm identity:
               
545
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 86
               

               
Conread position:
               
398-1173
               

               
Cow position:
               
chr18:42790856-42791631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
781
               

               
Alignm identity:
               
508
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 82
               

               
Conread position:
               
398-1229
               

               
Cow position:
               
chr18:50059731-50058899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
835
               

               
Alignm identity:
               
543
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
476, 484
               

               
Conread position:
               
405-1140
               

               
Cow position:
               
chr18:40324982-40324250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
739
               

               
Alignm identity:
               
486
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 28
               

               
Conread position:
               
407-1177
               

               
Cow position:
               
chr18:53497957-53498727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
780
               

               
Alignm identity:
               
499
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
336, 56
               

               
Conread position:
               
408-1251
               

               
Cow position:
               
chr18:50848072-50848913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
849
               

               
Alignm identity:
               
539
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
177, 86
               

               
Conread position:
               
408-1264
               

               
Cow position:
               
chr18:43175856-43175015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
865
               

               
Alignm identity:
               
551
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
237, 65
               

               
Conread position:
               
412-858
               

               
Cow position:
               
chr18:14453298-14452852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 56
               

               
Conread position:
               
412-1177
               

               
Cow position:
               
chr18:55067120-55066355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
770
               

               
Alignm identity:
               
508
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
240, 245
               

               
Conread position:
               
413-1167
               

               
Cow position:
               
chr18:53509229-53509983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
757
               

               
Alignm identity:
               
482
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
403, 390
               

               
Conread position:
               
413-1222
               

               
Cow position:
               
chr18:53525683-53526491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
813
               

               
Alignm identity:
               
497
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
403, 390
               

               
Conread position:
               
414-864
               

               
Cow position:
               
chr18:51970332-51970774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
126, 44
               

               
Conread position:
               
414-1073
               

               
Cow position:
               
chr18:51874055-51874707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
663
               

               
Alignm identity:
               
423
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 75
               

               
Conread position:
               
414-1112
               

               
Cow position:
               
chr18:56247737-56247051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
702
               

               
Alignm identity:
               
473
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 52
               

               
Conread position:
               
414-1114
               

               
Cow position:
               
chr18:14454028-14453325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
705
               

               
Alignm identity:
               
449
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
402, 391
               

               
Conread position:
               
414-1177
               

               
Cow position:
               
chr18:52446932-52447695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
768
               

               
Alignm identity:
               
495
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
238, 242
               

               
Conread position:
               
414-1189
               

               
Cow position:
               
chr18:56434121-56434895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
783
               

               
Alignm identity:
               
501
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 52
               

               
Conread position:
               
414-1264
               

               
Cow position:
               
chr18:42744725-42743872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
857
               

               
Alignm identity:
               
593
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 70
               

               
Conread position:
               
415-1177
               

               
Cow position:
               
chr18:50083275-50084037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
767
               

               
Alignm identity:
               
489
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
140, 134
               

               
Conread position:
               
416-1120
               

               
Cow position:
               
chr18:51839483-51838779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
705
               

               
Alignm identity:
               
416
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
417-689
               

               
Cow position:
               
chr18:43053464-43053192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
418-1189
               

               
Cow position:
               
chr18:42837940-42837169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
776
               

               
Alignm identity:
               
525
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 135
               

               
Conread position:
               
418-1249
               

               
Cow position:
               
chr18:43094163-43093346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
836
               

               
Alignm identity:
               
547
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 55
               

               
Conread position:
               
421-1188
               

               
Cow position:
               
chr18:49033384-49032616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
772
               

               
Alignm identity:
               
496
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 62
               

               
Conread position:
               
422-1140
               

               
Cow position:
               
chr18:56128036-56128755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
721
               

               
Alignm identity:
               
440
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 371
               

               
Conread position:
               
422-1188
               

               
Cow position:
               
chr18:51766082-51765316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
770
               

               
Alignm identity:
               
481
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 59
               

               
Conread position:
               
