Cow genome map
| Conread name: | Ss1.1-rdbla0127_j23.5.5 |
| Conread position: | 179-1249 |
| Cow position: | chr2:78754503-78755572 (view UCSC Genome Browser custom track) |
| Alignm length: | 1090 |
| Alignm identity: | 706 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 142 |
| Conread position: | 179-1249 |
| Cow position: | chr2:78755243-78756325 (view UCSC Genome Browser custom track) |
| Alignm length: | 1093 |
| Alignm identity: | 690 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 94 |
| Conread position: | 188-1000 |
| Cow position: | chr2:82799611-82800438 (view UCSC Genome Browser custom track) |
| Alignm length: | 831 |
| Alignm identity: | 539 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 305 |
| Conread position: | 277-1183 |
| Cow position: | chr2:82799544-82800453 (view UCSC Genome Browser custom track) |
| Alignm length: | 912 |
| Alignm identity: | 568 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 622 |
| Conread position: | 277-1249 |
| Cow position: | chr2:82799460-82800436 (view UCSC Genome Browser custom track) |
| Alignm length: | 984 |
| Alignm identity: | 625 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 185 |
| Conread position: | 277-1251 |
| Cow position: | chr2:78754446-78755407 (view UCSC Genome Browser custom track) |
| Alignm length: | 981 |
| Alignm identity: | 627 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 250 |
| Conread position: | 278-1245 |
| Cow position: | chr2:78754698-78755652 (view UCSC Genome Browser custom track) |
| Alignm length: | 974 |
| Alignm identity: | 656 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 25 |
| Conread position: | 279-1248 |
| Cow position: | chr2:78754852-78755821 (view UCSC Genome Browser custom track) |
| Alignm length: | 976 |
| Alignm identity: | 634 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 485 |
| Conread position: | 280-1046 |
| Cow position: | chr2:86465455-86466222 (view UCSC Genome Browser custom track) |
| Alignm length: | 773 |
| Alignm identity: | 463 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 153 |
| Conread position: | 280-1186 |
| Cow position: | chr2:5875161-5874254 (view UCSC Genome Browser custom track) |
| Alignm length: | 917 |
| Alignm identity: | 536 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 23 |
| Conread position: | 280-1249 |
| Cow position: | chr2:78754118-78755070 (view UCSC Genome Browser custom track) |
| Alignm length: | 979 |
| Alignm identity: | 616 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 22 |
| Conread position: | 281-1103 |
| Cow position: | chr2:86465372-86466197 (view UCSC Genome Browser custom track) |
| Alignm length: | 829 |
| Alignm identity: | 501 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 211 |
| Conread position: | 284-1177 |
| Cow position: | chr2:86465207-86466103 (view UCSC Genome Browser custom track) |
| Alignm length: | 902 |
| Alignm identity: | 530 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 132 |
| Conread position: | 313-873 |
| Cow position: | chr2:5874705-5874145 (view UCSC Genome Browser custom track) |
| Alignm length: | 564 |
| Alignm identity: | 329 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 87, 92 |
| Conread position: | 325-1176 |
| Cow position: | chr2:86465167-86466018 (view UCSC Genome Browser custom track) |
| Alignm length: | 856 |
| Alignm identity: | 514 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 80, 75 |
| Conread position: | 334-1249 |
| Cow position: | chr2:78754091-78754986 (view UCSC Genome Browser custom track) |
| Alignm length: | 923 |
| Alignm identity: | 587 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 42 |
| Conread position: | 338-957 |
| Cow position: | chr2:5874764-5874145 (view UCSC Genome Browser custom track) |
| Alignm length: | 624 |
| Alignm identity: | 381 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 61 |
| Conread position: | 338-1174 |
| Cow position: | chr2:5875016-5874180 (view UCSC Genome Browser custom track) |
| Alignm length: | 840 |
| Alignm identity: | 504 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 622, 640 |
| Conread position: | 344-1173 |
| Cow position: | chr2:78754836-78755663 (view UCSC Genome Browser custom track) |
| Alignm length: | 833 |
| Alignm identity: | 556 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 284, 295 |
| Conread position: | 356-1173 |
| Cow position: | chr2:86465366-86466183 (view UCSC Genome Browser custom track) |
| Alignm length: | 820 |
| Alignm identity: | 487 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 40 |
| Conread position: | 364-1174 |
| Cow position: | chr2:5875158-5874348 (view UCSC Genome Browser custom track) |
| Alignm length: | 815 |
| Alignm identity: | 477 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 264, 272 |
| Conread position: | 406-1179 |
| Cow position: | chr2:86465082-86465853 (view UCSC Genome Browser custom track) |
| Alignm length: | 780 |
| Alignm identity: | 455 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 31, 13 |
| Conread position: | 425-797 |
| Cow position: | chr2:48689540-48689168 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 237 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 54, 43 |
| Conread position: | 426-1176 |
| Cow position: | chr2:5875180-5874430 (view UCSC Genome Browser custom track) |
| Alignm length: | 758 |
| Alignm identity: | 453 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 52 |
| Conread position: | 439-1177 |
| Cow position: | chr2:82799457-82800195 (view UCSC Genome Browser custom track) |
| Alignm length: | 745 |
| Alignm identity: | 477 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 39 |
| Conread position: | 477-1177 |
| Cow position: | chr2:86465067-86465767 (view UCSC Genome Browser custom track) |
| Alignm length: | 705 |
| Alignm identity: | 448 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 108, 73 |
| Conread position: | 509-878 |
| Cow position: | chr2:48689540-48689171 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 232 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 64, 43 |
| Conread position: | 510-1189 |
| Cow position: | chr2:5875180-5874501 (view UCSC Genome Browser custom track) |
| Alignm length: | 684 |
| Alignm identity: | 425 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 464, 479 |
| Conread position: | 523-1251 |
| Cow position: | chr2:82799457-82800186 (view UCSC Genome Browser custom track) |
| Alignm length: | 733 |
| Alignm identity: | 470 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 120, 114 |
| Conread position: | 690-1162 |
| Cow position: | chr2:82799456-82799928 (view UCSC Genome Browser custom track) |
| Alignm length: | 477 |
| Alignm identity: | 310 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 120, 115 |
| Conread position: | 764-1136 |
| Cow position: | chr2:48689538-48689166 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 235 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 9, 38 |
Show alignments to all cow chromosomes.