Cow genome map
Conread name: | Ss1.1-rdbla0134_b19.5 |
Conread position: | 1-211 |
Cow position: | chr25:34769464-34769254 (view UCSC Genome Browser custom track) |
Alignm length: | 211 |
Alignm identity: | 138 |
Alignm E-value: | 8e-22 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 1-269 |
Cow position: | chr25:36801699-36801967 (view UCSC Genome Browser custom track) |
Alignm length: | 271 |
Alignm identity: | 172 |
Alignm E-value: | 8e-22 |
Alignm gaps (pig, cow): | 82, 78 |
Conread position: | 1-297 |
Cow position: | chr25:33157065-33156770 (view UCSC Genome Browser custom track) |
Alignm length: | 299 |
Alignm identity: | 190 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 70, 82 |
Conread position: | 1-336 |
Cow position: | chr25:33145086-33145421 (view UCSC Genome Browser custom track) |
Alignm length: | 339 |
Alignm identity: | 207 |
Alignm E-value: | 7e-21 |
Alignm gaps (pig, cow): | 74, 63 |
Conread position: | 1-351 |
Cow position: | chr25:33127874-33128224 (view UCSC Genome Browser custom track) |
Alignm length: | 351 |
Alignm identity: | 222 |
Alignm E-value: | 3e-35 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 1-425 |
Cow position: | chr25:23420455-23420879 (view UCSC Genome Browser custom track) |
Alignm length: | 425 |
Alignm identity: | 275 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 1-434 |
Cow position: | chr25:33127790-33128223 (view UCSC Genome Browser custom track) |
Alignm length: | 434 |
Alignm identity: | 281 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 1-440 |
Cow position: | chr25:34433596-34434029 (view UCSC Genome Browser custom track) |
Alignm length: | 445 |
Alignm identity: | 269 |
Alignm E-value: | 9e-23 |
Alignm gaps (pig, cow): | 162, 11 |
Conread position: | 1-446 |
Cow position: | chr25:33157233-33156788 (view UCSC Genome Browser custom track) |
Alignm length: | 451 |
Alignm identity: | 299 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 68, 59 |
Conread position: | 1-461 |
Cow position: | chr25:33157401-33156941 (view UCSC Genome Browser custom track) |
Alignm length: | 462 |
Alignm identity: | 296 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 329, 321 |
Conread position: | 1-470 |
Cow position: | chr25:33157317-33156848 (view UCSC Genome Browser custom track) |
Alignm length: | 473 |
Alignm identity: | 299 |
Alignm E-value: | 2.8026e-45 |
Alignm gaps (pig, cow): | 74, 59 |
Conread position: | 1-474 |
Cow position: | chr25:34769968-34769495 (view UCSC Genome Browser custom track) |
Alignm length: | 474 |
Alignm identity: | 316 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 1-484 |
Cow position: | chr25:34447262-34447743 (view UCSC Genome Browser custom track) |
Alignm length: | 485 |
Alignm identity: | 319 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 328, 317 |
Conread position: | 1-506 |
Cow position: | chr25:33299391-33299889 (view UCSC Genome Browser custom track) |
Alignm length: | 509 |
Alignm identity: | 344 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 51, 57 |
Conread position: | 1-511 |
Cow position: | chr25:326737-327253 (view UCSC Genome Browser custom track) |
Alignm length: | 520 |
Alignm identity: | 318 |
Alignm E-value: | 3e-35 |
Alignm gaps (pig, cow): | 106, 92 |
Conread position: | 1-511 |
Cow position: | chr25:34447094-34447604 (view UCSC Genome Browser custom track) |
Alignm length: | 512 |
Alignm identity: | 323 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 409, 391 |
Conread position: | 1-511 |
Cow position: | chr25:34769884-34769374 (view UCSC Genome Browser custom track) |
Alignm length: | 513 |
Alignm identity: | 342 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 55, 79 |
Conread position: | 1-511 |
Cow position: | chr25:34770052-34769542 (view UCSC Genome Browser custom track) |
Alignm length: | 511 |
Alignm identity: | 324 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 1-511 |