423-1056
               

               
Cow position:
               
chr18:42724587-42723954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
634
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
423-1137
               

               
Cow position:
               
chr18:51838785-51838081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
718
               

               
Alignm identity:
               
423
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
283, 194
               

               
Conread position:
               
423-1138
               

               
Cow position:
               
chr18:42724839-42724124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
723
               

               
Alignm identity:
               
415
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
66, 50
               

               
Conread position:
               
423-1176
               

               
Cow position:
               
chr18:56316050-56316803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
755
               

               
Alignm identity:
               
462
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
711, 705
               

               
Conread position:
               
424-966
               

               
Cow position:
               
chr18:42827406-42827953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
549
               

               
Alignm identity:
               
383
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 57
               

               
Conread position:
               
424-1174
               

               
Cow position:
               
chr18:42694132-42693380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
757
               

               
Alignm identity:
               
471
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 59
               

               
Conread position:
               
424-1188
               

               
Cow position:
               
chr18:51969024-51969769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
770
               

               
Alignm identity:
               
493
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 151
               

               
Conread position:
               
425-1044
               

               
Cow position:
               
chr18:50250922-50251537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
624
               

               
Alignm identity:
               
405
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
296, 36
               

               
Conread position:
               
427-1046
               

               
Cow position:
               
chr18:33093101-33092482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
623
               

               
Alignm identity:
               
412
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
384, 393
               

               
Conread position:
               
429-1196
               

               
Cow position:
               
chr18:56247808-56247050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
772
               

               
Alignm identity:
               
503
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 45
               

               
Conread position:
               
430-733
               

               
Cow position:
               
chr18:51873708-51874011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
430-883
               

               
Cow position:
               
chr18:55497699-55497245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
11, 374
               

               
Conread position:
               
431-1128
               

               
Cow position:
               
chr18:56493853-56494547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
698
               

               
Alignm identity:
               
444
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
666, 0
               

               
Conread position:
               
431-1136
               

               
Cow position:
               
chr18:51752326-51751620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
711
               

               
Alignm identity:
               
466
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 47
               

               
Conread position:
               
431-1249
               

               
Cow position:
               
chr18:51813043-51812224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
824
               

               
Alignm identity:
               
522
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
200, 216
               

               
Conread position:
               
431-1278
               

               
Cow position:
               
chr18:51789884-51789037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
852
               

               
Alignm identity:
               
524
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
459, 469
               

               
Conread position:
               
435-1226
               

               
Cow position:
               
chr18:50098904-50099696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
798
               

               
Alignm identity:
               
513
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
453, 464
               

               
Conread position:
               
436-1135
               

               
Cow position:
               
chr18:50295202-50295900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
703
               

               
Alignm identity:
               
456
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
202, 197
               

               
Conread position:
               
438-1205
               

               
Cow position:
               
chr18:51839545-51838778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
769
               

               
Alignm identity:
               
445
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
376, 367
               

               
Conread position:
               
439-1189
               

               
Cow position:
               
chr18:51752234-51751488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
758
               

               
Alignm identity:
               
491
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 39
               

               
Conread position:
               
440-872
               

               
Cow position:
               
chr18:49021504-49021933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
300, 68
               

               
Conread position:
               
440-942
               

               
Cow position:
               
chr18:53571829-53572318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
506
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
243, 170
               

               
Conread position:
               
442-1221
               

               
Cow position:
               
chr18:51368666-51367886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
784
               

               
Alignm identity:
               
503
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 40
               

               
Conread position:
               
445-1252
               

               
Cow position:
               
chr18:50083221-50084029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
818
               

               
Alignm identity:
               
524
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 33
               

               
Conread position:
               
454-1195
               

               
Cow position:
               
chr18:50271409-50272150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
744
               

               
Alignm identity:
               
480
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 27
               

               
Conread position:
               
454-1249
               

               
Cow position:
               
chr18:44398490-44397695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
797
               

               
Alignm identity:
               
546
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
725, 24
               

               
Conread position:
               
