Cow genome map
| Conread name: | Ss1.1-rdbla0134_b19.5 |
| Conread position: | 1-277 |
| Cow position: | chr24:17070783-17071059 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 174 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 66, 56 |
| Conread position: | 1-291 |
| Cow position: | chr24:17013236-17013525 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 183 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 76, 58 |
| Conread position: | 1-360 |
| Cow position: | chr24:17070699-17071058 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 235 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 319, 292 |
| Conread position: | 1-433 |
| Cow position: | chr24:17070615-17071047 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 283 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 328, 318 |
| Conread position: | 1-446 |
| Cow position: | chr24:17035382-17034937 (view UCSC Genome Browser custom track) |
| Alignm length: | 449 |
| Alignm identity: | 265 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 138, 142 |
| Conread position: | 1-466 |
| Cow position: | chr24:17077937-17077473 (view UCSC Genome Browser custom track) |
| Alignm length: | 468 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 75 |
| Conread position: | 1-471 |
| Cow position: | chr24:17078021-17077551 (view UCSC Genome Browser custom track) |
| Alignm length: | 474 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 302, 328 |
| Conread position: | 1-488 |
| Cow position: | chr24:17078273-17077786 (view UCSC Genome Browser custom track) |
| Alignm length: | 488 |
| Alignm identity: | 272 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-489 |
| Cow position: | chr24:17035802-17035314 (view UCSC Genome Browser custom track) |
| Alignm length: | 490 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 325, 317 |
| Conread position: | 1-489 |
| Cow position: | chr24:17078105-17077617 (view UCSC Genome Browser custom track) |
| Alignm length: | 493 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 138, 142 |
| Conread position: | 1-499 |
| Cow position: | chr24:17035718-17035220 (view UCSC Genome Browser custom track) |
| Alignm length: | 499 |
| Alignm identity: | 310 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-511 |
| Cow position: | chr24:17036054-17035544 (view UCSC Genome Browser custom track) |
| Alignm length: | 512 |
| Alignm identity: | 315 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 138, 142 |
| Conread position: | 1-511 |
| Cow position: | chr24:17036138-17035628 (view UCSC Genome Browser custom track) |
| Alignm length: | 513 |
| Alignm identity: | 318 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 138, 142 |
| Conread position: | 1-511 |
| Cow position: | chr24:17036306-17035796 (view UCSC Genome Browser custom track) |
| Alignm length: | 512 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 138, 142 |
| Conread position: | 1-511 |
| Cow position: | chr24:17036474-17035964 (view UCSC Genome Browser custom track) |
| Alignm length: | 512 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 138, 142 |
| Conread position: | 1-511 |
| Cow position: | chr24:17070531-17071041 (view UCSC Genome Browser custom track) |
| Alignm length: | 514 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 305, 293 |
| Conread position: | 1-519 |
| Cow position: | chr24:17035634-17035114 (view UCSC Genome Browser custom track) |
| Alignm length: | 522 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 306, 292 |
| Conread position: | 1-520 |
| Cow position: | chr24:17035886-17035367 (view UCSC Genome Browser custom track) |
| Alignm length: | 520 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 4-440 |
| Cow position: | chr24:17035463-17035027 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 269 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 135, 139 |
| Conread position: | 4-511 |
| Cow position: | chr24:17036387-17035880 (view UCSC Genome Browser custom track) |
| Alignm length: | 509 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 136, 142 |
| Conread position: | 6-511 |
| Cow position: | chr24:17070368-17070873 (view UCSC Genome Browser custom track) |
| Alignm length: | 508 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 65 |
| Conread position: | 11-407 |
| Cow position: | chr24:17013162-17013558 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 241 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 45, 56 |
| Conread position: | 15-484 |
| Cow position: | chr24:17070461-17070930 (view UCSC Genome Browser custom track) |
| Alignm length: | 472 |
| Alignm identity: | 316 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 383, 377 |
| Conread position: | 16-499 |
| Cow position: | chr24:17036543-17036060 (view UCSC Genome Browser custom track) |
| Alignm length: | 487 |
| Alignm identity: | 304 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 312, 277 |
| Conread position: | 33-523 |
| Cow position: | chr24:17036607-17036118 (view UCSC Genome Browser custom track) |
| Alignm length: | 495 |
| Alignm identity: | 306 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 432, 61 |
| Conread position: | 37-511 |
| Cow position: | chr24:17078153-17077679 (view UCSC Genome Browser custom track) |
| Alignm length: | 475 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 67-470 |
| Cow position: | chr24:17078291-17077888 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 229 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 118-459 |
| Cow position: | chr24:17013185-17013525 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 212 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 21, 25 |
| Conread position: | 235-512 |
| Cow position: | chr24:17013218-17013495 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 181 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 77, 85 |
| Conread position: | 248-489 |
| Cow position: | chr24:17013147-17013388 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 151, 142 |
Show alignments to all cow chromosomes.