Cow position: | chr25:34770136-34769626 (view UCSC Genome Browser custom track) |
Alignm length: | 514 |
Alignm identity: | 341 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 54, 75 |
Conread position: | 1-520 |
Cow position: | chr25:34447010-34447529 (view UCSC Genome Browser custom track) |
Alignm length: | 524 |
Alignm identity: | 339 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 162, 167 |
Conread position: | 1-520 |
Cow position: | chr25:34769800-34769279 (view UCSC Genome Browser custom track) |
Alignm length: | 523 |
Alignm identity: | 346 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 314, 302 |
Conread position: | 1-595 |
Cow position: | chr25:33298971-33299570 (view UCSC Genome Browser custom track) |
Alignm length: | 604 |
Alignm identity: | 387 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 311, 293 |
Conread position: | 2-465 |
Cow position: | chr25:36801448-36801911 (view UCSC Genome Browser custom track) |
Alignm length: | 466 |
Alignm identity: | 309 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 79, 86 |
Conread position: | 2-498 |
Cow position: | chr25:34713939-34714435 (view UCSC Genome Browser custom track) |
Alignm length: | 501 |
Alignm identity: | 308 |
Alignm E-value: | 5e-38 |
Alignm gaps (pig, cow): | 75, 62 |
Conread position: | 2-511 |
Cow position: | chr25:33127707-33128216 (view UCSC Genome Browser custom track) |
Alignm length: | 511 |
Alignm identity: | 319 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 323, 301 |
Conread position: | 3-320 |
Cow position: | chr25:33305161-33304849 (view UCSC Genome Browser custom track) |
Alignm length: | 320 |
Alignm identity: | 207 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 117, 44 |
Conread position: | 3-414 |
Cow position: | chr25:34769630-34769219 (view UCSC Genome Browser custom track) |
Alignm length: | 415 |
Alignm identity: | 271 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 72, 54 |
Conread position: | 3-464 |
Cow position: | chr25:36800873-36801334 (view UCSC Genome Browser custom track) |
Alignm length: | 464 |
Alignm identity: | 308 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 303, 291 |
Conread position: | 3-472 |
Cow position: | chr25:36800705-36801174 (view UCSC Genome Browser custom track) |
Alignm length: | 472 |
Alignm identity: | 318 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 49, 64 |
Conread position: | 3-477 |
Cow position: | chr25:34714024-34714498 (view UCSC Genome Browser custom track) |
Alignm length: | 481 |
Alignm identity: | 300 |
Alignm E-value: | 1e-36 |
Alignm gaps (pig, cow): | 51, 40 |
Conread position: | 3-499 |
Cow position: | chr25:33299141-33299637 (view UCSC Genome Browser custom track) |
Alignm length: | 498 |
Alignm identity: | 322 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 322, 315 |
Conread position: | 3-499 |
Cow position: | chr25:36801209-36801693 (view UCSC Genome Browser custom track) |
Alignm length: | 499 |
Alignm identity: | 312 |
Alignm E-value: | 2e-38 |
Alignm gaps (pig, cow): | 69, 73 |
Conread position: | 3-509 |
Cow position: | chr25:33298637-33299143 (view UCSC Genome Browser custom track) |
Alignm length: | 510 |
Alignm identity: | 343 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 49, 64 |
Conread position: | 3-510 |
Cow position: | chr25:33298805-33299312 (view UCSC Genome Browser custom track) |
Alignm length: | 509 |
Alignm identity: | 338 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 409, 405 |
Conread position: | 3-511 |
Cow position: | chr25:36800619-36801129 (view UCSC Genome Browser custom track) |
Alignm length: | 513 |
Alignm identity: | 344 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 8, 309 |
Conread position: | 3-518 |
Cow position: | chr25:33305972-33305460 (view UCSC Genome Browser custom track) |
Alignm length: | 523 |
