Cow genome map
| Conread name: | Ss1.1-rdbla0127_j23.5.5 |
| Conread position: | 180-1223 |
| Cow position: | chr24:17036303-17035242 (view UCSC Genome Browser custom track) |
| Alignm length: | 1064 |
| Alignm identity: | 680 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 314 |
| Conread position: | 187-985 |
| Cow position: | chr24:17078262-17077451 (view UCSC Genome Browser custom track) |
| Alignm length: | 814 |
| Alignm identity: | 488 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 754 |
| Conread position: | 187-1204 |
| Cow position: | chr24:17035959-17034927 (view UCSC Genome Browser custom track) |
| Alignm length: | 1034 |
| Alignm identity: | 639 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 128 |
| Conread position: | 188-608 |
| Cow position: | chr24:17070627-17071062 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 305 |
| Conread position: | 188-1222 |
| Cow position: | chr24:17036126-17035076 (view UCSC Genome Browser custom track) |
| Alignm length: | 1053 |
| Alignm identity: | 687 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 305 |
| Conread position: | 188-1249 |
| Cow position: | chr24:17036378-17035301 (view UCSC Genome Browser custom track) |
| Alignm length: | 1082 |
| Alignm identity: | 705 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 305 |
| Conread position: | 188-1249 |
| Cow position: | chr24:17036546-17035469 (view UCSC Genome Browser custom track) |
| Alignm length: | 1086 |
| Alignm identity: | 712 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 305 |
| Conread position: | 276-857 |
| Cow position: | chr24:17070476-17071059 (view UCSC Genome Browser custom track) |
| Alignm length: | 589 |
| Alignm identity: | 394 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 5 |
| Conread position: | 280-1212 |
| Cow position: | chr24:17036607-17035674 (view UCSC Genome Browser custom track) |
| Alignm length: | 937 |
| Alignm identity: | 594 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 30 |
| Conread position: | 281-610 |
| Cow position: | chr24:17013185-17013516 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 218 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 41, 318 |
| Conread position: | 284-1008 |
| Cow position: | chr24:17078237-17077510 (view UCSC Genome Browser custom track) |
| Alignm length: | 729 |
| Alignm identity: | 457 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 200 |
| Conread position: | 320-921 |
| Cow position: | chr24:17070438-17071039 (view UCSC Genome Browser custom track) |
| Alignm length: | 603 |
| Alignm identity: | 394 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 152, 158 |
| Conread position: | 320-1141 |
| Cow position: | chr24:17078282-17077462 (view UCSC Genome Browser custom track) |
| Alignm length: | 823 |
| Alignm identity: | 506 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 673, 667 |
| Conread position: | 356-554 |
| Cow position: | chr24:16986445-16986643 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 112, 123 |
| Conread position: | 356-681 |
| Cow position: | chr24:17013179-17013504 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 214 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 124, 111 |
| Conread position: | 356-1224 |
| Cow position: | chr24:17078330-17077461 (view UCSC Genome Browser custom track) |
| Alignm length: | 870 |
| Alignm identity: | 515 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 865, 0 |
| Conread position: | 437-1092 |
| Cow position: | chr24:17070387-17071042 (view UCSC Genome Browser custom track) |
| Alignm length: | 659 |
| Alignm identity: | 440 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 26 |
| Conread position: | 440-653 |
| Cow position: | chr24:16986445-16986658 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 34, 49 |
| Conread position: | 446-1026 |
| Cow position: | chr24:17070480-17071060 (view UCSC Genome Browser custom track) |
| Alignm length: | 584 |
| Alignm identity: | 404 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 26 |
| Conread position: | 503-1176 |
| Cow position: | chr24:17070369-17071042 (view UCSC Genome Browser custom track) |
| Alignm length: | 677 |
| Alignm identity: | 460 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 297, 306 |
| Conread position: | 523-871 |
| Cow position: | chr24:17013178-17013525 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 226 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 120, 112 |
| Conread position: | 559-1247 |
| Cow position: | chr24:17078379-17077690 (view UCSC Genome Browser custom track) |
| Alignm length: | 691 |
| Alignm identity: | 419 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 73 |
| Conread position: | 591-917 |
| Cow position: | chr24:17013162-17013488 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 214 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 606-806 |
| Cow position: | chr24:16986443-16986643 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 140 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 121, 115 |
| Conread position: | 630-1189 |
| Cow position: | chr24:17070412-17070971 (view UCSC Genome Browser custom track) |
| Alignm length: | 561 |
| Alignm identity: | 368 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 178, 184 |
| Conread position: | 656-1249 |
| Cow position: | chr24:17070353-17070948 (view UCSC Genome Browser custom track) |
| Alignm length: | 598 |
| Alignm identity: | 386 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 484 |
| Conread position: | 660-1019 |
| Cow position: | chr24:17013147-17013506 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 236 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 155, 143 |
| Conread position: | 692-914 |
| Cow position: | chr24:16986445-16986670 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 118, 111 |
| Conread position: | 759-1123 |
| Cow position: | chr24:17013162-17013525 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 238 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 141, 126 |
| Conread position: | 840-1069 |
| Cow position: | chr24:16986425-16986654 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 843-1210 |
| Cow position: | chr24:17013162-17013529 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 232 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 150, 139 |
| Conread position: | 913-1189 |
| Cow position: | chr24:17013148-17013424 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 186 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 140, 149 |
| Conread position: | 952-1161 |
| Cow position: | chr24:16986453-16986665 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 102, 111 |
Show alignments to all cow chromosomes.