455-1194
               

               
Cow position:
               
chr18:56433334-56434070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
749
               

               
Alignm identity:
               
451
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
70, 55
               

               
Conread position:
               
479-1212
               

               
Cow position:
               
chr18:40324992-40324261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
738
               

               
Alignm identity:
               
499
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
391, 75
               

               
Conread position:
               
480-942
               

               
Cow position:
               
chr18:14453314-14452852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 72
               

               
Conread position:
               
480-1173
               

               
Cow position:
               
chr18:50281648-50282341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
699
               

               
Alignm identity:
               
438
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 31
               

               
Conread position:
               
480-1176
               

               
Cow position:
               
chr18:50245715-50246411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
701
               

               
Alignm identity:
               
441
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
174, 153
               

               
Conread position:
               
480-1211
               

               
Cow position:
               
chr18:42837962-42837230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
733
               

               
Alignm identity:
               
496
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
710, 0
               

               
Conread position:
               
481-1249
               

               
Cow position:
               
chr18:43167437-43168200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
772
               

               
Alignm identity:
               
483
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
283, 55
               

               
Conread position:
               
482-1133
               

               
Cow position:
               
chr18:22634534-22635183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
662
               

               
Alignm identity:
               
419
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 79
               

               
Conread position:
               
483-1189
               

               
Cow position:
               
chr18:40086959-40086251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
715
               

               
Alignm identity:
               
459
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 69
               

               
Conread position:
               
483-1258
               

               
Cow position:
               
chr18:50022513-50021732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
787
               

               
Alignm identity:
               
494
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 91
               

               
Conread position:
               
484-1177
               

               
Cow position:
               
chr18:14454042-14453349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
695
               

               
Alignm identity:
               
437
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
168, 173
               

               
Conread position:
               
484-1250
               

               
Cow position:
               
chr18:42790858-42791625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
773
               

               
Alignm identity:
               
501
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 88
               

               
Conread position:
               
487-1247
               

               
Cow position:
               
chr18:41949367-41948606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
763
               

               
Alignm identity:
               
513
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
561, 568
               

               
Conread position:
               
487-1249
               

               
Cow position:
               
chr18:43023090-43022327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
769
               

               
Alignm identity:
               
503
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
302, 326
               

               
Conread position:
               
488-1141
               

               
Cow position:
               
chr18:51874045-51874691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
655
               

               
Alignm identity:
               
424
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
625, 114
               

               
Conread position:
               
488-1176
               

               
Cow position:
               
chr18:56330205-56329517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
691
               

               
Alignm identity:
               
432
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
140, 149
               

               
Conread position:
               
490-1177
               

               
Cow position:
               
chr18:33065122-33064435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
693
               

               
Alignm identity:
               
444
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 47
               

               
Conread position:
               
490-1279
               

               
Cow position:
               
chr18:51400264-51401053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
793
               

               
Alignm identity:
               
491
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
484, 500
               

               
Conread position:
               
491-1249
               

               
Cow position:
               
chr18:42694147-42693388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
765
               

               
Alignm identity:
               
458
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 23
               

               
Conread position:
               
492-1177
               

               
Cow position:
               
chr18:50848072-50848754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
688
               

               
Alignm identity:
               
454
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
447, 65
               

               
Conread position:
               
498-1177
               

               
Cow position:
               
chr18:51752342-51751664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
682
               

               
Alignm identity:
               
420
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 14
               

               
Conread position:
               
500-968
               

               
Cow position:
               
chr18:43048734-43048268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 52
               

               
Conread position:
               
500-1177
               

               
Cow position:
               
chr18:53509232-53509909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
682
               

               
Alignm identity:
               
428
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 141
               

               
Conread position:
               
501-768
               

               
Cow position:
               
chr18:43053464-43053197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
151, 156
               

               
Conread position:
               
501-1245
               

               
Cow position:
               
chr18:44254060-44253320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
748
               

               
Alignm identity:
               
476
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 141
               

               
Conread position:
               