Alignm identity: | 337 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 437, 27 |
Conread position: | 3-544 |
Cow position: | chr25:33299309-33299851 (view UCSC Genome Browser custom track) |
Alignm length: | 546 |
Alignm identity: | 354 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 49, 73 |
Conread position: | 4-470 |
Cow position: | chr25:326572-327044 (view UCSC Genome Browser custom track) |
Alignm length: | 479 |
Alignm identity: | 296 |
Alignm E-value: | 2e-30 |
Alignm gaps (pig, cow): | 67, 73 |
Conread position: | 4-471 |
Cow position: | chr25:25652347-25652814 (view UCSC Genome Browser custom track) |
Alignm length: | 470 |
Alignm identity: | 274 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 73, 56 |
Conread position: | 4-474 |
Cow position: | chr25:33305244-33304784 (view UCSC Genome Browser custom track) |
Alignm length: | 473 |
Alignm identity: | 304 |
Alignm E-value: | 8.96831e-44 |
Alignm gaps (pig, cow): | 199, 135 |
Conread position: | 4-510 |
Cow position: | chr25:33299226-33299732 (view UCSC Genome Browser custom track) |
Alignm length: | 509 |
Alignm identity: | 347 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 133, 139 |
Conread position: | 4-511 |
Cow position: | chr25:33144924-33145428 (view UCSC Genome Browser custom track) |
Alignm length: | 512 |
Alignm identity: | 318 |
Alignm E-value: | 2e-40 |
Alignm gaps (pig, cow): | 79, 75 |
Conread position: | 4-520 |
Cow position: | chr25:33299058-33299576 (view UCSC Genome Browser custom track) |
Alignm length: | 520 |
Alignm identity: | 347 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 294, 306 |
Conread position: | 4-526 |
Cow position: | chr25:34447181-34447705 (view UCSC Genome Browser custom track) |
Alignm length: | 526 |
Alignm identity: | 333 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 357, 348 |
Conread position: | 4-578 |
Cow position: | chr25:33298722-33299302 (view UCSC Genome Browser custom track) |
Alignm length: | 582 |
Alignm identity: | 372 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 294, 304 |
Conread position: | 5-480 |
Cow position: | chr25:34713860-34714333 (view UCSC Genome Browser custom track) |
Alignm length: | 479 |
Alignm identity: | 295 |
Alignm E-value: | 4e-36 |
Alignm gaps (pig, cow): | 132, 11 |
Conread position: | 5-511 |
Cow position: | chr25:33305726-33305241 (view UCSC Genome Browser custom track) |
Alignm length: | 510 |
Alignm identity: | 319 |
Alignm E-value: | 3e-33 |
Alignm gaps (pig, cow): | 78, 82 |
Conread position: | 5-519 |
Cow position: | chr25:33305410-33304899 (view UCSC Genome Browser custom track) |
Alignm length: | 520 |
Alignm identity: | 350 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 320, 92 |
Conread position: | 6-438 |
Cow position: | chr25:34732615-34732181 (view UCSC Genome Browser custom track) |
Alignm length: | 438 |
Alignm identity: | 260 |
Alignm E-value: | 9e-23 |
Alignm gaps (pig, cow): | 133, 144 |
Conread position: | 6-470 |
Cow position: | chr25:23420376-23420840 (view UCSC Genome Browser custom track) |
Alignm length: | 466 |
Alignm identity: | 300 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 133, 138 |
Conread position: | 8-426 |
Cow position: | chr25:346443-346861 (view UCSC Genome Browser custom track) |
Alignm length: | 422 |
Alignm identity: | 250 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 54, 47 |
Conread position: | 8-500 |
Cow position: | chr25:33298894-33299386 (view UCSC Genome Browser custom track) |
Alignm length: | 493 |
Alignm identity: | 322 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 9-580 |
Cow position: | chr25:36801371-36801948 (view UCSC Genome Browser custom track) |
Alignm length: | 580 |
Alignm identity: | 353 |
Alignm E-value: | 1.99965e-42 |
Alignm gaps (pig, cow): | 80, 72 |
Conread position: | 10-471 |
Cow position: | chr25:33144846-33145304 (view UCSC Genome Browser custom track) |
Alignm length: | 464 |
