Cow genome map
| Conread name: | Ss1.1-rdbla0127_j23.5.5 |
| Conread position: | 187-1223 |
| Cow position: | chr6:49340403-49341454 (view UCSC Genome Browser custom track) |
| Alignm length: | 1058 |
| Alignm identity: | 719 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 466 |
| Conread position: | 188-876 |
| Cow position: | chr6:49396293-49396996 (view UCSC Genome Browser custom track) |
| Alignm length: | 708 |
| Alignm identity: | 429 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 55, 124 |
| Conread position: | 265-1219 |
| Cow position: | chr6:49340328-49341283 (view UCSC Genome Browser custom track) |
| Alignm length: | 960 |
| Alignm identity: | 630 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 35 |
| Conread position: | 279-933 |
| Cow position: | chr6:49396312-49396969 (view UCSC Genome Browser custom track) |
| Alignm length: | 661 |
| Alignm identity: | 399 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 123 |
| Conread position: | 281-1151 |
| Cow position: | chr6:49395984-49396851 (view UCSC Genome Browser custom track) |
| Alignm length: | 877 |
| Alignm identity: | 522 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 125 |
| Conread position: | 281-1176 |
| Cow position: | chr6:49428333-49429231 (view UCSC Genome Browser custom track) |
| Alignm length: | 905 |
| Alignm identity: | 505 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 12, 22 |
| Conread position: | 338-1148 |
| Cow position: | chr6:49428729-49429537 (view UCSC Genome Browser custom track) |
| Alignm length: | 813 |
| Alignm identity: | 461 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 68, 61 |
| Conread position: | 339-1135 |
| Cow position: | chr6:49396129-49396919 (view UCSC Genome Browser custom track) |
| Alignm length: | 799 |
| Alignm identity: | 483 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 287, 99 |
| Conread position: | 340-1173 |
| Cow position: | chr6:49428647-49429480 (view UCSC Genome Browser custom track) |
| Alignm length: | 840 |
| Alignm identity: | 484 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 51, 65 |
| Conread position: | 354-1051 |
| Cow position: | chr6:49396222-49396919 (view UCSC Genome Browser custom track) |
| Alignm length: | 699 |
| Alignm identity: | 440 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 118, 125 |
| Conread position: | 362-1176 |
| Cow position: | chr6:49395816-49396624 (view UCSC Genome Browser custom track) |
| Alignm length: | 819 |
| Alignm identity: | 482 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 40 |
| Conread position: | 365-1166 |
| Cow position: | chr6:49428252-49429053 (view UCSC Genome Browser custom track) |
| Alignm length: | 808 |
| Alignm identity: | 456 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 39, 33 |
| Conread position: | 367-1176 |
| Cow position: | chr6:49395905-49396708 (view UCSC Genome Browser custom track) |
| Alignm length: | 815 |
| Alignm identity: | 483 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 107, 127 |
| Conread position: | 424-1137 |
| Cow position: | chr6:49396046-49396753 (view UCSC Genome Browser custom track) |
| Alignm length: | 716 |
| Alignm identity: | 440 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 62 |
| Conread position: | 520-1142 |
| Cow position: | chr6:49395890-49396506 (view UCSC Genome Browser custom track) |
| Alignm length: | 625 |
| Alignm identity: | 388 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 271, 284 |
| Conread position: | 668-1175 |
| Cow position: | chr6:49362330-49362825 (view UCSC Genome Browser custom track) |
| Alignm length: | 509 |
| Alignm identity: | 297 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 123, 136 |
Show alignments to all cow chromosomes.