Cow genome map
| Conread name: | Ss1.1-rdbla0127_j23.5.5 |
| Conread position: | 188-883 |
| Cow position: | chr21:12659253-12659963 (view UCSC Genome Browser custom track) |
| Alignm length: | 714 |
| Alignm identity: | 411 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 51, 124 |
| Conread position: | 281-767 |
| Cow position: | chr21:34223030-34222541 (view UCSC Genome Browser custom track) |
| Alignm length: | 495 |
| Alignm identity: | 304 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 13, 19 |
| Conread position: | 281-1173 |
| Cow position: | chr21:12608824-12607929 (view UCSC Genome Browser custom track) |
| Alignm length: | 903 |
| Alignm identity: | 531 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 180 |
| Conread position: | 338-1176 |
| Cow position: | chr21:12658830-12659668 (view UCSC Genome Browser custom track) |
| Alignm length: | 842 |
| Alignm identity: | 490 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 288, 294 |
| Conread position: | 340-851 |
| Cow position: | chr21:34223052-34222541 (view UCSC Genome Browser custom track) |
| Alignm length: | 518 |
| Alignm identity: | 328 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 160, 151 |
| Conread position: | 356-1173 |
| Cow position: | chr21:12608914-12608097 (view UCSC Genome Browser custom track) |
| Alignm length: | 825 |
| Alignm identity: | 477 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 51, 58 |
| Conread position: | 391-883 |
| Cow position: | chr21:34223087-34222593 (view UCSC Genome Browser custom track) |
| Alignm length: | 497 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 186 |
| Conread position: | 420-1134 |
| Cow position: | chr21:12608932-12608219 (view UCSC Genome Browser custom track) |
| Alignm length: | 717 |
| Alignm identity: | 420 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 369, 25 |
| Conread position: | 488-838 |
| Cow position: | chr21:12608278-12607928 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 225 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 82, 61 |
| Conread position: | 488-1019 |
| Cow position: | chr21:34223072-34222541 (view UCSC Genome Browser custom track) |
| Alignm length: | 535 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 300, 309 |
| Conread position: | 530-1176 |
| Cow position: | chr21:12608908-12608262 (view UCSC Genome Browser custom track) |
| Alignm length: | 650 |
| Alignm identity: | 385 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 373, 359 |
| Conread position: | 590-1177 |
| Cow position: | chr21:12658830-12659417 (view UCSC Genome Browser custom track) |
| Alignm length: | 591 |
| Alignm identity: | 354 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 201, 208 |
| Conread position: | 590-1192 |
| Cow position: | chr21:34223135-34222536 (view UCSC Genome Browser custom track) |
| Alignm length: | 605 |
| Alignm identity: | 369 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 49 |
| Conread position: | 647-1176 |
| Cow position: | chr21:12658803-12659332 (view UCSC Genome Browser custom track) |
| Alignm length: | 533 |
| Alignm identity: | 315 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 144, 151 |
Show alignments to all cow chromosomes.