Alignm identity: | 293 |
Alignm E-value: | 8.96831e-44 |
Alignm gaps (pig, cow): | 300, 191 |
Conread position: | 10-473 |
Cow position: | chr25:36801539-36802000 (view UCSC Genome Browser custom track) |
Alignm length: | 468 |
Alignm identity: | 306 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 5, 134 |
Conread position: | 10-482 |
Cow position: | chr25:33298559-33299032 (view UCSC Genome Browser custom track) |
Alignm length: | 475 |
Alignm identity: | 325 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 7, 308 |
Conread position: | 16-511 |
Cow position: | chr25:33298482-33298977 (view UCSC Genome Browser custom track) |
Alignm length: | 499 |
Alignm identity: | 333 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 213, 219 |
Conread position: | 16-519 |
Cow position: | chr25:22235832-22236337 (view UCSC Genome Browser custom track) |
Alignm length: | 509 |
Alignm identity: | 307 |
Alignm E-value: | 3e-34 |
Alignm gaps (pig, cow): | 60, 42 |
Conread position: | 16-519 |
Cow position: | chr25:36800802-36801307 (view UCSC Genome Browser custom track) |
Alignm length: | 506 |
Alignm identity: | 332 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 490, 0 |
Conread position: | 28-499 |
Cow position: | chr25:34446953-34447424 (view UCSC Genome Browser custom track) |
Alignm length: | 474 |
Alignm identity: | 298 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 44, 69 |
Conread position: | 30-511 |
Cow position: | chr25:23420316-23420797 (view UCSC Genome Browser custom track) |
Alignm length: | 484 |
Alignm identity: | 319 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 109, 120 |
Conread position: | 32-434 |
Cow position: | chr25:33145033-33145435 (view UCSC Genome Browser custom track) |
Alignm length: | 405 |
Alignm identity: | 250 |
Alignm E-value: | 8e-33 |
Alignm gaps (pig, cow): | 297, 271 |
Conread position: | 33-471 |
Cow position: | chr25:33157453-33157015 (view UCSC Genome Browser custom track) |
Alignm length: | 442 |
Alignm identity: | 285 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 289, 270 |
Conread position: | 33-471 |
Cow position: | chr25:34446874-34447312 (view UCSC Genome Browser custom track) |
Alignm length: | 442 |
Alignm identity: | 271 |
Alignm E-value: | 9e-34 |
Alignm gaps (pig, cow): | 39, 80 |
Conread position: | 34-383 |
Cow position: | chr25:326518-326867 (view UCSC Genome Browser custom track) |
Alignm length: | 351 |
Alignm identity: | 211 |
Alignm E-value: | 9e-23 |
Alignm gaps (pig, cow): | 316, 309 |
Conread position: | 48-465 |
Cow position: | chr25:326448-326865 (view UCSC Genome Browser custom track) |
Alignm length: | 421 |
Alignm identity: | 257 |
Alignm E-value: | 2e-29 |
Alignm gaps (pig, cow): | 53, 60 |
Conread position: | 67-399 |
Cow position: | chr25:18642201-18641866 (view UCSC Genome Browser custom track) |
Alignm length: | 337 |
Alignm identity: | 212 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 72, 93 |
Conread position: | 67-478 |
Cow position: | chr25:33157503-33157092 (view UCSC Genome Browser custom track) |
Alignm length: | 413 |
Alignm identity: | 265 |
Alignm E-value: | 9.80909e-45 |
Alignm gaps (pig, cow): | 248, 236 |
Conread position: | 74-499 |
Cow position: | chr25:34713758-34714184 (view UCSC Genome Browser custom track) |
Alignm length: | 429 |
Alignm identity: | 257 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 5, 70 |
Conread position: | 75-511 |
Cow position: | chr25:34433502-34433934 (view UCSC Genome Browser custom track) |
Alignm length: | 440 |
Alignm identity: | 262 |
Alignm E-value: | 8e-22 |
Alignm gaps (pig, cow): | 220, 104 |
Conread position: | 80-473 |
Cow position: | chr25:36800528-36800923 (view UCSC Genome Browser custom track) |
Alignm length: | 397 |
Alignm identity: | 252 |
Alignm E-value: | 2e-38 |
Alignm gaps (pig, cow): | 15, 238 |
Conread position: | 88-509 |