503-1211
               

               
Cow position:
               
chr18:50250839-50251537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
716
               

               
Alignm identity:
               
439
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
462, 56
               

               
Conread position:
               
503-1212
               

               
Cow position:
               
chr18:55017712-55018418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
711
               

               
Alignm identity:
               
439
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
646, 73
               

               
Conread position:
               
504-1024
               

               
Cow position:
               
chr18:42827402-42827922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
521
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
504-1177
               

               
Cow position:
               
chr18:56316047-56316720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
678
               

               
Alignm identity:
               
433
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
392, 371
               

               
Conread position:
               
506-1176
               

               
Cow position:
               
chr18:42724840-42724170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
675
               

               
Alignm identity:
               
378
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
163, 157
               

               
Conread position:
               
507-1177
               

               
Cow position:
               
chr18:56128037-56128708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
674
               

               
Alignm identity:
               
427
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 493
               

               
Conread position:
               
508-1217
               

               
Cow position:
               
chr18:54966867-54967578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
716
               

               
Alignm identity:
               
445
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 48
               

               
Conread position:
               
511-1137
               

               
Cow position:
               
chr18:33093101-33092475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
629
               

               
Alignm identity:
               
407
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
303, 292
               

               
Conread position:
               
511-1173
               

               
Cow position:
               
chr18:49022233-49022893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
668
               

               
Alignm identity:
               
408
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 42
               

               
Conread position:
               
516-1235
               

               
Cow position:
               
chr18:54979402-54980122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
724
               

               
Alignm identity:
               
445
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 38
               

               
Conread position:
               
520-1223
               

               
Cow position:
               
chr18:50295202-50295905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
706
               

               
Alignm identity:
               
448
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 113
               

               
Conread position:
               
522-765
               

               
Cow position:
               
chr18:51873716-51873959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
106, 117
               

               
Conread position:
               
522-1189
               

               
Cow position:
               
chr18:51839545-51838878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
669
               

               
Alignm identity:
               
423
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
386, 374
               

               
Conread position:
               
544-1179
               

               
Cow position:
               
chr18:42694178-42693545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
639
               

               
Alignm identity:
               
390
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 91
               

               
Conread position:
               
559-1151
               

               
Cow position:
               
chr18:51874032-51874617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
596
               

               
Alignm identity:
               
388
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
350, 127
               

               
Conread position:
               
565-1188
               

               
Cow position:
               
chr18:1417809-1418432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
626
               

               
Alignm identity:
               
404
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
225, 249
               

               
Conread position:
               
571-1176
               

               
Cow position:
               
chr18:50031085-50030478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
614
               

               
Alignm identity:
               
393
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 62
               

               
Conread position:
               
572-1212
               

               
Cow position:
               
chr18:55008459-55009098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
645
               

               
Alignm identity:
               
404
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
333, 97
               

               
Conread position:
               
578-889
               

               
Cow position:
               
chr18:56267472-56267161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
578-1219
               

               
Cow position:
               
chr18:52446928-52447570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
645
               

               
Alignm identity:
               
409
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 80
               

               
Conread position:
               
579-1249
               

               
Cow position:
               
chr18:53509227-53509898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
677
               

               
Alignm identity:
               
425
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 47
               

               
Conread position:
               
579-1287
               

               
Cow position:
               
chr18:42960552-42959853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
716
               

               
Alignm identity:
               
440
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 7
               

               
Conread position:
               
580-859
               

               
Cow position:
               
chr18:43053469-43053190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
226, 234
               

               
Conread position:
               
581-966
               

               
Cow position:
               
chr18:43048737-43048352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 54
               

               
Conread position:
               
583-1023
               

               
Cow position:
               
chr18:14453295-14452855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 53
               

               
Conread position:
               
584-1223
               

               
Cow position:
               
chr18:55067116-55066476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
643
               

               
Alignm identity:
               
416
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
251, 243
               

               
Conread position:
               
