Cow genome map

Conread name: Ss1.1-rdbla0127_j23.5.5

Conread position: 176-929
Cow position:
Alignm length: 772
Alignm identity: 491
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 317

Conread position: 176-1136
Cow position:
Alignm length: 982
Alignm identity: 636
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 595

Conread position: 179-1018
Cow position:
Alignm length: 862
Alignm identity: 557
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 315

Conread position: 179-1137
Cow position:
Alignm length: 977
Alignm identity: 643
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 234

Conread position: 179-1247
Cow position:
Alignm length: 1089
Alignm identity: 698
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 303

Conread position: 180-1024
Cow position:
Alignm length: 861
Alignm identity: 542
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 759

Conread position: 180-1089
Cow position:
Alignm length: 929
Alignm identity: 607
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 639

Conread position: 184-1176
Cow position:
Alignm length: 1009
Alignm identity: 641
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 724

Conread position: 187-948
Cow position:
Alignm length: 777
Alignm identity: 468
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 261

Conread position: 187-1096
Cow position:
Alignm length: 927
Alignm identity: 595
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 297

Conread position: 187-1134
Cow position:
Alignm length: 967
Alignm identity: 631
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 335

Conread position: 187-1155
Cow position:
Alignm length: 992
Alignm identity: 629
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 239

Conread position: 187-1164
Cow position:
Alignm length: 996
Alignm identity: 654
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 340

Conread position: 187-1177
Cow position:
Alignm length: 1007
Alignm identity: 666
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 306

Conread position: 187-1177
Cow position:
Alignm length: 1010
Alignm identity: 629
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 224

Conread position: 187-1188
Cow position:
Alignm length: 1017
Alignm identity: 670
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 0

Conread position: 187-1189
Cow position:
Alignm length: 1019
Alignm identity: 658
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 967

Conread position: 187-1219
Cow position:
Alignm length: 1051
Alignm identity: 696
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 131

Conread position: 187-1235
Cow position:
Alignm length: 1069
Alignm identity: 717
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 236

Conread position: 188-1177
Cow position:
Alignm length: 1001
Alignm identity: 635
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 92

Conread position: 188-1213
Cow position:
Alignm length: 1046
Alignm identity: 690
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 304

Conread position: 191-638
Cow position:
Alignm length: 463
Alignm identity: 292
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 49, 7

Conread position: 200-879
Cow position:
Alignm length: 687
Alignm identity: 443
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 126

Conread position: 201-838
Cow position:
Alignm length: 656
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 219

Conread position: 244-854
Cow position:
Alignm length: 625
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 581

Conread position: 279-693
Cow position:
Alignm length: 421
Alignm identity: 261
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 49, 108

Conread position: 279-717
Cow position:
Alignm length: 442
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 357

Conread position: 280-1155
Cow position:
Alignm length: 881
Alignm identity: 566
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 192

Conread position: 281-850
Cow position:
Alignm length: 577
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 30

Conread position: 281-1022
Cow position:
Alignm length: 747
Alignm identity: 460
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 63

Conread position: 281-1245
Cow position:
Alignm length: 975
Alignm identity: 631
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 21

Conread position: 281-1249
Cow position:
Alignm length: 976
Alignm identity: 643
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 139

Conread position: 284-783
Cow position:
Alignm length: 505
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 275

Conread position: 284-967
Cow position:
Alignm length: 690
Alignm identity: 458
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 19

Conread position: 284-1103
Cow position:
Alignm length: 826
Alignm identity: 510
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 25

Conread position: 320-714
Cow position:
Alignm length: 396
Alignm identity: 244
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 271, 108

Conread position: 321-1173
Cow position:
Alignm length: 855
Alignm identity: 547
Alignm E-value: 0
Alignm gaps (pig, cow): 322, 186

Conread position: 323-1189
Cow position:
Alignm length: 869
Alignm identity: 585
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 13

Conread position: 325-950
Cow position:
Alignm length: 627
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 147

Conread position: 326-1047
Cow position:
Alignm length: 723
Alignm identity: 472
Alignm E-value: 0
Alignm gaps (pig, cow): 478, 116

Conread position: 334-860
Cow position:
Alignm length: 531
Alignm identity: 333
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 38, 19

Conread position: 337-867
Cow position:
Alignm length: 535
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 149

Conread position: 338-1188
Cow position:
Alignm length: 851
Alignm identity: 554
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 341-1248
Cow position:
Alignm length: 910
Alignm identity: 604
Alignm E-value: 0
Alignm gaps (pig, cow): 308, 315

Conread position: 344-1223
Cow position:
Alignm length: 883
Alignm identity: 559
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 145

Conread position: 356-1188
Cow position:
Alignm length: 834
Alignm identity: 540
Alignm E-value: 0
Alignm gaps (pig, cow): 432, 438

Conread position: 362-1099
Cow position:
Alignm length: 739
Alignm identity: 484
Alignm E-value: 0
Alignm gaps (pig, cow): 570, 294

Conread position: 414-754
Cow position:
Alignm length: 342
Alignm identity: 224
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 238, 248

Conread position: 417-1188
Cow position:
Alignm length: 774
Alignm identity: 497
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 66

Conread position: 417-1247
Cow position:
Alignm length: 834
Alignm identity: 557
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 64

Conread position: 424-1251
Cow position:
Alignm length: 832
Alignm identity: 533
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 16

Conread position: 429-1136
Cow position:
Alignm length: 713
Alignm identity: 458
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 71

Conread position: 465-1064
Cow position:
Alignm length: 613
Alignm identity: 386
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 20, 53

Conread position: 477-1166
Cow position:
Alignm length: 695
Alignm identity: 467
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 20

Conread position: 482-1188
Cow position:
Alignm length: 708
Alignm identity: 454
Alignm E-value: 0
Alignm gaps (pig, cow): 328, 193

Conread position: 488-977
Cow position:
Alignm length: 490
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 0

Conread position: 500-1119
Cow position:
Alignm length: 624
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 75

Conread position: 500-1188
Cow position:
Alignm length: 689
Alignm identity: 448
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 0

Conread position: 524-1189
Cow position:
Alignm length: 669
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 50

Conread position: 564-1046
Cow position:
Alignm length: 486
Alignm identity: 304
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 133, 89

Conread position: 571-1137
Cow position:
Alignm length: 569
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 38

Conread position: 583-1195
Cow position:
Alignm length: 615
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 479, 469

Conread position: 629-1177
Cow position:
Alignm length: 549
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 284, 0

Conread position: 656-1279
Cow position:
Alignm length: 626
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 534, 570

Conread position: 660-1142
Cow position:
Alignm length: 486
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 240, 76

Conread position: 699-1138
Cow position:
Alignm length: 445
Alignm identity: 278
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 136, 52

Conread position: 701-1270
Cow position:
Alignm length: 574
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 104

Conread position: 722-1189
Cow position:
Alignm length: 471
Alignm identity: 290
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 23, 8

Conread position: 725-1273
Cow position:
Alignm length: 552
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 18

Conread position: 739-1250
Cow position:
Alignm length: 515
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 66

Conread position: 752-1180
Cow position:
Alignm length: 434
Alignm identity: 271
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 49, 24

Conread position: 772-1174
Cow position:
Alignm length: 406
Alignm identity: 268
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 341, 52

Conread position: 842-1188
Cow position:
Alignm length: 347
Alignm identity: 227
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 326, 0

Conread position: 905-1176
Cow position:
Alignm length: 272
Alignm identity: 170
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 950-1263
Cow position:
Alignm length: 316
Alignm identity: 212
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 241, 276

Show alignments to all cow chromosomes.