Cow genome map
| Conread name: | Ss1.1-rdbla0127_j23.5.5 |
| Conread position: | 178-709 |
| Cow position: | chr3:62742935-62743460 (view UCSC Genome Browser custom track) |
| Alignm length: | 539 |
| Alignm identity: | 355 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 51 |
| Conread position: | 180-938 |
| Cow position: | chr3:68045594-68046364 (view UCSC Genome Browser custom track) |
| Alignm length: | 776 |
| Alignm identity: | 497 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 5 |
| Conread position: | 187-850 |
| Cow position: | chr3:62722242-62721564 (view UCSC Genome Browser custom track) |
| Alignm length: | 681 |
| Alignm identity: | 443 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 465 |
| Conread position: | 187-1272 |
| Cow position: | chr3:62742361-62743436 (view UCSC Genome Browser custom track) |
| Alignm length: | 1104 |
| Alignm identity: | 704 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 280 |
| Conread position: | 188-749 |
| Cow position: | chr3:68027176-68027752 (view UCSC Genome Browser custom track) |
| Alignm length: | 578 |
| Alignm identity: | 376 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 299 |
| Conread position: | 191-1143 |
| Cow position: | chr3:62742533-62743474 (view UCSC Genome Browser custom track) |
| Alignm length: | 971 |
| Alignm identity: | 628 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 125 |
| Conread position: | 280-921 |
| Cow position: | chr3:62722221-62721577 (view UCSC Genome Browser custom track) |
| Alignm length: | 646 |
| Alignm identity: | 425 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 195 |
| Conread position: | 280-994 |
| Cow position: | chr3:62722305-62721588 (view UCSC Genome Browser custom track) |
| Alignm length: | 721 |
| Alignm identity: | 493 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 29 |
| Conread position: | 281-909 |
| Cow position: | chr3:68027113-68027744 (view UCSC Genome Browser custom track) |
| Alignm length: | 634 |
| Alignm identity: | 422 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 191 |
| Conread position: | 282-1129 |
| Cow position: | chr3:77351302-77350473 (view UCSC Genome Browser custom track) |
| Alignm length: | 860 |
| Alignm identity: | 540 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 122 |
| Conread position: | 319-1213 |
| Cow position: | chr3:62742341-62743209 (view UCSC Genome Browser custom track) |
| Alignm length: | 899 |
| Alignm identity: | 582 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 487, 15 |
| Conread position: | 325-993 |
| Cow position: | chr3:68027076-68027744 (view UCSC Genome Browser custom track) |
| Alignm length: | 673 |
| Alignm identity: | 437 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 145, 152 |
| Conread position: | 325-993 |
| Cow position: | chr3:68045669-68046337 (view UCSC Genome Browser custom track) |
| Alignm length: | 670 |
| Alignm identity: | 450 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 247, 232 |
| Conread position: | 343-1091 |
| Cow position: | chr3:68045603-68046351 (view UCSC Genome Browser custom track) |
| Alignm length: | 753 |
| Alignm identity: | 502 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 53 |
| Conread position: | 349-1120 |
| Cow position: | chr3:68027016-68027788 (view UCSC Genome Browser custom track) |
| Alignm length: | 777 |
| Alignm identity: | 510 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 68 |
| Conread position: | 356-1092 |
| Cow position: | chr3:62722310-62721574 (view UCSC Genome Browser custom track) |
| Alignm length: | 740 |
| Alignm identity: | 499 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 122, 116 |
| Conread position: | 364-870 |
| Cow position: | chr3:62743036-62743534 (view UCSC Genome Browser custom track) |
| Alignm length: | 508 |
| Alignm identity: | 319 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 277, 80 |
| Conread position: | 385-1173 |
| Cow position: | chr3:68045561-68046349 (view UCSC Genome Browser custom track) |
| Alignm length: | 794 |
| Alignm identity: | 519 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 45 |
| Conread position: | 415-1190 |
| Cow position: | chr3:62742269-62743034 (view UCSC Genome Browser custom track) |
| Alignm length: | 778 |
| Alignm identity: | 511 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 237, 86 |
| Conread position: | 417-1189 |
| Cow position: | chr3:68027000-68027770 (view UCSC Genome Browser custom track) |
| Alignm length: | 776 |
| Alignm identity: | 501 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 52 |
| Conread position: | 427-1177 |
| Cow position: | chr3:62722323-62721573 (view UCSC Genome Browser custom track) |
| Alignm length: | 756 |
| Alignm identity: | 525 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 51 |
| Conread position: | 469-1253 |
| Cow position: | chr3:68045562-68046347 (view UCSC Genome Browser custom track) |
| Alignm length: | 791 |
| Alignm identity: | 515 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 8 |
| Conread position: | 477-1228 |
| Cow position: | chr3:68026976-68027728 (view UCSC Genome Browser custom track) |
| Alignm length: | 756 |
| Alignm identity: | 485 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 105 |
| Conread position: | 480-1235 |
| Cow position: | chr3:62742250-62743001 (view UCSC Genome Browser custom track) |
| Alignm length: | 765 |
| Alignm identity: | 499 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 16 |
| Conread position: | 482-1251 |
| Cow position: | chr3:62722352-62721582 (view UCSC Genome Browser custom track) |
| Alignm length: | 776 |
| Alignm identity: | 529 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 15 |
| Conread position: | 621-1175 |
| Cow position: | chr3:77351296-77350750 (view UCSC Genome Browser custom track) |
| Alignm length: | 562 |
| Alignm identity: | 339 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 56, 116 |
| Conread position: | 701-1247 |
| Cow position: | chr3:77351300-77350761 (view UCSC Genome Browser custom track) |
| Alignm length: | 551 |
| Alignm identity: | 338 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 60, 102 |
| Conread position: | 705-1249 |
| Cow position: | chr3:62722381-62721836 (view UCSC Genome Browser custom track) |
| Alignm length: | 548 |
| Alignm identity: | 353 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 101, 109 |
Show alignments to all cow chromosomes.