584-1251
               

               
Cow position:
               
chr18:40074933-40075601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
674
               

               
Alignm identity:
               
424
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 51
               

               
Conread position:
               
587-1250
               

               
Cow position:
               
chr18:33065109-33064445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
670
               

               
Alignm identity:
               
419
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 34
               

               
Conread position:
               
588-1222
               

               
Cow position:
               
chr18:42827402-42828042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
642
               

               
Alignm identity:
               
423
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
522, 608
               

               
Conread position:
               
592-1271
               

               
Cow position:
               
chr18:51969024-51969684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
684
               

               
Alignm identity:
               
424
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 43
               

               
Conread position:
               
595-1249
               

               
Cow position:
               
chr18:49022233-49022886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
659
               

               
Alignm identity:
               
393
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
51, 40
               

               
Conread position:
               
606-1051
               

               
Cow position:
               
chr18:55497690-55497245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
363, 390
               

               
Conread position:
               
606-1250
               

               
Cow position:
               
chr18:55523324-55523969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
651
               

               
Alignm identity:
               
401
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 46
               

               
Conread position:
               
608-1249
               

               
Cow position:
               
chr18:42694196-42693556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
647
               

               
Alignm identity:
               
404
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 12
               

               
Conread position:
               
614-957
               

               
Cow position:
               
chr18:55075112-55075456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
168, 233
               

               
Conread position:
               
623-883
               

               
Cow position:
               
chr18:51873734-51873993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
118, 10
               

               
Conread position:
               
623-1176
               

               
Cow position:
               
chr18:51752300-51751749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
555
               

               
Alignm identity:
               
360
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
168, 8
               

               
Conread position:
               
638-1176
               

               
Cow position:
               
chr18:50281638-50282176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
545
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
33, 41
               

               
Conread position:
               
638-1235
               

               
Cow position:
               
chr18:51874027-51874618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
602
               

               
Alignm identity:
               
383
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 83
               

               
Conread position:
               
647-1220
               

               
Cow position:
               
chr18:41949375-41948801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
575
               

               
Alignm identity:
               
385
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
537, 0
               

               
Conread position:
               
652-1188
               

               
Cow position:
               
chr18:51400258-51400794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
537
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
656-1134
               

               
Cow position:
               
chr18:22634540-22635016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
34, 78
               

               
Conread position:
               
656-1177
               

               
Cow position:
               
chr18:56330205-56329684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
523
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
402, 411
               

               
Conread position:
               
661-1078
               

               
Cow position:
               
chr18:43048741-43048324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
153, 145
               

               
Conread position:
               
662-979
               

               
Cow position:
               
chr18:51873689-51874005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
134, 21
               

               
Conread position:
               
662-1256
               

               
Cow position:
               
chr18:51752346-51751754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
599
               

               
Alignm identity:
               
370
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 18
               

               
Conread position:
               
666-1101
               

               
Cow position:
               
chr18:14453296-14452861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
150, 139
               

               
Conread position:
               
668-1177
               

               
Cow position:
               
chr18:51969018-51969508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
510
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
676-943
               

               
Cow position:
               
chr18:43053457-43053190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
678-1249
               

               
Cow position:
               
chr18:49033378-49032806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
573
               

               
Alignm identity:
               
361
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
512, 0
               

               
Conread position:
               
679-1189
               

               
Cow position:
               
chr18:33093101-33092591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
512
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
448, 458
               

               
Conread position:
               
694-1189
               

               
Cow position:
               
chr18:43094219-43093731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
497
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
280, 24
               

               
Conread position:
               
721-1269
               

               
Cow position:
               
chr18:51874026-51874568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
555
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 94
               

               
Conread position:
               
725-1279
               

               
Cow position:
               
chr18:51766112-51765561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
559
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
264, 33
               

               
Conread position:
               
730-1138
               

               
Cow position:
               
chr18:40086965-40086560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
11, 74
               

               
Conread position:
               
731-1251
               

               
Cow position:
               
chr18:42985587-42985066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
528
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 72
               

