Cow genome map


           Conread name:
           Ss1.1-rdbla0134_b19.5
        

               Conread position:
               1-252
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               65, 55
               

               Conread position:
               1-437
               

               Cow position:
               
               

               Alignm length:
               441
               

               Alignm identity:
               261
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               295, 64
               

               Conread position:
               1-483
               

               Cow position:
               
               

               Alignm length:
               484
               

               Alignm identity:
               321
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               324, 107
               

               Conread position:
               1-499
               

               Cow position:
               
               

               Alignm length:
               500
               

               Alignm identity:
               353
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               327, 312
               

               Conread position:
               1-510
               

               Cow position:
               
               

               Alignm length:
               513
               

               Alignm identity:
               316
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               258, 266
               

               Conread position:
               1-520
               

               Cow position:
               
               

               Alignm length:
               524
               

               Alignm identity:
               350
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               305, 372
               

               Conread position:
               3-462
               

               Cow position:
               
               

               Alignm length:
               462
               

               Alignm identity:
               292
               

               Alignm E-value:
               7.00649e-45
               

               Alignm gaps (pig, cow):
               226, 233
               

               Conread position:
               3-469
               

               Cow position:
               
               

               Alignm length:
               470
               

               Alignm identity:
               305
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               168, 184
               

               Conread position:
               3-499
               

               Cow position:
               
               

               Alignm length:
               499
               

               Alignm identity:
               327
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               322, 88
               

               Conread position:
               3-509
               

               Cow position:
               
               

               Alignm length:
               511
               

               Alignm identity:
               357
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               145, 150
               

               Conread position:
               3-511
               

               Cow position:
               
               

               Alignm length:
               509
               

               Alignm identity:
               330
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               187, 0
               

               Conread position:
               3-511
               

               Cow position:
               
               

               Alignm length:
               511
               

               Alignm identity:
               357
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               160, 168
               

               Conread position:
               3-522
               

               Cow position:
               
               

               Alignm length:
               522
               

               Alignm identity:
               348
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               304, 94
               

               Conread position:
               3-554
               

               Cow position:
               
               

               Alignm length:
               558
               

               Alignm identity:
               382
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               510, 0
               

               Conread position:
               4-398
               

               Cow position:
               
               

               Alignm length:
               399
               

               Alignm identity:
               251
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               68, 72
               

               Conread position:
               4-428
               

               Cow position:
               
               

               Alignm length:
               428
               

               Alignm identity:
               278
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               73, 63
               

               Conread position:
               4-461
               

               Cow position:
               
               

               Alignm length:
               462
               

               Alignm identity:
               285
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               42, 64
               

               Conread position:
               4-462
               

               Cow position:
               
               

               Alignm length:
               461
               

               Alignm identity:
               281
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               321, 299
               

               Conread position:
               4-465
               

               Cow position:
               
               

               Alignm length:
               467
               

               Alignm identity:
               300
               

               Alignm E-value:
               7.00649e-45
               

               Alignm gaps (pig, cow):
               76, 56
               

               Conread position:
               4-471
               

               Cow position:
               
               

               Alignm length:
               471
               

               Alignm identity:
               286
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               73, 51
               

               Conread position:
               4-498
               

               Cow position:
               
               

               Alignm length:
               497
               

               Alignm identity:
               324
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               306, 19
               

               Conread position:
               4-498
               

               Cow position:
               
               

               Alignm length:
               497
               

               Alignm identity:
               325
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               321, 304
               

               Conread position:
               4-520
               

               Cow position:
               
               

               Alignm length:
               520
               

               Alignm identity:
               321
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               324, 299
               

               Conread position:
               4-523
               

               Cow position:
               
               

               Alignm length:
               522
               

               Alignm identity:
               353
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 83
               

               Conread position:
               4-595
               

               Cow position:
               
               

               Alignm length:
               601
               

               Alignm identity:
               358
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               325, 294
               

               Conread position:
               7-364
               

               Cow position:
               
               

               Alignm length:
               361
               

               Alignm identity:
               242
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               75, 30
               

               Conread position:
               13-277
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               173
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               16-511
               

               Cow position:
               
               

               Alignm length:
               499
               

               Alignm identity:
               333
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               168, 8
               

               Conread position:
               26-509
               

               Cow position:
               
               

               Alignm length:
               486
               

               Alignm identity:
               306
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               137, 59
               

               Conread position:
               28-462
               

               Cow position:
               
               

               Alignm length:
               436
               

               Alignm identity:
               260
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               255, 260
               

               Conread position:
               28-471
               

               Cow position:
               
               

               Alignm length:
               444
               

               Alignm identity:
               263
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               34-461
               

               Cow position:
               
               

               Alignm length:
               431
               

               Alignm identity:
               268
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               105, 119
               

               Conread position:
               36-465
               

               Cow position:
               
               

               Alignm length:
               436
               

               Alignm identity:
               267
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               7, 14
               

               Conread position:
               37-474
               

               Cow position:
               
               

               Alignm length:
               440
               

               Alignm identity:
               276
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               261, 271
               

               Conread position:
               64-464
               

               Cow position:
               
               

               Alignm length:
               405
               

               Alignm identity:
               249
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               100, 109
               

               Conread position:
               74-511
               

               Cow position:
               
               

               Alignm length:
               438
               

               Alignm identity:
               314
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               100-500
               

               Cow position:
               
               

               Alignm length:
               405
               

               Alignm identity:
               243
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               219, 203
               

               Conread position:
               112-425
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               200
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               139, 135
               

               Conread position:
               126-471
               

               Cow position:
               
               

               Alignm length:
               349
               

               Alignm identity:
               220
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               35, 15
               
Show alignments to all cow chromosomes.