Cow genome map


           Conread name:
           Ss1.1-rdbla0134_b19.5
        

               Conread position:
               1-211
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               138
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-269
               

               Cow position:
               
               

               Alignm length:
               271
               

               Alignm identity:
               172
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               82, 78
               

               Conread position:
               1-297
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               190
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               70, 82
               

               Conread position:
               1-336
               

               Cow position:
               
               

               Alignm length:
               339
               

               Alignm identity:
               207
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               74, 63
               

               Conread position:
               1-351
               

               Cow position:
               
               

               Alignm length:
               351
               

               Alignm identity:
               222
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-425
               

               Cow position:
               
               

               Alignm length:
               425
               

               Alignm identity:
               275
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-434
               

               Cow position:
               
               

               Alignm length:
               434
               

               Alignm identity:
               281
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-440
               

               Cow position:
               
               

               Alignm length:
               445
               

               Alignm identity:
               269
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               162, 11
               

               Conread position:
               1-446
               

               Cow position:
               
               

               Alignm length:
               451
               

               Alignm identity:
               299
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 59
               

               Conread position:
               1-461
               

               Cow position:
               
               

               Alignm length:
               462
               

               Alignm identity:
               296
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               329, 321
               

               Conread position:
               1-470
               

               Cow position:
               
               

               Alignm length:
               473
               

               Alignm identity:
               299
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               74, 59
               

               Conread position:
               1-474
               

               Cow position:
               
               

               Alignm length:
               474
               

               Alignm identity:
               316
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-484
               

               Cow position:
               
               

               Alignm length:
               485
               

               Alignm identity:
               319
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               328, 317
               

               Conread position:
               1-506
               

               Cow position:
               
               

               Alignm length:
               509
               

               Alignm identity:
               344
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 57
               

               Conread position:
               1-511
               

               Cow position:
               
               

               Alignm length:
               520
               

               Alignm identity:
               318
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               106, 92
               

               Conread position:
               1-511
               

               Cow position:
               
               

               Alignm length:
               512
               

               Alignm identity:
               323
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               409, 391
               

               Conread position:
               1-511
               

               Cow position:
               
               

               Alignm length:
               513
               

               Alignm identity:
               342
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 79
               

               Conread position:
               1-511
               

               Cow position:
               
               

               Alignm length:
               511
               

               Alignm identity:
               324
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-511
               

               Cow position:
               
               

               Alignm length:
               514
               

               Alignm identity:
               341
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 75
               

               Conread position:
               1-520
               

               Cow position:
               
               

               Alignm length:
               524
               

               Alignm identity:
               339
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               162, 167
               

               Conread position:
               1-520
               

               Cow position:
               
               

               Alignm length:
               523
               

               Alignm identity:
               346
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               314, 302
               

               Conread position:
               1-595
               

               Cow position:
               
               

               Alignm length:
               604
               

               Alignm identity:
               387
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               311, 293
               

               Conread position:
               2-465
               

               Cow position:
               
               

               Alignm length:
               466
               

               Alignm identity:
               309
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               79, 86
               

               Conread position:
               2-498
               

               Cow position:
               
               

               Alignm length:
               501
               

               Alignm identity:
               308
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               75, 62
               

               Conread position:
               2-511
               

               Cow position:
               
               

               Alignm length:
               511
               

               Alignm identity:
               319
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               323, 301
               

               Conread position:
               3-320
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               207
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               117, 44
               

               Conread position:
               3-414
               

               Cow position:
               
               

               Alignm length:
               415
               

               Alignm identity:
               271
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 54
               

               Conread position:
               3-464
               

               Cow position:
               
               

               Alignm length:
               464
               

               Alignm identity:
               308
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               303, 291
               

               Conread position:
               3-472
               

               Cow position:
               
               

               Alignm length:
               472
               

               Alignm identity:
               318
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 64
               

               Conread position:
               3-477
               

               Cow position:
               
               

               Alignm length:
               481
               

               Alignm identity:
               300
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               51, 40
               

               Conread position:
               3-499
               

               Cow position:
               
               

