Cow genome map
| Conread name: | Ss1.1-rdbla0134_b19.5 |
| Conread position: | 1-471 |
| Cow position: | chr13:24162474-24162944 (view UCSC Genome Browser custom track) |
| Alignm length: | 473 |
| Alignm identity: | 282 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 68, 61 |
| Conread position: | 1-509 |
| Cow position: | chr13:56333787-56334304 (view UCSC Genome Browser custom track) |
| Alignm length: | 520 |
| Alignm identity: | 314 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 76, 71 |
| Conread position: | 1-511 |
| Cow position: | chr13:39984055-39984565 (view UCSC Genome Browser custom track) |
| Alignm length: | 513 |
| Alignm identity: | 311 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 163, 172 |
| Conread position: | 1-511 |
| Cow position: | chr13:39984139-39984649 (view UCSC Genome Browser custom track) |
| Alignm length: | 515 |
| Alignm identity: | 311 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 88, 80 |
| Conread position: | 1-523 |
| Cow position: | chr13:39984223-39984747 (view UCSC Genome Browser custom track) |
| Alignm length: | 527 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 326, 302 |
| Conread position: | 3-425 |
| Cow position: | chr13:39984477-39984899 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 269 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 65, 53 |
| Conread position: | 3-474 |
| Cow position: | chr13:39984393-39984864 (view UCSC Genome Browser custom track) |
| Alignm length: | 475 |
| Alignm identity: | 298 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 148, 135 |
| Conread position: | 3-483 |
| Cow position: | chr13:56292708-56292221 (view UCSC Genome Browser custom track) |
| Alignm length: | 490 |
| Alignm identity: | 292 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 126, 195 |
| Conread position: | 3-511 |
| Cow position: | chr13:39983973-39984481 (view UCSC Genome Browser custom track) |
| Alignm length: | 510 |
| Alignm identity: | 306 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 323, 305 |
| Conread position: | 4-435 |
| Cow position: | chr13:39930722-39931153 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 135, 139 |
| Conread position: | 4-462 |
| Cow position: | chr13:22125171-22125629 (view UCSC Genome Browser custom track) |
| Alignm length: | 462 |
| Alignm identity: | 275 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 60, 64 |
| Conread position: | 4-462 |
| Cow position: | chr13:24162897-24163355 (view UCSC Genome Browser custom track) |
| Alignm length: | 462 |
| Alignm identity: | 271 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 60, 64 |
| Conread position: | 4-482 |
| Cow position: | chr13:39930638-39931116 (view UCSC Genome Browser custom track) |
| Alignm length: | 480 |
| Alignm identity: | 312 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 124, 139 |
| Conread position: | 5-505 |
| Cow position: | chr13:56292280-56291790 (view UCSC Genome Browser custom track) |
| Alignm length: | 503 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 299, 76 |
| Conread position: | 16-481 |
| Cow position: | chr13:39984322-39984787 (view UCSC Genome Browser custom track) |
| Alignm length: | 466 |
| Alignm identity: | 288 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 18-435 |
| Cow position: | chr13:56292856-56292444 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 253 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 90, 110 |
| Conread position: | 24-482 |
| Cow position: | chr13:39930573-39931032 (view UCSC Genome Browser custom track) |
| Alignm length: | 463 |
| Alignm identity: | 299 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 31 |
| Conread position: | 32-520 |
| Cow position: | chr13:56292337-56291859 (view UCSC Genome Browser custom track) |
| Alignm length: | 490 |
| Alignm identity: | 305 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 481, 141 |
| Conread position: | 37-471 |
| Cow position: | chr13:22124784-22125218 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 264 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 37, 25 |
| Conread position: | 63-509 |
| Cow position: | chr13:56333513-56333959 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 267 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 413, 409 |
| Conread position: | 83-534 |
| Cow position: | chr13:56292712-56292253 (view UCSC Genome Browser custom track) |
| Alignm length: | 462 |
| Alignm identity: | 277 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 66, 57 |
| Conread position: | 94-399 |
| Cow position: | chr13:24162483-24162788 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 200 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 90, 99 |
| Conread position: | 94-406 |
| Cow position: | chr13:22125345-22125657 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 189 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 97-406 |
| Cow position: | chr13:22124760-22125069 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 198 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 87, 96 |
| Conread position: | 112-484 |
| Cow position: | chr13:22124691-22125063 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 221 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 125, 114 |
| Conread position: | 112-510 |
| Cow position: | chr13:24162417-24162815 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 246 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 125, 114 |
| Conread position: | 215-520 |
| Cow position: | chr13:56292827-56292524 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 195 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 255, 52 |
Show alignments to all cow chromosomes.