Cow genome map
| Conread name: | Ss1.1-rdbla0134_b19.5 |
| Conread position: | 1-482 |
| Cow position: | chr6:49396203-49396678 (view UCSC Genome Browser custom track) |
| Alignm length: | 483 |
| Alignm identity: | 296 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 372, 24 |
| Conread position: | 1-509 |
| Cow position: | chr6:49340812-49341320 (view UCSC Genome Browser custom track) |
| Alignm length: | 511 |
| Alignm identity: | 346 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 57 |
| Conread position: | 3-404 |
| Cow position: | chr6:49341066-49341465 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 262 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 135, 140 |
| Conread position: | 3-440 |
| Cow position: | chr6:49340982-49341419 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 3-509 |
| Cow position: | chr6:49340730-49341236 (view UCSC Genome Browser custom track) |
| Alignm length: | 509 |
| Alignm identity: | 346 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 317, 296 |
| Conread position: | 3-509 |
| Cow position: | chr6:49340898-49341404 (view UCSC Genome Browser custom track) |
| Alignm length: | 508 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 400, 387 |
| Conread position: | 3-511 |
| Cow position: | chr6:49340478-49340986 (view UCSC Genome Browser custom track) |
| Alignm length: | 511 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 315, 300 |
| Conread position: | 3-511 |
| Cow position: | chr6:49340646-49341154 (view UCSC Genome Browser custom track) |
| Alignm length: | 513 |
| Alignm identity: | 337 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 40 |
| Conread position: | 3-520 |
| Cow position: | chr6:49340394-49340911 (view UCSC Genome Browser custom track) |
| Alignm length: | 519 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 314, 291 |
| Conread position: | 3-520 |
| Cow position: | chr6:49340562-49341079 (view UCSC Genome Browser custom track) |
| Alignm length: | 520 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 136, 140 |
| Conread position: | 4-488 |
| Cow position: | chr6:49428807-49429291 (view UCSC Genome Browser custom track) |
| Alignm length: | 490 |
| Alignm identity: | 289 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 71, 56 |
| Conread position: | 4-521 |
| Cow position: | chr6:49396452-49396971 (view UCSC Genome Browser custom track) |
| Alignm length: | 521 |
| Alignm identity: | 311 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 135, 139 |
| Conread position: | 4-544 |
| Cow position: | chr6:49396284-49396829 (view UCSC Genome Browser custom track) |
| Alignm length: | 549 |
| Alignm identity: | 335 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 135, 139 |
| Conread position: | 82-470 |
| Cow position: | chr6:49340389-49340777 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 250 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 239, 230 |
| Conread position: | 94-471 |
| Cow position: | chr6:49428981-49429358 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 223 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 94-478 |
| Cow position: | chr6:49428561-49428945 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 239 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 70, 93 |
| Conread position: | 119-509 |
| Cow position: | chr6:49340345-49340732 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 252 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 201, 18 |
| Conread position: | 121-489 |
| Cow position: | chr6:49396233-49396601 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 223 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 336, 330 |
| Conread position: | 244-499 |
| Cow position: | chr6:49396194-49396443 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 81, 34 |
Show alignments to all cow chromosomes.