               Alignm length:
               498
               

               Alignm identity:
               322
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               322, 315
               

               Conread position:
               3-499
               

               Cow position:
               
               

               Alignm length:
               499
               

               Alignm identity:
               312
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               69, 73
               

               Conread position:
               3-509
               

               Cow position:
               
               

               Alignm length:
               510
               

               Alignm identity:
               343
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 64
               

               Conread position:
               3-510
               

               Cow position:
               
               

               Alignm length:
               509
               

               Alignm identity:
               338
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               409, 405
               

               Conread position:
               3-511
               

               Cow position:
               
               

               Alignm length:
               513
               

               Alignm identity:
               344
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 309
               

               Conread position:
               3-518
               

               Cow position:
               
               

               Alignm length:
               523
               

               Alignm identity:
               337
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               437, 27
               

               Conread position:
               3-544
               

               Cow position:
               
               

               Alignm length:
               546
               

               Alignm identity:
               354
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 73
               

               Conread position:
               4-470
               

               Cow position:
               
               

               Alignm length:
               479
               

               Alignm identity:
               296
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               67, 73
               

               Conread position:
               4-471
               

               Cow position:
               
               

               Alignm length:
               470
               

               Alignm identity:
               274
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               73, 56
               

               Conread position:
               4-474
               

               Cow position:
               
               

               Alignm length:
               473
               

               Alignm identity:
               304
               

               Alignm E-value:
               8.96831e-44
               

               Alignm gaps (pig, cow):
               199, 135
               

               Conread position:
               4-510
               

               Cow position:
               
               

               Alignm length:
               509
               

               Alignm identity:
               347
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               133, 139
               

               Conread position:
               4-511
               

               Cow position:
               
               

               Alignm length:
               512
               

               Alignm identity:
               318
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               79, 75
               

               Conread position:
               4-520
               

               Cow position:
               
               

               Alignm length:
               520
               

               Alignm identity:
               347
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               294, 306
               

               Conread position:
               4-526
               

               Cow position:
               
               

               Alignm length:
               526
               

               Alignm identity:
               333
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               357, 348
               

               Conread position:
               4-578
               

               Cow position:
               
               

               Alignm length:
               582
               

               Alignm identity:
               372
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               294, 304
               

               Conread position:
               5-480
               

               Cow position:
               
               

               Alignm length:
               479
               

               Alignm identity:
               295
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               132, 11
               

               Conread position:
               5-511
               

               Cow position:
               
               

               Alignm length:
               510
               

               Alignm identity:
               319
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               78, 82
               

               Conread position:
               5-519
               

               Cow position:
               
               

               Alignm length:
               520
               

               Alignm identity:
               350
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               320, 92
               

               Conread position:
               6-438
               

               Cow position:
               
               

               Alignm length:
               438
               

               Alignm identity:
               260
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               133, 144
               

               Conread position:
               6-470
               

               Cow position:
               
               

               Alignm length:
               466
               

               Alignm identity:
               300
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               133, 138
               

               Conread position:
               8-426
               

               Cow position:
               
               

               Alignm length:
               422
               

               Alignm identity:
               250
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               54, 47
               

               Conread position:
               8-500
               

               Cow position:
               
               

               Alignm length:
               493
               

               Alignm identity:
               322
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               9-580
               

               Cow position:
               
               

               Alignm length:
               580
               

               Alignm identity:
               353
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               80, 72
               

               Conread position:
               10-471
               

               Cow position:
               
               

               Alignm length:
               464
               

               Alignm identity:
               293
               

               Alignm E-value:
               8.96831e-44
               

               Alignm gaps (pig, cow):
               300, 191
               

               Conread position:
               10-473
               

               Cow position:
               
               

               Alignm length:
               468
               

               Alignm identity:
               306
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               5, 134
               

               Conread position:
               10-482
               

               Cow position:
               
               

               Alignm length:
               475
               

               Alignm identity:
               325
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 308
               

               Conread position:
               16-511
               

               Cow position:
               
               

               Alignm length:
               499
               

               Alignm identity:
               333
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               213, 219
               

               Conread position:
               16-519
               

               Cow position:
               