               
Conread position:
               
733-1177
               

               
Cow position:
               
chr18:42790855-42791299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 23
               

               
Conread position:
               
733-1252
               

               
Cow position:
               
chr18:50059732-50059212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
524
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
36, 44
               

               
Conread position:
               
734-1177
               

               
Cow position:
               
chr18:51970316-51970751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
141, 59
               

               
Conread position:
               
737-1189
               

               
Cow position:
               
chr18:54979371-54979823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
78, 69
               

               
Conread position:
               
744-1188
               

               
Cow position:
               
chr18:52432884-52433328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
299, 313
               

               
Conread position:
               
745-1204
               

               
Cow position:
               
chr18:43048741-43048285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 58
               

               
Conread position:
               
747-1249
               

               
Cow position:
               
chr18:42744728-42744225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
507
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
139, 145
               

               
Conread position:
               
752-1187
               

               
Cow position:
               
chr18:14453294-14452859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
394, 389
               

               
Conread position:
               
757-1097
               

               
Cow position:
               
chr18:50251791-50252127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
157, 99
               

               
Conread position:
               
773-1189
               

               
Cow position:
               
chr18:55523323-55523739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
111, 130
               

               
Conread position:
               
775-1177
               

               
Cow position:
               
chr18:50281691-50282093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 111
               

               
Conread position:
               
795-1111
               

               
Cow position:
               
chr18:43053509-43053190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
795-1235
               

               
Cow position:
               
chr18:42837983-42837542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
393, 0
               

               
Conread position:
               
815-1189
               

               
Cow position:
               
chr18:50281647-50282021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
24, 32
               

               
Conread position:
               
820-1252
               

               
Cow position:
               
chr18:50295168-50295599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
16, 6
               

               
Conread position:
               
821-1245
               

               
Cow position:
               
chr18:42827383-42827808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
82, 65
               

               
Conread position:
               
822-1188
               

               
Cow position:
               
chr18:14453308-14452942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
321, 338
               

               
Conread position:
               
823-1025
               

               
Cow position:
               
chr18:43053394-43053192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
823-1250
               

               
Cow position:
               
chr18:43023090-43022662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 76
               

               
Conread position:
               
828-1249
               

               
Cow position:
               
chr18:56315950-56316373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
833-1192
               

               
Cow position:
               
chr18:56248245-56247893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
59, 21
               

               
Conread position:
               
833-1197
               

               
Cow position:
               
chr18:43048737-43048372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 54
               

               
Conread position:
               
893-1213
               

               
Cow position:
               
chr18:41949381-41949061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
315, 303
               

               
Conread position:
               
894-1219
               

               
Cow position:
               
chr18:43023103-43022777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
290, 0
               

               
Conread position:
               
894-1248
               

               
Cow position:
               
chr18:50031098-50030744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
251, 159
               

               
Conread position:
               
913-1287
               

               
Cow position:
               
chr18:43048741-43048366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
271, 313
               

               
Conread position:
               
914-1173
               

               
Cow position:
               
chr18:33093118-33092859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
134, 151
               

               
Conread position:
               
915-1189
               

               
Cow position:
               
chr18:14454031-14453757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
54, 64
               

               
Conread position:
               
918-1188
               

               
Cow position:
               
chr18:40306161-40306431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
57, 46
               

               
Conread position:
               
929-1188
               

               
Cow position:
               
chr18:56330184-56329925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
132, 123
               

               
Conread position:
               
947-1188
               

               
Cow position:
               
chr18:43053438-43053197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
958-1255
               

               
Cow position:
               
chr18:51873733-51874029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
90, 13
               

               
Conread position:
               
972-1188
               

               
Cow position:
               
chr18:44184924-44184708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
972-1251
               

               
Cow position:
               
chr18:43023109-43022829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
92, 80
               

               
Conread position:
               
978-1211
               

               
Cow position:
               
chr18:44239725-44239959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
89, 84
               
Show alignments to all cow chromosomes.