Cow genome map


           Conread name:
           Ss1.1-rdbla0134_b19.5
        

               Conread position:
               1-439
               

               Cow position:
               chr21:34222979-34222541 (view UCSC Genome Browser custom track)
               

               Alignm length:
               444
               

               Alignm identity:
               282
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               69, 55
               

               Conread position:
               4-471
               

               Cow position:
               chr21:12608854-12608387 (view UCSC Genome Browser custom track)
               

               Alignm length:
               469
               

               Alignm identity:
               282
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               321, 299
               

               Conread position:
               4-478
               

               Cow position:
               chr21:12659160-12659634 (view UCSC Genome Browser custom track)
               

               Alignm length:
               479
               

               Alignm identity:
               280
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               65, 56
               

               Conread position:
               4-489
               

               Cow position:
               chr21:12659412-12659897 (view UCSC Genome Browser custom track)
               

               Alignm length:
               491
               

               Alignm identity:
               287
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               310, 299
               

               Conread position:
               4-510
               

               Cow position:
               chr21:12608434-12607928 (view UCSC Genome Browser custom track)
               

               Alignm length:
               512
               

               Alignm identity:
               306
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               25, 20
               

               Conread position:
               16-511
               

               Cow position:
               chr21:34223048-34222553 (view UCSC Genome Browser custom track)
               

               Alignm length:
               498
               

               Alignm identity:
               301
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               310, 278
               

               Conread position:
               34-516
               

               Cow position:
               chr21:12608908-12608426 (view UCSC Genome Browser custom track)
               

               Alignm length:
               487
               

               Alignm identity:
               298
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               105, 109
               

               Conread position:
               67-450
               

               Cow position:
               chr21:12659391-12659774 (view UCSC Genome Browser custom track)
               

               Alignm length:
               386
               

               Alignm identity:
               232
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               170, 165
               

               Conread position:
               83-471
               

               Cow position:
               chr21:12608439-12608051 (view UCSC Genome Browser custom track)
               

               Alignm length:
               391
               

               Alignm identity:
               235
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               114, 109
               

               Conread position:
               84-511
               

               Cow position:
               chr21:34223064-34222637 (view UCSC Genome Browser custom track)
               

               Alignm length:
               429
               

               Alignm identity:
               268
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               168, 163
               

               Conread position:
               94-471
               

               Cow position:
               chr21:12608512-12608135 (view UCSC Genome Browser custom track)
               

               Alignm length:
               380
               

               Alignm identity:
               226
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               212, 201
               

               Conread position:
               165-520
               

               Cow position:
               chr21:34223148-34222796 (view UCSC Genome Browser custom track)
               

               Alignm length:
               362
               

               Alignm identity:
               225
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               35, 52
               
Show alignments to all cow chromosomes.