               

               Alignm length:
               509
               

               Alignm identity:
               307
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               60, 42
               

               Conread position:
               16-519
               

               Cow position:
               
               

               Alignm length:
               506
               

               Alignm identity:
               332
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               490, 0
               

               Conread position:
               28-499
               

               Cow position:
               
               

               Alignm length:
               474
               

               Alignm identity:
               298
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 69
               

               Conread position:
               30-511
               

               Cow position:
               
               

               Alignm length:
               484
               

               Alignm identity:
               319
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               109, 120
               

               Conread position:
               32-434
               

               Cow position:
               
               

               Alignm length:
               405
               

               Alignm identity:
               250
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               297, 271
               

               Conread position:
               33-471
               

               Cow position:
               
               

               Alignm length:
               442
               

               Alignm identity:
               285
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               289, 270
               

               Conread position:
               33-471
               

               Cow position:
               
               

               Alignm length:
               442
               

               Alignm identity:
               271
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               39, 80
               

               Conread position:
               34-383
               

               Cow position:
               
               

               Alignm length:
               351
               

               Alignm identity:
               211
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               316, 309
               

               Conread position:
               48-465
               

               Cow position:
               
               

               Alignm length:
               421
               

               Alignm identity:
               257
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               53, 60
               

               Conread position:
               67-399
               

               Cow position:
               
               

               Alignm length:
               337
               

               Alignm identity:
               212
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               72, 93
               

               Conread position:
               67-478
               

               Cow position:
               
               

               Alignm length:
               413
               

               Alignm identity:
               265
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               248, 236
               

               Conread position:
               74-499
               

               Cow position:
               
               

               Alignm length:
               429
               

               Alignm identity:
               257
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               5, 70
               

               Conread position:
               75-511
               

               Cow position:
               
               

               Alignm length:
               440
               

               Alignm identity:
               262
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               220, 104
               

               Conread position:
               80-473
               

               Cow position:
               
               

               Alignm length:
               397
               

               Alignm identity:
               252
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               15, 238
               

               Conread position:
               88-509
               

               Cow position:
               
               

               Alignm length:
               427
               

               Alignm identity:
               270
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               20, 45
               

               Conread position:
               90-420
               

               Cow position:
               
               

               Alignm length:
               332
               

               Alignm identity:
               207
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               60, 49
               

               Conread position:
               90-517
               

               Cow position:
               
               

               Alignm length:
               429
               

               Alignm identity:
               267
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               419, 409
               

               Conread position:
               97-465
               

               Cow position:
               
               

               Alignm length:
               371
               

               Alignm identity:
               228
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               202, 213
               

               Conread position:
               97-474
               

               Cow position:
               
               

               Alignm length:
               381
               

               Alignm identity:
               235
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               116, 112
               

               Conread position:
               100-520
               

               Cow position:
               
               

               Alignm length:
               421
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               121-451
               

               Cow position:
               
               

               Alignm length:
               337
               

               Alignm identity:
               220
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               18, 29
               

               Conread position:
               121-516
               

               Cow position:
               
               

               Alignm length:
               402
               

               Alignm identity:
               246
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               71, 96
               

               Conread position:
               158-471
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               208
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               165-475
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               198
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               170-510
               

               Cow position:
               
               

               Alignm length:
               341
               

               Alignm identity:
               219
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               187-513
               

               Cow position:
               
               

               Alignm length:
               329
               

               Alignm identity:
               208
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               107, 125
               

               Conread position:
               210-540
               

               Cow position:
               
               

               Alignm length:
               335
               

               Alignm identity:
               217
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               89, 109
               

               Conread position:
               229-469
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               229-511
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               182
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               141, 179
               

               Conread position:
               235-509
               

               Cow position:
               
               

               Alignm length:
               276
               

               Alignm identity:
               177
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               48, 53
               

               Conread position:
               238-520
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               188
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               68, 77
               

               Conread position:
               349-520
               

               Cow position:
               
               

               Alignm length:
               174
               

               Alignm identity:
               121
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               155, 0
               
Show alignments to all cow chromosomes.