Cow position: | chr25:326404-326825 (view UCSC Genome Browser custom track) |
Alignm length: | 427 |
Alignm identity: | 270 |
Alignm E-value: | 4e-36 |
Alignm gaps (pig, cow): | 20, 45 |
Conread position: | 90-420 |
Cow position: | chr25:366718-367048 (view UCSC Genome Browser custom track) |
Alignm length: | 332 |
Alignm identity: | 207 |
Alignm E-value: | 5e-28 |
Alignm gaps (pig, cow): | 60, 49 |
Conread position: | 90-517 |
Cow position: | chr25:346441-346868 (view UCSC Genome Browser custom track) |
Alignm length: | 429 |
Alignm identity: | 267 |
Alignm E-value: | 5e-39 |
Alignm gaps (pig, cow): | 419, 409 |
Conread position: | 97-465 |
Cow position: | chr25:22235829-22236197 (view UCSC Genome Browser custom track) |
Alignm length: | 371 |
Alignm identity: | 228 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 202, 213 |
Conread position: | 97-474 |
Cow position: | chr25:36800463-36800840 (view UCSC Genome Browser custom track) |
Alignm length: | 381 |
Alignm identity: | 235 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 116, 112 |
Conread position: | 100-520 |
Cow position: | chr25:33127721-33128141 (view UCSC Genome Browser custom track) |
Alignm length: | 421 |
Alignm identity: | 272 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 121-451 |
Cow position: | chr25:326947-327277 (view UCSC Genome Browser custom track) |
Alignm length: | 337 |
Alignm identity: | 220 |
Alignm E-value: | 6e-30 |
Alignm gaps (pig, cow): | 18, 29 |
Conread position: | 121-516 |
Cow position: | chr25:326353-326748 (view UCSC Genome Browser custom track) |
Alignm length: | 402 |
Alignm identity: | 246 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 71, 96 |
Conread position: | 158-471 |
Cow position: | chr25:34770149-34769834 (view UCSC Genome Browser custom track) |
Alignm length: | 316 |
Alignm identity: | 208 |
Alignm E-value: | 1e-36 |
Alignm gaps (pig, cow): | 22, 0 |
Conread position: | 165-475 |
Cow position: | chr25:33306394-33306093 (view UCSC Genome Browser custom track) |
Alignm length: | 311 |
Alignm identity: | 198 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 52, 0 |
Conread position: | 170-510 |
Cow position: | chr25:33298470-33298808 (view UCSC Genome Browser custom track) |
Alignm length: | 341 |
Alignm identity: | 219 |
Alignm E-value: | 1e-35 |
Alignm gaps (pig, cow): | 16, 0 |
Conread position: | 187-513 |
Cow position: | chr25:34732098-34731772 (view UCSC Genome Browser custom track) |
Alignm length: | 329 |
Alignm identity: | 208 |
Alignm E-value: | 6e-29 |
Alignm gaps (pig, cow): | 107, 125 |
Conread position: | 210-540 |
Cow position: | chr25:23420328-23420660 (view UCSC Genome Browser custom track) |
Alignm length: | 335 |
Alignm identity: | 217 |
Alignm E-value: | 8e-33 |
Alignm gaps (pig, cow): | 89, 109 |
Conread position: | 229-469 |
Cow position: | chr25:34432984-34433224 (view UCSC Genome Browser custom track) |
Alignm length: | 241 |
Alignm identity: | 160 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 229-511 |
Cow position: | chr25:18642207-18641922 (view UCSC Genome Browser custom track) |
Alignm length: | 287 |
Alignm identity: | 182 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 141, 179 |
Conread position: | 235-509 |
Cow position: | chr25:366779-367053 (view UCSC Genome Browser custom track) |
Alignm length: | 276 |
Alignm identity: | 177 |
Alignm E-value: | 4e-26 |
Alignm gaps (pig, cow): | 48, 53 |
Conread position: | 238-520 |
Cow position: | chr25:34770151-34769869 (view UCSC Genome Browser custom track) |
Alignm length: | 284 |
Alignm identity: | 188 |
Alignm E-value: | 8e-33 |
Alignm gaps (pig, cow): | 68, 77 |
Conread position: | 349-520 |
Cow position: | chr25:34433020-34433193 (view UCSC Genome Browser custom track) |
Alignm length: | 174 |
Alignm identity: | 121 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 155, 0 |
Show alignments to all cow chromosomes.